New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	4638995 =	30 (0.760)	3 (0.080)	3/270	5.5	9.6%	coding (836/1353 nt)	creD	inner membrane protein
	?	NC_000913_3_hsa_tpiA	4639013 =	28 (0.750)					coding (854/1353 nt)	creD	inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCT  >  NC_000913_3_hsa_tpiA/4638846‑4639142                                                                                                                                                      |                                                                                                                                                    cAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAg                                                                                                                                                     >  1:238522/1‑150 (MQ=255)  cgTTTTTTAGGTTAGTGTGAATCGGCAAAACGGTAAGTTAGTGAGCTTGGTTTTCAGGCGGACTGGCAACGCAGCTGGTTTGCTAATAATCTCGGTGAGAGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGc                                                                                                                                                    <  2:240537/149‑1 (MQ=255)            gTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTaa                                                                                                                                          >  1:221703/1‑150 (MQ=255)            gTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTaa                                                                                                                                          >  1:551668/1‑150 (MQ=255)                 tttCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAacgacg                                                                                                                                     >  1:52038/1‑150 (MQ=255)                  ttCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGc                                                                                                                                    <  2:129584/150‑1 (MQ=255)                             aaaCGGGAAGTTAGCGAGTCTGGTTTTCAGGCGCCCTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCACTGATACCGGCTGGGACATCATCCCAGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCaa                                                                                                                         >  2:544732/1‑150 (MQ=255)                             aaaCGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCaa                                                                                                                         >  1:369130/1‑150 (MQ=255)                                   gAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGACTGAGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGCTCAATACCaa                                                                                                                   >  2:438022/1‑150 (MQ=255)                                       ttAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTaa                                                                                                               >  2:75738/1‑150 (MQ=255)                                               tCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTCATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGACCAATACCCATTAACTAACCgg                                                                                                       >  2:5454/1‑150 (MQ=255)                                                       tCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGCGAGCTGTTTGCTTAAGAAAGAGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTaa                                                                                               >  1:508712/1‑150 (MQ=255)                                                          ggcctagtGGCAAAGCAGCTGGTTTCCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTa                                                                                            <  1:5454/143‑1 (MQ=255)                                                                   gCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGATTCAGGCAATGATACCGGCTGGGGAAACTTCCCGGCGTTTAGCGTCGCAGTAACGCCGCCAGCAGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTct                                                                                   >  2:652631/1‑150 (MQ=255)                                                                          agcTGGTTTGCTAATAATCTCGGTGAGCGTTTCGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCCGAAACGACGCCAACCGATCAATCCCACTTACCTGACCGGGCGGCTACGTACGCCATTCTGCTGCtt                                                                            >  2:109117/1‑150 (MQ=255)                                                                            cTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGc                                                                          >  2:465373/1‑150 (MQ=255)                                                                               gTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGCTTGCACt                                                                       >  1:500303/1‑150 (MQ=255)                                                                                      aataatCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACtttt                                                                >  2:445320/1‑150 (MQ=255)                                                                                       ataatCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTa                                                               <  1:75738/150‑1 (MQ=255)                                                                                                gTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTTGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCt                                                      <  2:221703/150‑1 (MQ=255)                                                                                                    gCGTTTTGCTTCAGGGAATGATGCCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGGAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTGTATGGCGTTCTgtgt                                                  <  2:511960/150‑1 (MQ=255)                                                                                                        tttGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCCCGTACTTTTATGGCGTTCTTTGgtttt                                              >  2:4871/1‑150 (MQ=255)                                                                                                                    aaagATACCGGCTGAGACACCCTCCGGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCAcc                                  <  1:124387/147‑1 (MQ=255)                                                                                                                                  ggAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGTCGATCAATCCCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTTCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTaca                    <  1:438022/150‑1 (MQ=255)                                                                                                                                  ggAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTaca                    <  1:185124/150‑1 (MQ=255)                                                                                                                                   gAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTGTGCTGATTGCACTGACTTTTATGGCGTTTTTTGTTTTTGAAACGCTCACCGCGCAACGTTTagac                   >  1:357591/1‑150 (MQ=255)                                                                                                                                        cgtCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAAt              <  2:551668/148‑1 (MQ=255)                                                                                                                                            ccGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGACGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCaa          >  1:540807/1‑150 (MQ=255)                                                                                                                                              ggCGTTTAGCGTTGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAata        >  2:674495/1‑150 (MQ=255)                                                                                                                                                    tAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCt  <  1:465373/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCT  >  NC_000913_3_hsa_tpiA/4638846‑4639142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.