New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	129734 =	46 (1.320)	3 (0.090)	3/264	NT	6.3%	coding (1527/1854 nt)	yacH	DUF3300 family protein
	?	NC_000913_3_hsa_tpiA	129754 =	45 (1.350)					coding (1507/1854 nt)	yacH	DUF3300 family protein

CGTTATCACGTTGCTGTTGATTCAGTGGGCGCTGCTGTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGACGAGCGGCGTCC  >  NC_000913_3_hsa_tpiA/129586‑129881                                                                                                                                                     |                                                                                                                                                    ccactgacccagcaacaaaaggacgccgctcgtcagcgttatctgtccgcctcgcctaatcagcgccaggcagttcgcgagagaatgcagactaacccgaagatccagcagcgaagagaggcagcgcgtgcgcgcattcagtccgcctc                                                                                                                                                     >  2:390811‑M1/149‑149 (MQ=255) ccactgacccagcaacaaaaggacgccgctcgtcagcgttatcagtccgcctcgcctgagcagcgccaggcagttcgcgagagaatgcagactaacccgaagatccagcagcgaagagaggcagcgcgtgagcgcattcagtccgcctc                                                                                                                                                     <  1:621911‑M1/1‑1 (MQ=255)    ctgacccagcaacaaaaggacgccgctcgtcagcgttatcagtccgcctcgcctgagcagcgccaggcagttcgcgagagaatgcagactaacccgaagatccagcagcgaagagaggcagcgcgtgagcgcattcagtccgcctcgcc                                                                                                                                                  <  1:334518‑M1/4‑1 (MQ=255)        aCGTTGGGGTGGATTCAGTGGGCGCTGCTGTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCATGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTTCATTTTCTCGCGAACCGCCTGgc                                                                                                                                              <  2:356910/149‑1 (MQ=255)               gtttGATTAAGTGGGGGCTGCGGTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGCTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTc                                                                                                                                       <  1:95646/147‑1 (MQ=255)                gTTGATTGAGTGGGCGCTGCTGTACTTTTTCCCGGAGCACCCGGCGCTGCTCTGGTTATGTGGATTGTATTCGCTTACGTGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCa                                                                                                                                      <  2:72395/149‑1 (MQ=255)                 ttGATTCAGTGGGCGCTGCTGTACTTTTTCCTTAAACACCTGGCGCTGATCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCgctgcccgg                                                                                                                                     >  2:126074/1‑145 (MQ=255)                 ttGATTCAGTGGGCGCTGCTGTACTTTTCCCCGAAGCACAGGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTCGTCGGCATTTTGTCGCGAACCGCCTGGCGCTGCTCag                                                                                                                                     >  2:304964/1‑149 (MQ=255)                   ggttCAGTGGGCGCTGCTGTACTTTTTCCTTAAACGCCTGGCTCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCaggc                                                                                                                                   <  2:373015/147‑1 (MQ=255)                     ggaccccgctcgtcagcgttatcaggccgcctcgccttagcagcgccaggcagttcgcgagagaatgcagactaacccgaagatccagcagcgaagagaggcagcgcgtgagcgcattcagtccgcctCGCCTGGCGCTGCTCaggcga                                                                                                                                 >  1:443686‑M1/129‑149 (MQ=255)                             gcgcTGCTGTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACt                                                                                                                         <  1:406176/149‑1 (MQ=255)                                 tgctgTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTCGCGCTCCTCAGCCGCCGCGGAccccat                                                                                                                     >  2:113641/1‑144 (MQ=255)                                 tgctgTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTAGCGCTGCCCAGGCGCGGCGGCCTGAAt                                                                                                                     >  2:420923/1‑149 (MQ=255)                                                ttAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGc                                                                                                      <  1:267103/149‑1 (MQ=255)                                                  aaaaACCTGGCGCTGCCCCGGTGGAGCGGACTGAATACGCCCACGCGCTTCGTCTCCTCGCTTCTTGGTCTGCGGGTTTGTTTGCAATTTTCCGCGGACCGCCTGGCGCTGCCCCAGCGAGGCGGACTGAATGCGCCCCCCCGATGCct                                                                                                    >  2:56686/1‑149 (MQ=255)                                                    acacCTGGCCCTGCTCTGGTGATGCGGACTGACTCAGCTCACGCGCTGCGCCCCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTCTCTCCCCACCCGCCTGGCGCTCCTCAGGCCCGCCGGACTGAATGCGCTCCCGCGCCGCctcg                                                                                                  >  2:304690/1‑148 (MQ=18)                                                         tGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCg                                                                                             <  2:118682/149‑1 (MQ=255)                                                                        gATGCGGACTGAATACGCTCATGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCgg                                                                              <  2:599463/149‑1 (MQ=255)                                                                            cGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTa                                                                          <  2:290542/149‑1 (MQ=255)                                                                              gACTGAATACGCTCACGTGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGt                                                                        <  1:250394/149‑1 (MQ=255)                                                                                cTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCt                                                                      <  1:388807/149‑1 (MQ=255)                                                                                 tGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTg                                                                     >  2:531042/1‑149 (MQ=255)                                                                                              gcgcTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTGTCGCGAACCGCCTAGCGCTGCTCAGGCGAGGCGGACTGAATGCGATGACGCGCTCACTTTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGTGa                                                        >  2:351119/1‑149 (MQ=25)                                                                                              gcgcTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCAAACCGCCTGCCGCTACTCAGAAGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGATAGTCTGCATTCTCTGGCGa                                                        >  1:364615/1‑149 (MQ=255)                                                                                               cgcTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTGGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCTCTGCTGGATCTTCGGGTTAGTCTGCATTCTCCCGCGaa                                                       <  2:25835/149‑1 (MQ=255)                                                                                                   gaagatccagcagcgaagagaggcagcgcgtgagcgcattcagtccgcctCGCCTGGCGCTGCTCaggcgagg                                                                                                                               >  1:276947‑M1/51‑73 (MQ=255)                                                                                                   gaagatccagcagcgaagagaggcagcgcgtgagcgcattcagtccgcctCGCCTGGCGCTGCTCaggcgagg                                                                                                                               <  2:276947‑M1/23‑1 (MQ=255)                                                                                                        tctTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGgc                                              >  1:439544/1‑149 (MQ=255)                                                                                                        tctTCGCTGCTGGTTCTGCGGGGTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATACGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTGCGGGTGAGTCTGCATTCGCTCGCGGACTGCCTGgc                                              >  2:56893/1‑149 (MQ=25)                                                                                                          ttCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTTGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTTgcgc                                            >  2:140328/1‑149 (MQ=255)                                                                                                          ttCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGgcgc                                            >  1:471710/1‑149 (MQ=255)                                                                                                          ttCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGacgc                                            >  1:470047/1‑149 (MQ=255)                                                                                                             gctgctTGTCTTGTGGGTTACTCTGCATTTTCGCGCGAACCGCCTGGCGCTGCTCAGGTGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCgctgc                                         <  2:248278/149‑1 (MQ=255)                                                                                                               tgctgcTTCTACGGGTTGCTCTGCATTTTCTCGCGAACCCCCTGGCGCTGCGCAGGCGAGGCGGACTGAATGCGCTCACGCGCCGCCTCCCTTCGCCGCTGGATCGTCGCGCTAGTCTGCCCTCTCTCGCTAACCGCCCGgcccagccc                                       >  2:143813/1‑142 (MQ=255)                                                                                                                 ctgGTTCGGCGGGTTCGTCTGCATTTTCTCTCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCag                                     <  2:449048/149‑1 (MQ=255)                                                                                                                      tCTGCGGGTTAGTCTGCATGTTCTCGCGAAGCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCaggcgag                                <  1:338256/149‑1 (MQ=255)                                                                                                                      ggtgtgggTGAGTCTGCGTTTTCTCGCGAACCCCCTGGCGCTGCTCCGGTGAGGCGGACTGAATGAGCTAACGCGATGCCTCTCTTCGCTGCTGGATCGTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCaggcgag                                <  2:258258/144‑1 (MQ=18)                                                                                                                        tGCGGGTTGGTCTGAATTTTCTCGCGAAACGCTTGGCGCTGCTCAGGCGATGCGGACTGAATGCGCTCACGCGCTGCCTCTCGTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCaggcgaggc                              <  2:41845/149‑1 (MQ=18)                                                                                                                             gTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGATGCTGGATCGTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCCCAGGCGAGGCGGACt                         >  2:72987/1‑149 (MQ=255)                                                                                                                               tAGTCTGGATTTTCTTGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATTCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGACAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGa                       <  2:167969/149‑1 (MQ=18)                                                                                                                                  tCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGGGGCGGACTGATaa                    >  1:108193/1‑149 (MQ=255)                                                                                                                                   cTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCCGGCGAGGCGGCCTGATaaa                   >  2:89700/1‑148 (MQ=255)                                                                                                                                    tGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTGTTCGCTGCTGGCTCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGACGAGGCGGCTTGAtcagc                  >  2:42481/1‑145 (MQ=38)                                                                                                                                    tGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCTAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGGGAACg                  >  1:284557/1‑149 (MQ=255)                                                                                                                                    tGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACg                  <  1:302479/149‑1 (MQ=255)                                                                                                                                     gcaggttCTCCCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGc                 <  1:182801/144‑1 (MQ=255)                                                                                                                                      cATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACggt                >  1:525605/1‑147 (MQ=255)                                                                                                                                        ttttCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGa              >  1:76346/1‑149 (MQ=255)                                                                                                                                         tttCTCGCGAACCGGCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGAc             <  1:222599/149‑1 (MQ=255)                                                                                                                                         tttCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGAc             <  1:56686/149‑1 (MQ=255)                                                                                                                                             ttgcgGACCGCCTGGGTCTGCTCAGGCGAGGCGTACTGAATGGGCTCACGTGCGGCTTGTCTTGTGTGCGGGATTTTCGGGTTAGTCTGCAGTCTCTCGCGAACTGCCTGGCGCTGTTCAGGCGAGTCGGACTGATAACGCTGACGAgc         <  2:30325/147‑1 (MQ=255)                                                                                                                                             tcctgAACCGCCTGGCGGTTCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTTGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCTGACTTATAACGCTGACGAgc         <  2:612303/145‑1 (MQ=21)                                                                                                                                             tcGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGCCTGATAACGCTGACGAgc         >  1:2890/1‑149 (MQ=255)                                                                                                                                                 gAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGACGAgcggcg     <  1:493239/149‑1 (MQ=255)                                                                                                                                                    ccGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGGCTGATAACGCTGACGAGCGGCGTcc  >  1:235685/1‑149 (MQ=255)                                                                                                                                                    ccGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGACGAGCGGCGTcc  >  1:575904/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGTTATCACGTTGCTGTTGATTCAGTGGGCGCTGCTGTACTTTTTCCTTAAACACCTGGCGCTGCTCTGGTGATGCGGACTGAATACGCTCACGCGCTGCGTCTCTTCGCTGCTGGTTCTGCGGGTTAGTCTGCATTTTCTCGCGAACCGCCTGGCGCTGCTCAGGCGAGGCGGACTGAATGCGCTCACGCGCTGCCTCTCTTCGCTGCTGGATCTTCGGGTTAGTCTGCATTCTCTCGCGAACTGCCTGGCGCTGCTCAGGCGAGGCGGACTGATAACGCTGACGAGCGGCGTCC  >  NC_000913_3_hsa_tpiA/129586‑129881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.