| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_hsa_tpiA | 1,726,165 | A→G | Y48C (TAC→TGC) | nemR → | transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_hsa_tpiA | 1,726,165 | 0 | A | G | 100.0% | 55.2 / NA | 18 | Y48C (TAC→TGC) | nemR | transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/9); total (9/9) | |||||||||||
CCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACT > NC_000913_3_hsa_tpiA/1726036‑1726303 | ccGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCACCGGGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCg > 1:329371/1‑149 (MQ=255) cGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGCGAACCTCTGCGTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAACGAAGCGt > 1:374743/1‑149 (MQ=255) caaCACGAAACGCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACTGGGATGGGGCTAAGCCAATTACTAAAAACCGCTGAAGTGCCGAAACGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGtt < 2:170469/148‑1 (MQ=255) aCATGATACTCGCGAACATCTCCTGGCCACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTg < 1:13252/149‑1 (MQ=255) cgAACATCTGCTGGCGAGGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTCCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGc < 2:222791/149‑1 (MQ=255) gggCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTAcgccg > 2:376262/1‑149 (MQ=255) aCTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCCTATCAcc > 1:34818/1‑149 (MQ=255) cTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAGACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGGTTGGCGTTGCCATGCTTGAGCGTCATTAGGCCGCTTATCACCa > 1:35833/1‑149 (MQ=255) cAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCgactgac > 1:366333/1‑149 (MQ=255) gTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGctct < 1:202416/83‑1 (MQ=255) gTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGctct > 2:202416/1‑83 (MQ=255) ttCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTtgct < 2:366333/149‑1 (MQ=255) cgtAAGCAAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATACCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAg < 1:180964/147‑1 (MQ=255) cTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGa < 1:102240/149‑1 (MQ=255) gcGCAGAAGTGCCGAAAGGTTCCTTCGACCACTGCTTCCGCTCTAAAGAAGCGTTTGGCCTTGCCATGCTTGAGCTTCATTACGCTGCATATCACCATCGACTGACTGAGTTGCTGCATTCCGGCGAAGGTAACTACCGCGACCGCATa < 2:192292/148‑1 (MQ=255) tGAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGGGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTgg > 2:79326/1‑149 (MQ=255) gAAGTGCCGAAAGGGTCCTTCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATCACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGc < 2:159668/149‑1 (MQ=255) ttCTATCACTGCTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACt > 2:1108/1‑149 (MQ=255) | CCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACT > NC_000913_3_hsa_tpiA/1726036‑1726303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |