| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 2729443 = | 23 (0.630) | 3 (0.090) | 3/256 | NT | 12.4% | noncoding (2/76 nt) | gltW | tRNA‑Glu |
| ? | NC_000913_3_hsa_tpiA | 2729485 = | 21 (0.620) | intergenic (‑41/+131) | gltW/rrsG | tRNA‑Glu/16S ribosomal RNA of rrnG operon | |||||
TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAA > NC_000913_3_hsa_tpiA/2729340‑2729631 | tccgCGACTTTCACTCACAAAGCAGCCAGTGGCGTCCCCTAGGGGATTCGAACCGACGTTACCGCCGTGAAAGGGCGGTGGCCTGGGTCTCTATATTACGGTTACATGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAggg < 1:498571/146‑1 (MQ=1) cacagattgtctgatgaaaagtgaatagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGt > 2:357989‑M1/103‑149 (MQ=255) tccctcacAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCa < 1:556931/146‑1 (MQ=1) cggaCCCGTGGTACCGGCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACTAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCa < 2:462947/146‑1 (MQ=1) ttccggTTACTGCGGTGAAAGGGCGGTGTCGTGGGCATCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGCTATTTTCGTGTAGGCTGAGCCTTCATTATTAGAAAGCGACCGGCCTTATTCACTTCAGCCTCACTcc < 2:606400/144‑1 (MQ=1) tgaagagaataaggccgttcgctttctattaatgaaagctcaccctACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAg > 1:37556‑M1/47‑90 (MQ=255) tgaagagaataaggccgttcgctttctattaatgaaagctcaccctACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAg < 2:37556‑M1/44‑1 (MQ=255) cGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt < 2:11174/149‑1 (MQ=32) cGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt < 1:505750/149‑1 (MQ=32) ggTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGCACGGCCTTATTCTCTTCCGCCTCACACCCAACGCGTACACGCCTCGCTATTc > 2:334563/1‑149 (MQ=11) tGGTCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtc < 2:331557/149‑1 (MQ=21) tGGGCCTCTAGAGGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTATCGGGTGAGGTTTCATTAATAGAAAGCGAACGGCCTGATTCTCTTCACCATCACTCCCAACGTCTGCATGCCTTGGTATTCACTTTtc > 2:390736/1‑149 (MQ=11) tGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtc > 1:166698/1‑149 (MQ=33) ggCCTTTAGACGAAGGGGACACGAAAATTGCTTAACACACGTTGCGTGATATGTGCGTGTAGGGTGAGCTTTCATTGATAGAAAAGTAACCGCTGTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCTTTGTTATTCACTTTtcat < 2:316801/149‑1 (MQ=11) ctccTCTATACGAAGTAGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcat < 2:659568/147‑1 (MQ=255) ctctAGACGAAGGGGACACGCAAATTGCATATCAAGCATTGCCTGCTACTTTCGTCTAGGGTACTCTTTCATGAATAGAAAGCGAATGGCCTTATTCTCTTCCGCCTCACTACCAACGCGAAAACGCCTTCCAATCCACTTTtcatccg > 2:135631/1‑147 (MQ=2) ctctAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCCGCCTCACTCCCAACGCGTAAACGCCTTGCTCTTCACTTTTCATCAg > 2:388267/1‑149 (MQ=25) aGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATCTTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCATTATTCACTTCAGCCTCACTCCCAACGCGTACCCGCCTTGCTATTCACTTTTAATCAGGCac > 2:75093/1‑148 (MQ=11) gAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtg > 2:265986/1‑149 (MQ=38) gAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCACAACGCGTAAAAGCCTTGCTATTCATTTTTCATCAGAAAATCtg > 1:328175/1‑149 (MQ=255) accctacacgaaaatatcacgcaacgcgtgataagcaattttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtg > 2:357989‑M2/48‑149 (MQ=255) agcgACACGCAAATTTCTTCTCTCGCTTTGTTTGTTATTTGCGTGTAGGGTGATCTTTCATTAATAAAAAGCGAACGGCCTTATTCTCTTCATCCTCTCTCCCACCGCGTAAACGCCTTGCTATTCCCTTTTCATCAGACAATCtgtgt < 2:202336/146‑1 (MQ=11) ctacacgaaaatatcacgcaacgcgtgataagcaattttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCa > 1:37556‑M2/45‑90 (MQ=255) ctacacgaaaatatcacgcaacgcgtgataagcaattttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCa < 2:37556‑M2/46‑1 (MQ=255) ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCAc > 1:50546‑M1/1‑149 (MQ=255) ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCAc > 2:427574‑M1/1‑149 (MQ=255) GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg < 1:640240‑M1/149‑1 (MQ=255) GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATATGTGTGAGCACTg < 1:640236‑M1/149‑1 (MQ=255) GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAACCTGTGTGAGCACTg < 1:402566‑M1/149‑1 (MQ=255) gCTTAGCACGCGTTGCTGGATATTTTCGTTTAGGGTGAGCTTTTATTAATAGAAAGCGTACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACCATCTGTGTGGGCATCGCAAAGTa < 2:599814/149‑1 (MQ=14) aCGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAACTCGATCGGCCTTATTCTCTTCATCCTCACTCCCAACACGTAAACGCCTTGCTATTCACTTTTCTTCAGACCATCTGTCTGAGCACTGTAAAGTATGcttat > 2:106647/1‑147 (MQ=14) gcgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTCTTCTCTTCAGCCTCCCTCCCAACGCGTCACCCCCTTGCTATTCACTTTTCCTAAAACAATCTGTGTGCGCACTGCCAGTTACGCTTCgtt > 2:401493/1‑149 (MQ=14) ttGCGTGATATTTTCGTGTAGGGAGAGCCTTCAGTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaag < 2:486971/149‑1 (MQ=255) tatTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAaggag > 1:593833/1‑149 (MQ=255) ttttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGCCAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGt > 1:450781‑M2/10‑149 (MQ=255) ttttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCAATTAACGTTCCATCAGTTCTGGTTGGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGt < 1:507957‑M2/140‑1 (MQ=255) tcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGAt < 1:107039‑M2/143‑1 (MQ=255) gtAGGGTGAGCTTTCATTAATAGAAAGCGACCGGCCTTATTCTCTTCAGCCTCACTCTCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCaa < 2:479023‑M2/147‑1 (MQ=255) gtAGGGTGAGCTTTCATTAATACAAAGCGAACGGCCTTATCCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCaa < 1:180390‑M2/147‑1 (MQ=255) | TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAA > NC_000913_3_hsa_tpiA/2729340‑2729631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |