New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 832289 =NA (NA)7 (0.120) 7/266 6.5 NA noncoding (1/98 nt) RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913_3_hsa_tpiA 832314 = NA (NA)noncoding (26/98 nt) RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

CTGCAGAAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAA  >  NC_000913_3_hsa_tpiA/832142‑832429
                                                                                                                                                   |                                                                                                                                            
cTGCAGAAAACCCGTCTCCCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGc                                                                                                                                             <  1:832058/149‑1 (MQ=255)
  gCAGTAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCt                                                                                                                                           <  2:257893/149‑1 (MQ=255)
  gCAGAAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGACAAACAACGTCGCCGCCGTCCACGTAAACCTGCCGCTGCGCCGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCt                                                                                                                                           >  2:528445/1‑149 (MQ=255)
     gAAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGAt                                                                                                                                        <  1:813007/149‑1 (MQ=255)
           ccGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTa                                                                                                                                  <  1:871568/149‑1 (MQ=255)
            cGTCTCGCCGCCTCGGCGATCCCAAACCGGCAGGCGAACAACAACCTCGCCGCCGTCCGCCCAAACCTGCCGCTGCGCCGTAATCTTTTATGCCGCGCTATCCCCGGCATCAGGCTGATCACCACACCCAAAACTGCCTGATGCGCtcc                                                                                                                                 >  2:904893/1‑147 (MQ=255)
              tctcGCCGCCTCGGCGATGCCAAACCGGCAGGCGGACAACAACGTCGCCTCCGTCCGCGTAAACCTGCCGCTACGCAGTAATCTTTTATGCCGGGCTATCCCCGGCATCAGGCTGATGGCCAAACGCAAAACTGACTGATGCGCTACGc                                                                                                                               >  2:249468/1‑149 (MQ=255)
                  gccgccTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATCCCCGGCATCAGGCTGCTGTACAAACGCAAAACTGCCTTATGCGCTACGCTTAt                                                                                                                           >  2:316342/1‑149 (MQ=255)
                    cgccTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCGGCTGCGCAGTAATCTTTTATGCCGGGCTATCCCCGGCATCAGGCTGATGGACAAACCCAAAACTAGCTGAATCGCCACGCTTATcg                                                                                                                         >  2:71209/1‑148 (MQ=255)
                       cgcGGCGATGCCAAACGGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTACGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                                                      <  2:158977/147‑1 (MQ=255)
                        tCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACCCAGAACTGCCTGATGCGCTACGCTTATCAGccc                                                                                                                     >  2:279588/1‑149 (MQ=255)
                           gCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                                                  >  2:389701/1‑149 (MQ=255)
                                  cAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAAct                                                                                                           >  2:150451/1‑149 (MQ=255)
                                        ggCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTAt                                                                                                                           <  2:927979/127‑1 (MQ=255)
                                        ggCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTAt                                                                                                                           >  1:927979/1‑127 (MQ=255)
                                         gCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAat                                                                                                    <  1:164957/149‑1 (MQ=255)
                                             gCGAACAACAGCGTCTGAGGCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAAAAAAAGAAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAatatat                                                                                                <  2:845890/149‑1 (MQ=38)
                                                aacaacaacGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGa                                                                                             >  1:377313/1‑149 (MQ=255)
                                                    acaacGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAAttt                                                                                         <  1:150451/149‑1 (MQ=255)
                                                                   tCCGCGTTAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAAttt                                                                                         <  1:489349/134‑1 (MQ=255)
                                                                   tCCGCGTTAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAAttt                                                                                         >  2:489349/1‑134 (MQ=255)
                                                                   tCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAgg                                                                          >  1:177239/1‑149 (MQ=255)
                                                                      gcgTAAACCTGCCGCTGCGCAGTAATCTTGTATGCCGGGCTCTGCCCGGCATCAGGCTGATGAACAAACGCAAAACCGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCg                                                                       <  1:861968/149‑1 (MQ=255)
                                                                           aaCCTGCCGCTGCGGAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATaa                                                                  <  1:823456/149‑1 (MQ=255)
                                                                           aaCCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATaa                                                                  <  1:378762/149‑1 (MQ=255)
                                                                             ccTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAgg                                                                >  1:184584/1‑149 (MQ=255)
                                                                              cTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTAt                                                                                                                           <  1:324257/89‑1 (MQ=255)
                                                                              cTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTAt                                                                                                                           >  2:324257/1‑89 (MQ=255)
                                                                              cTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                                                        >  2:147687/1‑92 (MQ=255)
                                                                              cTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                                                        <  1:147687/92‑1 (MQ=255)
                                                                              cTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGc                                                               <  1:315461/149‑1 (MQ=255)
                                                                                   gCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCACTGTATTGCATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTa                                                          >  1:55508/1‑149 (MQ=255)
                                                                                          aGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTCCGCCCCa                                                   >  2:50052/1‑149 (MQ=255)
                                                                                               tCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                              <  1:768272/149‑1 (MQ=255)
                                                                                                 ttttATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAATTGCCTGATGCGCCACGACCATCGGCCCCCCCCGAACTCTGCAATATCTTGAATTTGCATGCTTTTTTAGGCAGGATTAGGCGTTTAGGCCGCACCCGGCa                                            >  2:168977/1‑149 (MQ=21)
                                                                                                 cctgaTGCCGGGCATAGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTTGGCCGGATATGGCGTTTACGCCGCATCCGGCa                                            >  2:149659/5‑149 (MQ=21)
                                                                                                  ctgaTGCCGGGCATAGCCCGGCATCAGGCTGATGAACAAACCCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTACATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt                                           <  1:149659/146‑1 (MQ=21)
                                                                                                       gCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGCACTCTGCAATATATTGAATTTGCATGCTTTTGAAGGCCGGATAAGGCGTTTGCGCCGCACCTCGCATTTcac                                      >  2:314948/1‑149 (MQ=21)
                                                                                                        ccGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTccca                                     >  1:610944/1‑149 (MQ=255)
                                                                                                         cGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCacaa                                    <  1:11823/149‑1 (MQ=255)
                                                                                                         cGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCacaa                                    <  2:182189/149‑1 (MQ=255)
                                                                                                         cGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAAGTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCacaa                                    <  1:263994/149‑1 (MQ=255)
                                                                                                           ggCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGtt                                                            >  2:211784/1‑123 (MQ=255)
                                                                                                           ggCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGtt                                                            <  1:211784/123‑1 (MQ=255)
                                                                                                               aTGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTTTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCa                              <  1:382747/149‑1 (MQ=255)
                                                                                                                   ccGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATCTATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTg                          >  2:696724/1‑149 (MQ=255)
                                                                                                                   ccGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGACTTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCCCAACAAGCACTTg                          >  1:312513/1‑149 (MQ=255)
                                                                                                                   ccGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcc                                            <  2:228209/131‑2 (MQ=21)
                                                                                                                   ccGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcc                                            >  1:228209/1‑130 (MQ=18)
                                                                                                                   ccGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTg                          <  1:550819/149‑1 (MQ=255)
                                                                                                                      gCATCAGGCTGAGGAACAAGCGCAAAACTGCCGGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAAGATATTGAATTGGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCa                       <  1:734377/149‑1 (MQ=21)
                                                                                                                             gCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAAttt                <  1:861773/149‑1 (MQ=255)
                                                                                                                             gCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAAttt                <  1:837303/149‑1 (MQ=255)
                                                                                                                             gCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAAttt                >  2:600995/1‑149 (MQ=255)
                                                                                                                               tgatgaACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTga              <  1:546050/149‑1 (MQ=255)
                                                                                                                                 atgaACAAACGCAGAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTgaga            >  1:741087/1‑149 (MQ=255)
                                                                                                                                  tgaACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGaa           <  2:409121/149‑1 (MQ=255)
                                                                                                                                     aCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAacac        <  1:600995/149‑1 (MQ=255)
                                                                                                                                     aCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATGGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAacac        >  2:905281/1‑149 (MQ=255)
                                                                                                                                       aaaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACgg      <  2:257133/149‑1 (MQ=255)
                                                                                                                                       aaaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACgg      <  2:362804/149‑1 (MQ=255)
                                                                                                                                       aaaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACgg      >  1:1032529/1‑149 (MQ=255)
                                                                                                                                        aaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACCTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTCGGCCGGATAAGGCATTTACGCCGCATACCGCATTTCCCAACAAGCCCTTGTAAGCAATTTGAGAACCCggg     >  2:270394/1‑149 (MQ=18)
                                                                                                                                          cGCAAAACTGCCTGATGCGCTACGCTTATAAAGCCTACGTGAACTCGGCAATCTATTGAATTTGCATGCCTTTGTAGCCCGGATAAGGCGTTTACGCCGCATCCTGCATTTCACAACGAGCACTTTTCAGCAAATTGCGAACCCgggta   >  2:872359/1‑147 (MQ=18)
                                                                                                                                           gCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGGGAACACGGGcaa  >  1:739296/1‑149 (MQ=255)
                                                                                                                                           gCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGAAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTGTACGCCGCATTAACAATTTAATATTCAGCACTTGTCAGCAATTTGAGAACACGGGaaa  >  2:217309/1‑149 (MQ=18)
                                                                                                                                                   |                                                                                                                                            
CTGCAGAAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAA  >  NC_000913_3_hsa_tpiA/832142‑832429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.