New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2700568	37 (0.940)	4 (0.120)	4/244	4.6	11.4%	noncoding (49/77 nt)	ohsC	sRNA antisense regulator of shoB toxin
	?	NC_000913_3_hsa_tpiA	= 2700581	30 (0.880)					noncoding (62/77 nt)	ohsC	sRNA antisense regulator of shoB toxin
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCC  >  NC_000913_3_hsa_tpiA/2700433‑2700722                                                                                                                                                     |                                                                                                                                              ttGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTc                                                                                                                                              >  2:190337/1‑150 (MQ=255)   gCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgg                                                                                                                                            <  1:39814/150‑1 (MQ=255)         tttgTAAAGTCTTGAGTTTTGATGTTATAGTTTGCTAGTTGTTTGTAAAAGATAAGTACACTGATCCATAATCGCTATTGTTGAGGGTGCATGCTGCACAAAAGTCACGTGAAAATGTAAAACCCCCGTTCCTTACCAGTTCGGGGGttt                                                                                                                                      <  2:423861/147‑1 (MQ=255)            gTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTAc                                                                                                                                   <  1:190337/150‑1 (MQ=255)                    tCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaaa                                                                                                                           <  1:396362/150‑1 (MQ=255)                                 cTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTAc                                                                                                                                   <  2:458276/129‑1 (MQ=255)                                 cTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTAc                                                                                                                                   >  1:458276/1‑129 (MQ=255)                                 cTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGtatta                                                                                                              >  2:243526/1‑150 (MQ=255)                                   aaaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTattatt                                                                                                            >  2:502042/1‑150 (MQ=255)                                    aaGATGGCAAGTGGCTTGTAAAAGATAAGTAAACTGATTCATAATGGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAACCCCCCGTTTCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttt                                                                                                           <  2:642897/150‑1 (MQ=255)                                     aGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTTTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAtttt                                                                                                          <  1:119248/150‑1 (MQ=255)                                        ttGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTaa                                                                                                       <  1:254481/150‑1 (MQ=255)                                           cAAGTTGCTTGAAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCAACACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGACCGGTATCATTTTTAACtt                                                                                                    >  2:669735/1‑150 (MQ=255)                                             aGTTGCTTGTAAAAGATAAGTACCCTGATCCATAAGCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTc                                                                                                  <  2:471628/150‑1 (MQ=255)                                                 gCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGta                                                                                                                 <  1:60678/131‑1 (MQ=255)                                                 gCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGta                                                                                                                 >  2:60678/1‑131 (MQ=255)                                                    tGTAAAAGATAAGTACACTGATCCAGAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAAtt                                                                                           <  2:103555/150‑1 (MQ=255)                                                         aaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGt                                                                                      <  1:484721/150‑1 (MQ=255)                                                                 tACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAATTAAAAAGTAAAACCCCCGTTCCTTCCCAGATCGGGGGGTTTACTTTTAAAAGAGAGAGGTATTCTTTTTAATGTTCAATAATTACCGAGGgacagg                                                                              >  1:282158/1‑148 (MQ=255)                                                                    acTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTGCCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAtttt                                                                                                          >  1:252152/1‑119 (MQ=255)                                                                    acTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTGCCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAtttt                                                                                                          <  2:252152/119‑1 (MQ=255)                                                                      tGACCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCCGTTCGGGGGTTTTACTTTTTAAAGAGAACCGTATTATTTTTACCTTTCAATAATTACCGTTGCCCAAGCacca                                                                         >  2:47831/1‑147 (MQ=255)                                                                                     gttgttGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGc                                                                                   >  1:295344/1‑125 (MQ=255)                                                                                     gttgttGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGc                                                                                   <  2:295344/125‑1 (MQ=255)                                                                                                   aTGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCat                                            >  2:142030/1‑150 (MQ=255)                                                                                                        tcacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTg                                       <  1:94089/149‑1 (MQ=255)                                                                                                         cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGc                                      >  1:280013/1‑150 (MQ=255)                                                                                                            aaaaTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAAc                                   >  1:37314/1‑150 (MQ=255)                                                                                                                ttAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCTGCTCATCTGCCAGCGTTACATGCATATTTGCTACGccc                               >  2:302724/1‑150 (MQ=255)                                                                                                                ttAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGccc                               >  2:603225/1‑150 (MQ=255)                                                                                                                      ttAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAAc                                                                                                      <  2:167965/73‑1 (MQ=255)                                                                                                                      ttAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAAc                                                                                                      >  1:167965/1‑73 (MQ=255)                                                                                                                      ttAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCttt                         >  1:117077/1‑150 (MQ=255)                                                                                                                        aaaaaGTAAAACCCCCGTTCCTCACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCCGCCTTTc                       >  2:424792/1‑150 (MQ=255)                                                                                                                                    ccccGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTaa           <  1:287492/150‑1 (MQ=255)                                                                                                                                             ttACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCGAAAGCATAGTGCCGCTCATCTGCCAGCGTTCCATGCATATTTGCAACTCCCAACTTTTCGTCCACTTTTAATGCCTCggc  >  2:608960/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                              TTGCTTTCTTCGTAAAGGCTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCC  >  NC_000913_3_hsa_tpiA/2700433‑2700722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.