New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 3022689	49 (1.030)	4 (0.090)	4/270	6.4	8.0%	coding (1374/2871 nt)	xdhD	putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding
	?	NC_000913_3_hsa_tpiA	= 3022708	45 (0.980)					coding (1393/2871 nt)	xdhD	putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGA  >  NC_000913_3_hsa_tpiA/3022542‑3022835                                                                                                                                                    |                                                                                                                                                   ccACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTCAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGGGCGCCt                                                                                                                                                   >  2:749541/1‑149 (MQ=255)  cACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCACGTGGGCATGAAGCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAAAAGTGTGCGACTg                                                                                                                                                  >  1:477186/1‑149 (MQ=255)        tCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAAc                                                                                                                                            >  2:293198/1‑149 (MQ=255)            tccACGTACCATGGCACGTACGCCGCCAGGTCGCGCGCTCCGTGGGTATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACACGACATACTGCTGCAAGAAGTGTGCGCCTGGGCCACCTGc                                                                                                                                        <  2:310449/148‑1 (MQ=255)             ccAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCg                                                                                                                                       >  2:727161/1‑149 (MQ=255)                     cATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCggg                                                                                                                               >  2:210708/1‑149 (MQ=255)                          cACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTcc                                                                                                                          <  2:682103/149‑1 (MQ=255)                           aCTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAATCAGGATATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCg                                                                                                                         <  1:793098/149‑1 (MQ=255)                                          tCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGGACTGTGCCGCTac                                                                                                          >  1:473850/1‑149 (MQ=255)                                               cgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCg                                                                                                     <  1:210708/149‑1 (MQ=255)                                                   tCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGGGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTgaa                                                                                                 <  1:360102/149‑1 (MQ=255)                                                      tGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTaca                                                                                                         >  2:355942/1‑138 (MQ=255)                                                      tGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTaca                                                                                                         <  1:355942/138‑1 (MQ=255)                                                        ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAagaaga                                                                                            <  1:727161/149‑1 (MQ=255)                                                         gCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAagag                                                                                           >  1:59036/1‑149 (MQ=255)                                                          cATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTtaagaaacgt                                                                                          >  2:619802/1‑145 (MQ=255)                                                           aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGtt                                                                                         <  1:366385/149‑1 (MQ=255)                                                           aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGtt                                                                                         >  2:695195/1‑149 (MQ=255)                                                               aaCAGCATAAAGGTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCATTACGTGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTAtt                                                                                     <  1:409410/149‑1 (MQ=255)                                                                      tAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAaca                                                                              >  1:222959/1‑149 (MQ=255)                                                                            tCATGTCATTAAAGAGCGAGTTGGCGGCGGTGTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCtctc                                                                        <  1:247093/149‑1 (MQ=255)                                                                               tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCACTCGTc                                                                     >  1:175459/1‑149 (MQ=255)                                                                               ggTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTc                                                                     <  1:15054/148‑1 (MQ=255)                                                                                gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGTTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCgg                                                                                                                        <  1:374513/97‑1 (MQ=255)                                                                                gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCgg                                                                                                                        >  2:374513/1‑97 (MQ=255)                                                                                   aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGt                                                                 >  1:136614/1‑149 (MQ=255)                                                                                     tAAAGAGCGAGTTGGCGGCGGTTTTTGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTcg                                                               <  1:293198/149‑1 (MQ=255)                                                                                        agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAaca                                                                              <  1:387493/131‑1 (MQ=255)                                                                                        agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAaca                                                                              >  2:387493/1‑131 (MQ=255)                                                                                          agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGaaa                                                          <  1:362845/149‑1 (MQ=255)                                                                                                ttGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCAcc                                                    >  2:775495/1‑149 (MQ=255)                                                                                                     ggcggTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGAc                                                                                                                                   >  1:295362/1‑65 (MQ=255)                                                                                                     ggcggTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGAc                                                                                                                                   <  2:295362/65‑1 (MQ=255)                                                                                                                 tCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCAGTCGTGTTCCGCCACACCCGTGAAGAAGAGTTTATTCCTAACACCCCTCGTCAACTCGCCAAAATCACAGCCAAACTCAGAGCGaa                                   >  2:741366/1‑149 (MQ=255)                                                                                                                    aaaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTa                                                                                                                      <  1:12602/63‑1 (MQ=255)                                                                                                                    aaaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTa                                                                                                                      >  2:12602/1‑63 (MQ=255)                                                                                                                     aaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGGGCGaaaaaa                               >  2:192145/1‑149 (MQ=255)                                                                                                                          gACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATgg                          >  2:318369/1‑149 (MQ=255)                                                                                                                             aTCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAACAAGATGGTCg                       >  2:650567/1‑149 (MQ=255)                                                                                                                             aTCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTAACGTCGCGAAAGTCACCGGCAAACTGGGAGCGAAAAAAGATGGTCg                       >  1:703464/1‑149 (MQ=255)                                                                                                                                ctgctgGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGGGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCt                    <  2:59036/149‑1 (MQ=255)                                                                                                                                   ctgGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGAc                 >  1:468168/1‑149 (MQ=255)                                                                                                                                      gaagaaGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCCCTCTCATGCGGGGTGCGAAAAAAGATGGTCGCCTGACGGc              >  1:232987/1‑149 (MQ=255)                                                                                                                                       aagaagTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCa             <  2:222959/149‑1 (MQ=255)                                                                                                                                       aagaagTGTGCGCCTGGGCAACCTGCGTGACCGGGCGGCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCa             <  1:252819/149‑1 (MQ=255)                                                                                                                                             tgtgCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAg       >  1:109116/1‑149 (MQ=255)                                                                                                                                                cggcCTGGGCAACTGGGGGGACGGGGCGTCCGGTACTGTTCCGCTACACCCTGGAAGAAGAGGTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTTACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATg    <  2:47779/147‑1 (MQ=255)                                                                                                                                                 cgcCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATgg   <  1:318369/149‑1 (MQ=255)                                                                                                                                                  gcCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGa  >  2:524802/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGA  >  NC_000913_3_hsa_tpiA/3022542‑3022835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.