New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 1096988 =64 (1.000)10 (0.160) 10/274 6.1 13.8% intergenic (+159/+577) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913_3_hsa_tpiA 1097191 = NA (NA)intergenic (+362/+374) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTC  >  NC_000913_3_hsa_tpiA/1096841‑1097136
                                                                                                                                                   |                                                                                                                                                    
gAAGTGACCAGATAATACATATATGTTCTGTACCCTCTTGCGCCTTTTGATTGTTTACTGAGTAACCACACATTTCATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGAGGGCACCCGGTGTGTGCAATATACGAAAAAAAAg                                                                                                                                                     >  1:443868/1‑149 (MQ=255)
  aGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGcc                                                                                                                                                   <  1:869896/149‑1 (MQ=255)
      aacAGATCATACATATATGTTCTGTACTCTCTCGCGCATTTTGCTGGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTa                                                                                                                                               <  1:68877/147‑1 (MQ=255)
      aCCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTa                                                                                                                                               >  1:92948/1‑149 (MQ=255)
        cAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGGGGGTGCAATATACGAAAAAAAAGCCCGTACt                                                                                                                                             >  1:921434/1‑149 (MQ=255)
             aataCATATATGTTGTGTACTCTCATGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGAGGGGGCACCCGGTGTGTGCAATATACGAAAAAAACACCCGTACTTTGGt                                                                                                                                        >  1:980114/1‑149 (MQ=255)
                aCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTa                                                                                                                                       <  1:781564/147‑1 (MQ=255)
                aCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTa                                                                                                                                       >  2:781564/1‑147 (MQ=255)
                    atatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGGGGGCGGGGGCACCCGGGGTGTGCAATATACAGAAAAAAAGCCCGTACTTTCGTACGGGct                                                                                                                                 >  1:537157/1‑149 (MQ=39)
                     gacgTTCTGTATTCATCTGCGCATTTTTAGGTTTAATTGAGTAATAAGACAGTCGATGTTAACGATTTCCCCTCGCCCTAACAGACGTGCGCGGCTTTGCCCCGTGTGTCCAATATCTGAACAAAAAGCCTCTACTTTCGTACGAGctc                                                                                                                                <  2:104556/146‑1 (MQ=255)
                       tGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaaa                                                                                                                                                      >  2:699829/1‑125 (MQ=255)
                       tGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATACACGaaaaaaaa                                                                                                                                                      <  1:699829/125‑1 (MQ=255)
                         ttCTGTACTCTTTGGCGAATTTCGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGAAATAAAAAAAAAAAAAGCCCGTACTTTCGTACGAGCtcttct                                                                                                                            <  2:921434/149‑1 (MQ=38)
                         ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcttct                                                                                                                            >  2:124268/1‑149 (MQ=255)
                         ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTAAGAGCtcttcg                                                                                                                            >  1:361049/1‑148 (MQ=255)
                          tCTGTACTCTCTGGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTTCACGATCTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcgtctc                                                                                                                           <  2:863515/149‑2 (MQ=255)
                              tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGccc                                                                                                                                                  <  2:925186/122‑1 (MQ=255)
                              tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGccc                                                                                                                                                  >  1:925186/1‑122 (MQ=255)
                                ctctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata                                                                                                                     >  1:758972/1‑149 (MQ=255)
                                 tctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAatat                                                                                                                    >  2:761006/1‑149 (MQ=255)
                                   tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATgg                                                                                                                  >  2:964920/1‑149 (MQ=255)
                                     ttGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCACCTCGCCCTAAGAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGCAGAAAAAGCCCGTACTTTCGTCCGAGCTCTGCTTTAAATTTGTCg                                                                                                                >  1:386896/1‑149 (MQ=37)
                                       gcgcATTGTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGt                                                                                                              <  1:121968/149‑1 (MQ=255)
                                           aTTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATGTCCCCACGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGGGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgg                                                                                                          <  1:797818/149‑1 (MQ=255)
                                              ttGATTGTTGAATGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAGAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg                                                                                                       <  1:746905/149‑1 (MQ=255)
                                                 aTTGTTGACTGAGTAACCAGACGGTTGATGTGCACGATTTCCCCGCGCCTTAACAAACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGa                                                                                                    <  2:543323/149‑1 (MQ=255)
                                                 aTTGCTGACTAAGCAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACCTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGa                                                                                                    <  2:703300/149‑1 (MQ=255)
                                                     ttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTCCGAGCTCTTCTGTAAATATGGCGGCGAAGGGGGGGTTGa                                                                                                >  1:199054/1‑149 (MQ=25)
                                                      tgACTGAGTAACCAGAAAGTTGATGTGCACGATTTCCCCGCGCCCTGGCACGCTTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAc                                                                                               <  1:829661/149‑1 (MQ=18)
                                                            aGTAACCAGAGAGTTGAGGTGGACGATTTCCCCTTGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGAGAAAAAAACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                                                                                         <  2:364040/149‑1 (MQ=21)
                                                             gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttc                                                                                        <  1:917456/149‑1 (MQ=255)
                                                                aCCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgct                                                                                     >  2:661874/1‑149 (MQ=255)
                                                                 ccAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCAATATGGCGGTGAGGGGGGGATTGACTCGCTtctctc                                                                                    >  1:757810/1‑149 (MQ=255)
                                                                  cggACAGTTGATGTGCAGGATTTCCCGTCGCCATAACAGACGGGGGCGGGGGCACCCGTGGTGTGCAATATACGAAAAAAAATCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGGGGTGAGGGGGGGATTGACTCGCTtcgctcg                                                                                   <  2:43987/147‑1 (MQ=18)
                                                                  cAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTATTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg                                                                                   >  2:209908/1‑149 (MQ=255)
                                                                         ttGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                                            <  1:124268/149‑1 (MQ=255)
                                                                          tGATGTGCACGATTTCCCCTCGTCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCgg                                                                           <  1:890265/149‑1 (MQ=255)
                                                                          tGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCgg                                                                           <  2:35538/149‑1 (MQ=255)
                                                                             tgtgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCa                                                                        >  2:1125984/1‑149 (MQ=255)
                                                                               tgCACGATCGCCCCTCGCCCTAACAGACGTGGGCGCTGGCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATTTCATTCTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGc                                                                      <  2:757810/149‑1 (MQ=17)
                                                                                gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt                                                                                                   <  1:572745/119‑1 (MQ=255)
                                                                                gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt                                                                                                   >  2:572745/1‑119 (MQ=255)
                                                                                    gATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCt                                                                 >  1:28015/1‑149 (MQ=255)
                                                                                            cTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                                                         <  1:738537/149‑1 (MQ=255)
                                                                                            cTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                                                         >  1:840297/1‑149 (MQ=255)
                                                                                             tCGCCCTAACAGACATGTCAGGGGGCACCCAGGGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGtt                                                        >  2:955394/1‑149 (MQ=14)
                                                                                                 ccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCCCTGCGTTCACg                                                    >  1:176025/1‑149 (MQ=255)
                                                                                                     aCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt                                                <  1:39820/149‑1 (MQ=255)
                                                                                                       aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt                                              >  2:713919/1‑149 (MQ=255)
                                                                                                            tGGGCGGGGGCACCCGGTGTGAGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAc                                         <  1:71448/149‑1 (MQ=255)
                                                                                                                cGGGAGCACCCGGTGGGTGGAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc                                     <  2:716128/149‑1 (MQ=16)
                                                                                                                    ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCACCCCGCTCCCAGCGTCCCCGGTCTGTCCAACTGGCTTTc                                 >  2:1083803/1‑149 (MQ=11)
                                                                                                                    ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTGAAATATGGCGGTGAGGGGGGGATGGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTTACTGCGTTCACGGTCTGTCCAACTGGCTGTc                                 <  1:170468/149‑1 (MQ=12)
                                                                                                                                  gCAATCTACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCGAGTTGTCGAcc                   <  1:715825/149‑1 (MQ=14)
                                                                                                                                     atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGCCTGTCCAACTGGCTGTCGCCAATTGTCGaccacc                >  2:733374/1‑149 (MQ=9)
                                                                                                                                      tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCg               >  1:165383/1‑149 (MQ=32)
                                                                                                                                      tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCg               >  1:740264/1‑149 (MQ=32)
                                                                                                                                          cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCg           <  2:28015/149‑1 (MQ=32)
                                                                                                                                          cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTATAAAGAGGTCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCg           <  1:209908/149‑1 (MQ=255)
                                                                                                                                            aaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGATTGCCTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCggg         <  2:386896/149‑1 (MQ=17)
                                                                                                                                             aaaaaaaGCCCGTACTGTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgggg        <  2:375171/149‑1 (MQ=17)
                                                                                                                                              aaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGc       <  1:761006/149‑1 (MQ=32)
                                                                                                                                                aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCtt     <  2:361049/149‑1 (MQ=32)
                                                                                                                                                  aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtct   <  1:1125984/149‑1 (MQ=32)
                                                                                                                                                   aGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtctc  <  2:740264/149‑1 (MQ=32)
                                                                                                                                                   aGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtctc  <  2:165383/149‑1 (MQ=32)
                                                                                                                                                   |                                                                                                                                                    
GAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTC  >  NC_000913_3_hsa_tpiA/1096841‑1097136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.