New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_hsa_tpiA | = 2296690 | 38 (0.970) | 4 (0.110) | 4/272 | 5.0 | 9.8% | coding (335/663 nt) | ccmB | heme export ABC transporter permease |
? | NC_000913_3_hsa_tpiA | = 2296727 | 37 (0.980) | coding (298/663 nt) | ccmB | heme export ABC transporter permease | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAACCCAGATAATGCCCGGTG > NC_000913_3_hsa_tpiA/2296584‑2296876 | gCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGCCAGACCCATTACCATCCAACGCGCCac > 2:180977/1‑149 (MQ=255) cccGGTGCACCGGGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAAAGGCAGACCGGTTACCATCCAGTGCGCCATc < 2:209060/150‑1 (MQ=255) ccGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATcc > 1:562429/1‑149 (MQ=255) gTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCCGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACCTCCATTCCCAGTAGCATTGCTACCAGTCGCGAAAGGATCAGTACCGGCCGACCGGCTCCCATCCAGTGCGCCCTCAccc > 2:403361/1‑149 (MQ=255) aCCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCCCCTTCGc > 1:483280/1‑150 (MQ=255) cGAGAAAGCCAAGCGTAGGCGGTCCCAGCAGCAGCGGCAGCGCCATCACGTGACAGCCATAAAGATTCATTCCCAGTAGCATTGCTTCCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCa < 2:347557/150‑1 (MQ=255) aaggctAGGCGTTCCCAGCAGCAGCGTCCGCGCCATCACTTGCCAGCCATAAACAGCCATTCCCAGAAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACATTCGCTAGCACAAcggc < 2:427841/145‑1 (MQ=255) gCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGGCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCAAGCACAAcggcgg > 1:344501/1‑150 (MQ=255) ggCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAg < 1:32394/150‑1 (MQ=255) gCGTTCCCAGCAGCCGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGGAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCACCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAgg < 1:139004/150‑1 (MQ=255) gCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAgg > 2:282017/1‑150 (MQ=255) gCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAgg < 1:416318/150‑1 (MQ=255) gTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAg < 2:135348/131‑1 (MQ=255) gTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAg > 1:135348/1‑131 (MQ=255) ccAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACACCGGCCGGCAAGGGTaaag > 1:223169/1‑148 (MQ=255) ccAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTACCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACg > 2:617274/1‑150 (MQ=255) cagcagcagCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACgg > 2:470649/1‑150 (MQ=255) cagcGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGcaacaa > 1:392271/1‑150 (MQ=255) gcCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGt < 2:562429/150‑1 (MQ=255) gcCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATCGt > 1:325422/1‑150 (MQ=255) cTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGCCCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGAc > 1:374521/1‑150 (MQ=255) caTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCt < 1:520941/150‑1 (MQ=255) aTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCAGCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTg < 1:51403/150‑1 (MQ=255) cATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACCACGGCGGGCAAGAGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCATGCaaaa > 1:608319/1‑149 (MQ=255) aGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCCACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAAc > 2:43228/1‑150 (MQ=255) aGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGCAc > 2:127244/1‑150 (MQ=255) gCATTGCTACCAGTGGCGAAAGGAAGAACTACCTTTGACCGGTTACCATCCAGTGCGCCATAACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTc > 2:665022/1‑150 (MQ=255) aGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACGGTCGTTCCAGCGcc > 1:621847/1‑150 (MQ=255) cGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCaa < 2:344501/150‑1 (MQ=255) aGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAagc < 1:470649/150‑1 (MQ=255) gTAACGGCTGACCGGTGACCATCCAATGGGCCATCACCTTCGCCAGCACAACTGCGGGCAAGGGTAACGGCAACAACCTCACTTGTTCATGACTGCCTTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAagca < 2:286449/150‑1 (MQ=255) tAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAACGGTAACGGCAACAACATCAACTGTTCAAGACTGCCGTCCTGCAAATCGTAACGGAACAGTCGTTCCAGCGCCAACAAGGACGAAagcag > 2:514809/1‑150 (MQ=255) gCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAg < 1:256912/130‑1 (MQ=255) gCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAg > 2:256912/1‑130 (MQ=255) cAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGTCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCACCAAGGATGAAAgcaacgcagc > 2:32147/1‑150 (MQ=255) aCCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGGCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGCTGGAAGCAGCGCAGCAAc > 2:358326/1‑150 (MQ=255) aGTGCGCCAACACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAACCCAGATAATGCCCg < 2:91188/150‑1 (MQ=255) gcgaCATCACCTGCGCCAGCAACACCGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCTTCACGGAACAGGCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAACCCAGATAATGCCCGGTg < 2:134790/150‑1 (MQ=255) | GCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACATCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAACCCAGATAATGCCCGGTG > NC_000913_3_hsa_tpiA/2296584‑2296876 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |