New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 1207790 =6 (0.160)24 (0.740) 21/242 NT 77.0% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_tpiA 1209619 = 9 (0.280)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

CAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGG  >  NC_000913_3_hsa_tpiA/1207644‑1207938
                                                                                                                                                  |                                                                                                                                                    
tagggtggtggaggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                    <  2:626774‑M1/145‑1 (MQ=255)
catcctgcacatttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTg                                                                                                                                                    >  1:645437‑M1/147‑149 (MQ=255)
catcctgcacagttcagcgcattacgttgtagatctgtgttctggtcattttttggtacgcgtacatcgccaatgagtaggttaaatccccctggtaaaagcagtcatgatgccctttgctttttatttcttcgttttcataatcgttt                                                                                                                                                    <  2:175640‑M1/3‑2 (MQ=255)
catcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTg                                                                                                                                                    <  2:486186‑M1/3‑1 (MQ=255)
catcctgcacagttcagcgcattacgttgtagatctgggtgctggtcatttcttgataaaagtacatagccaataagcattttaaatccccctgataaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTg                                                                                                                                                    <  2:174940‑M1/3‑1 (MQ=255)
     tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccgtggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                                                                               <  2:617163‑M1/8‑1 (MQ=255)
      gcacacttcagcgcattacgttgtagatctgtgttctggccatttgtggatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttgttcattttcataaacgTTGGTTTgg                                                                                                                                              >  1:529031‑M1/141‑149 (MQ=255)
              cagcgcgttcatttgtagatctttgttctggtctttttttgattcgcgtacagagccaataagcatgttaaatcccccttctaaaagcaggaatgatgccttttgcttgttatttcttcattttcataaacgTTGGTTTTGGAGAAGGa                                                                                                                                      >  2:302702‑M1/133‑149 (MQ=255)
                    gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                <  1:651674/149‑1 (MQ=255)
                    gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                <  1:396753/149‑1 (MQ=255)
                         aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTGTGGGAGAAGGctctgcattacc                                                                                                                           >  2:579869‑M1/1‑137 (MQ=255)
                             tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                       <  1:624979/149‑1 (MQ=255)
                              ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGCTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcatcacctgtta                                                                                                                      >  2:573634‑M1/1‑132 (MQ=255)
                               gagaAGGGGCGGCACGACCAGGTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                     <  1:385175‑M1/149‑19 (MQ=255)
                                agcagggGCGGCACGACCAGTTACTCACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                                                                    <  1:69366‑M1/146‑20 (MQ=255)
                                     gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                               <  1:673904‑M1/149‑25 (MQ=255)
                                           cacaACCAGTTACTTACCGCACTTCGCTCGCTGCTGTTAAACCGCAAGAATCCGTTTGGCGCTATCAAATAGGATGGCACTGTCCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctcagcattacctgttggtgtcccggttcc                                                                                                         >  2:396691‑M1/1‑119 (MQ=255)
                                           aaccaccagTTACTTACCTGACTTCGCGCGGTGTTGATAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcc                                                                                                         <  2:503446‑M1/145‑31 (MQ=255)
                                            aCGTCCAGGTACTTAACGACCCTCGCGCGTTGCTGTTAAGCCGCAAGAATCCGTTGGGTGATATAAAATTGGATGGCACTGCGCTAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgtattacctgttggtgtcccggttccg                                                                                                        <  2:195514‑M1/149‑32 (MQ=255)
                                               atttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACCGCTACATtagac                                                                                                     <  2:368360‑M1/50‑3 (MQ=255)
                                                       cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAACCCTGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                             <  1:161500‑M1/149‑43 (MQ=255)
                                                       cttacCGCACTTCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGACTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtatgtgtcccagttccgtgcgcttcagc                                                                                             >  2:588239‑M1/1‑107 (MQ=255)
                                                           gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                         <  1:450165‑M1/62‑1 (MQ=255)
                                                                   agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAACAACGCGTACATGAGGACGCACCGGTTTCATAGCtat                                                                                 <  1:364062‑M1/70‑1 (MQ=255)
                                                                    gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca                                                                                <  1:361711‑M1/149‑56 (MQ=255)
                                                                     cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccag                                                                               >  2:418357‑M1/1‑93 (MQ=255)
                                                                      caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                              <  1:162714‑M1/73‑1 (MQ=255)
                                                                        gctgctGTTAAGCCGCAGGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGAAAACGACTCTCGAAAACCTTGGTTTGGGAGAAGGctctccattacctgttggtgtcccggttcggtcgccttccaccaccccgcataccggct                                                                            >  2:447373‑M1/1‑90 (MQ=255)
                                                                        gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                            <  1:578499/149‑1 (MQ=255)
                                                                         tgagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATTCAAGAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                           >  1:447160‑M1/74‑149 (MQ=255)
                                                                             catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattaacataaccgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCGGTTTCATAGCtataccgcatata                                                                       <  2:598986‑M1/80‑7 (MQ=255)
                                                                              gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                                                                      >  1:637666‑M1/1‑84 (MQ=255)
                                                                              gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtagccttcagccactcagccaaaaggctggctga                                                                      >  2:660776‑M1/1‑84 (MQ=255)
                                                                               ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAAGGctctgcattaccagtgggtgtcccggttccgtgcccctcagccactccgccaacaggctggctgaa                                                                     >  2:363380‑M1/1‑83 (MQ=255)
                                                                                 ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGGTACATTAGGACGCACCGGTTTCATAGCTATACAGGTGATGATtg                                                                   <  1:689591‑M1/84‑1 (MQ=255)
                                                                                   aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                 >  1:347166‑M1/64‑149 (MQ=255)
                                                                                     cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattccctgttggtgtcccggttcagtggccttccgcacctccgccaacacgctggctgaactgcaa                                                               >  2:96668‑M1/1‑77 (MQ=255)
                                                                                     aaacccgttgtaaaaggaggacaggtgtcatttgcttgttatttctacattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                                                               <  2:501241‑M1/88‑1 (MQ=255)
                                                                                       cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatg                                                             >  2:81985‑M1/1‑75 (MQ=255)
                                                                                         ccctggtaaacgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                           <  1:347215‑M1/92‑1 (MQ=255)
                                                                                         ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGATGTACCGGTTTCATGGCTATCCCGGTTATGATTGGTGGTAtt                                                           <  2:458396‑M1/92‑1 (MQ=255)
                                                                                         ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                           >  1:352979‑M1/58‑149 (MQ=255)
                                                                                          gAATCCGTGTGGCGATCTCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg                                                          <  2:580643‑M1/149‑78 (MQ=255)
                                                                                            tgccGTTTGGCGATATCAAATCGGATGGCACTGTGCGAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGAACCGGTTTCTTAGCTATATCGGTTATGATTGGTGGTATTGAg                                                        <  1:550371/147‑1 (MQ=255)
                                                                                            aTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAAGCTGGGTTTGGGTGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtccc                                                        >  2:669428‑M1/1‑70 (MQ=255)
                                                                                                aaaagcaggaatgatgccatttgcttgttatttcttcattttcatagacgTTGTTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                    >  1:478906‑M1/51‑149 (MQ=255)
                                                                                                 tttGGCGATATCAACTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                                   <  1:34088‑M1/149‑85 (MQ=255)
                                                                                                           tgtttggatttgcttgttatttattcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGTACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                         >  2:452415‑M1/40‑149 (MQ=255)
                                                                                                                 cGGATGGCACTGTGCAAACGGCCCTCGAAACCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGCTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                   <  1:177226/149‑1 (MQ=255)
                                                                                                                   tttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                 >  2:27804‑M1/32‑149 (MQ=255)
                                                                                                                      ggCAGTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgga                              <  1:438426‑M1/149‑106 (MQ=255)
                                                                                                                      gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                              >  1:644308‑M1/29‑149 (MQ=255)
                                                                                                                        ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                            <  2:3388‑M1/123‑1 (MQ=255)
                                                                                                                         tgttatttctttattttcataaacgTGGGTTTCGGAGAAGGACAAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                           >  1:175640‑M1/26‑149 (MQ=255)
                                                                                                                         tgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                           >  1:174940‑M1/26‑149 (MQ=255)
                                                                                                                         aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaaaggctgggtgaaatgcaatggtggcgctttttctgctgaagactacccagaact                           >  2:69777‑M1/1‑41 (MQ=255)
                                                                                                                                tcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                    <  1:301085‑M1/131‑1 (MQ=255)
                                                                                                                                  ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATAGGTGGTATTGAGCAATCAGTAATTATTCAGTGGGGGTGGAATGCCGCaaa                  >  1:570979‑M1/17‑149 (MQ=255)
                                                                                                                                  aCGGCTCTCGAAAGCTGTGGTTTGGGAGAAGGctctgcattacctgttggcgtcccggttcggtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatccccggaactggcgaaggc                  <  2:161530‑M1/149‑118 (MQ=255)
                                                                                                                                  aCGGCTCTCGAAACCCTGGGTTGGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                  <  1:76234‑M1/149‑118 (MQ=255)
                                                                                                                                  aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                  <  1:424522‑M1/149‑118 (MQ=255)
                                                                                                                                   cGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggct                 >  2:332878‑M1/1‑31 (MQ=255)
                                                                                                                                     attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc               <  1:348437‑M1/136‑1 (MQ=255)
                                                                                                                                      ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa              <  1:301166‑M1/137‑1 (MQ=255)
                                                                                                                                       tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc             >  2:217938‑M1/1‑27 (MQ=255)
                                                                                                                                          cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga          <  1:368971‑M1/149‑126 (MQ=255)
                                                                                                                                          cGAAAACCTGGGGCTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga          <  2:656308‑M1/149‑126 (MQ=255)
                                                                                                                                           ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc         <  1:691696‑M1/142‑1 (MQ=255)
                                                                                                                                              aaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaa      <  1:81985‑M1/149‑130 (MQ=255)
                                                                                                                                                 gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg   <  2:141040‑M1/148‑1 (MQ=255)
                                                                                                                                                 cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACCGCTACATTTGGACGCACAGGTTTCATAGCTATACCAGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTTGAGTGCCGCAAAACCACATCCCTCTg  >  2:529529/1‑148 (MQ=255)
                                                                                                                                                  TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg  >  2:369323‑M1/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGG  >  NC_000913_3_hsa_tpiA/1207644‑1207938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.