New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 5929695 (1.020)13 (0.160) 12/228 8.5 13.6% intergenic (+17/+391) yabP/rluA pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent
?NC_000913_3_hsa_tpiA = 59302 83 (1.020)intergenic (+23/+385) yabP/rluA pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATT  >  NC_000913_3_hsa_tpiA/59148‑59444
                                                                                                                                                    |                                                                                                                                                      
gaGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑t                                                                                                                                                      >  1:480353/1‑150 (MQ=255)
gaGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑t                                                                                                                                                      >  3:820169/1‑150 (MQ=255)
 aGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGcgt                                                                                                                                                      >  3:794387/1‑148 (MQ=255)
 aGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑Tg                                                                                                                                                     <  4:323753/150‑1 (MQ=255)
  ggTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑Tgg                                                                                                                                                    >  3:17978/1‑150 (MQ=255)
   gTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGa                                                                                                                                                   >  2:899886/1‑150 (MQ=255)
    tAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGaa                                                                                                                                                  <  2:785578/150‑1 (MQ=255)
     aaTTATTATTAATAAAATCCCCACCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAc                                                                                                                                                 <  2:94860/150‑1 (MQ=255)
       ttattattaATAAAATCTCGCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑Gc                                                                                                                                              <  1:355635/150‑1 (MQ=255)
            attaATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCtt                                                                                                                                         <  4:537571/150‑1 (MQ=255)
            attaATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAAGTACGGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCtt                                                                                                                                         >  3:834622/1‑150 (MQ=255)
              taataaAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCa                                                                                                                                       >  1:1084655/1‑150 (MQ=255)
               aataaAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCaa                                                                                                                                      <  3:110102/150‑1 (MQ=255)
                ataaAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAAc                                                                                                                                     <  3:313170/150‑1 (MQ=255)
                    aaTCCCCGCCAAAAAGATGTATACTAAAGGAGTGGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTGTTGAATTATCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAGCCTTa                                                                                                                                 <  2:1015598/150‑1 (MQ=255)
                     aTCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAg                                                                                                                                <  2:1084655/150‑1 (MQ=255)
                      tCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGc                                                                                                                               >  2:1355304/1‑150 (MQ=255)
                         cccccAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑‑GTTCCAGCCCCTTCAACCTTAGctta                                                                                                                            <  3:364763/150‑4 (MQ=38)
                           cccAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATAAGCCAGAATAAGCTAAGGTTGAAGGGGCGTTCCA‑‑GCCCCTTCAACCTTAGcttatt                                                                                                                          >  1:105616/1‑145 (MQ=37)
                            ccAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGc                                                                                                                         >  2:1347326/1‑150 (MQ=255)
                             cAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCg                                                                                                                        >  1:477164/1‑150 (MQ=255)
                              aaaaaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGc                                                                                                                                                        <  2:967837/119‑1 (MQ=255)
                              aaaaaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGc                                                                                                                                                        >  1:967837/1‑119 (MQ=255)
                              aaaaaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGaa                                                                                                                                                  <  2:738164/124‑1 (MQ=255)
                              aaaaaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGaa                                                                                                                                                  >  1:738164/1‑124 (MQ=255)
                              aaaaaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGt                                                                                                                       >  4:209248/1‑150 (MQ=255)
                                 aaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTggg                                                                                                                    >  2:262141/1‑150 (MQ=255)
                                        aTACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGAttt                                                                                                             <  2:248284/150‑1 (MQ=255)
                                          aCTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTca                                                                                                           <  2:472557/150‑1 (MQ=255)
                                          aCTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTca                                                                                                           <  3:209248/150‑1 (MQ=255)
                                          aCTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGATGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTca                                                                                                           >  4:781595/1‑150 (MQ=255)
                                            tAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTcaca                                                                                                         >  4:258534/1‑150 (MQ=255)
                                             aaaGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGAGTTCACaa                                                                                                        >  4:385528/1‑150 (MQ=255)
                                              aaGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAAt                                                                                                       <  2:757944/150‑1 (MQ=255)
                                                    ttGCTACTGACGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATAGAATAAGCCAGAATAAGCTAAGGTTGAAGGGAC‑TGGAAC‑GACCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCAGAATTAGaaa                                                                                                 >  2:101158/1‑150 (MQ=255)
                                                    ttGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGaaa                                                                                                 <  3:440301/150‑1 (MQ=255)
                                                    ttGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGaaa                                                                                                 <  2:480353/150‑1 (MQ=255)
                                                        tACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACaa                                                                                                        <  3:117934/139‑1 (MQ=255)
                                                        tACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACaa                                                                                                        >  4:117934/1‑139 (MQ=255)
                                                        tACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGAcc                                                                                             >  3:5394/1‑150 (MQ=255)
                                                        tACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGAcc                                                                                             >  1:1001906/1‑150 (MQ=255)
                                                        tACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGAcc                                                                                             >  2:721378/1‑150 (MQ=255)
                                                             aagaagTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAg                                                                                                                                >  3:751624/1‑110 (MQ=255)
                                                             aagaagTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAg                                                                                                                                <  4:751624/110‑1 (MQ=255)
                                                             aagaagTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCat                                                                                        >  1:1013019/1‑150 (MQ=255)
                                                                    tGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                 <  1:759709/150‑1 (MQ=255)
                                                                    tGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                 <  1:899886/150‑1 (MQ=255)
                                                                      ctactaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTa                                                                               <  4:637970/150‑1 (MQ=255)
                                                                       tactaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTag                                                                              >  3:636717/1‑150 (MQ=255)
                                                                         ctaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTagag                                                                            >  2:424528/1‑150 (MQ=255)
                                                                         ctaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTagag                                                                            >  3:572090/1‑150 (MQ=255)
                                                                         ctaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTagag                                                                            >  2:1124163/1‑150 (MQ=255)
                                                                          taAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGTAC‑AGTAAC‑GCCCCGTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAgaga                                                                           >  1:1151522/1‑150 (MQ=255)
                                                                            aaaaaGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaag                                                                         >  3:12547/1‑150 (MQ=255)
                                                                             aaaaGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaaga                                                                        >  1:625610/1‑150 (MQ=255)
                                                                             aaaaGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaaga                                                                        >  2:658659/1‑150 (MQ=255)
                                                                              aaaGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAagag                                                                       <  4:358039/150‑1 (MQ=255)
                                                                                 gTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCt                                                                    <  4:820169/150‑1 (MQ=255)
                                                                                       ctgAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGAc                                                              >  4:369161/1‑150 (MQ=255)
                                                                                          aaCAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGATAGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCa                                                           >  2:922178/1‑150 (MQ=255)
                                                                                                    tGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTg                                                 >  3:336673/1‑150 (MQ=255)
                                                                                                    tGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTg                                                 >  2:998855/1‑150 (MQ=255)
                                                                                                     gACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGc                                                <  1:262141/150‑1 (MQ=255)
                                                                                                       cAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAg                                              <  1:1355304/150‑1 (MQ=255)
                                                                                                       cAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAg                                              <  1:1347326/150‑1 (MQ=255)
                                                                                                        aaCGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAgg                                             >  3:380143/1‑150 (MQ=255)
                                                                                                        aaCGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAgg                                             >  1:485392/1‑150 (MQ=255)
                                                                                                           gCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGaca                                          >  3:494564/1‑150 (MQ=255)
                                                                                                              attattGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACgg                                       <  4:604766/150‑1 (MQ=255)
                                                                                                                          gCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCAtgatga                                                                                   <  1:336127/94‑1 (MQ=255)
                                                                                                                          gCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCAtgatga                                                                                   >  2:336127/1‑94 (MQ=255)
                                                                                                                          gCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATg                           >  1:765355/1‑150 (MQ=255)
                                                                                                                          gCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAACAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGAGGCGGGCAGGACACGGATGACCGAGATg                           >  2:1051031/1‑150 (MQ=255)
                                                                                                                           ccAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATgg                          <  1:998855/150‑1 (MQ=255)
                                                                                                                                aTAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATc                     <  4:17978/150‑1 (MQ=255)
                                                                                                                                   tgCTAAGGTTGAAGGGGC‑‑GTTCCAGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGcc                  >  2:170870/2‑150 (MQ=38)
                                                                                                                                      tAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAAc               >  3:73272/1‑150 (MQ=255)
                                                                                                                                      tAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAAc               >  1:759295/1‑150 (MQ=255)
                                                                                                                                      tAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAAc               <  4:336673/150‑1 (MQ=255)
                                                                                                                                      tAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAAc               >  2:163249/1‑150 (MQ=255)
                                                                                                                                         ggTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGt                                                                                                                       >  2:326857/1‑43 (MQ=255)
                                                                                                                                         ggTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGt                                                                                                                       <  1:326857/43‑1 (MQ=255)
                                                                                                                                          gTTGAAGGGGC‑TGGAAC‑GCCGCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTCGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATAGGCATCGCCAACCAGa           <  4:834622/150‑1 (MQ=255)
                                                                                                                                           ttGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGAc          >  2:1017294/1‑150 (MQ=255)
                                                                                                                                            tGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACt         <  1:424528/150‑1 (MQ=255)
                                                                                                                                            tGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACt         <  1:1124163/150‑1 (MQ=255)
                                                                                                                                            tGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACt         >  4:600526/1‑150 (MQ=255)
                                                                                                                                             gAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTca                                                                                                           >  1:1037148/1‑51 (MQ=255)
                                                                                                                                             gAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTca                                                                                                           <  2:1037148/51‑1 (MQ=255)
                                                                                                                                             gAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAAc               <  1:362031/143‑1 (MQ=255)
                                                                                                                                             gAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAAc               >  2:362031/1‑143 (MQ=255)
                                                                                                                                             gAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTg        >  4:711070/1‑150 (MQ=255)
                                                                                                                                               aGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGgctgct      <  2:625610/150‑1 (MQ=255)
                                                                                                                                                 gggC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCaa                                                          >  1:1300676/1‑96 (MQ=255)
                                                                                                                                                 gggC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCaa                                                          <  2:1300676/96‑1 (MQ=255)
                                                                                                                                                 gggC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCACCCAGACCGCCaa    >  1:192640/1‑150 (MQ=255)
                                                                                                                                                 gggC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTaa    >  2:816293/1‑150 (MQ=255)
                                                                                                                                                   gC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAAtt  >  2:739936/1‑150 (MQ=255)
                                                                                                                                                   gC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAAt   >  3:258653/1‑149 (MQ=255)
                                                                                                                                                   gC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAAt   <  4:258653/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
GAGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGC‑TGGAAC‑GCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATT  >  NC_000913_3_hsa_tpiA/59148‑59444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.