New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 2257359 =28 (0.970)6 (0.220) 4/270 3.4 19.1% intergenic (‑24/+70) psuT/psuG putative nucleoside transporter/pseudouridine 5'‑phosphate glycosidase
?NC_000913_3_hsa_tpiA 2257383 = 24 (0.860)intergenic (‑48/+46) psuT/psuG putative nucleoside transporter/pseudouridine 5'‑phosphate glycosidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAGCGATTTGCAGCAGCAGTGCGGCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCGTTGTTGAACACCAGCTGGATGTTG  >  NC_000913_3_hsa_tpiA/2257212‑2257504
                                                                                                                                                   |                                                                                                                                                 
tAGCGATTTGCAGCAGCAGTGCGGCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAACTGCTATTGCCAGTAACACCACCATCCCCACAACACTTATCATTATATCCATAATGATTTTCCCTTACTGCCGGTaa                                                                                                                                                  >  1:137721/1‑149 (MQ=255)
    gATTTGCAGCAGCAGTGCGGCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAAccc                                                                                                                                              >  1:250870/1‑149 (MQ=255)
       ttGCAGCAGCAGTGCGGCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGc                                                                                                                                           <  1:448096/149‑1 (MQ=255)
                  gTGCGGCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAg                                                                                                                                <  1:359146/149‑1 (MQ=255)
                       gCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGtttt                                                                                                                           <  1:215542/149‑1 (MQ=255)
                       gCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGtttt                                                                                                                           <  2:369825/149‑1 (MQ=255)
                        cTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTGGGGTGAGTAACATCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTg                                                                                                                          <  1:226545/149‑1 (MQ=255)
                            aaCCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCAGGTAAACCCGGCGTCAGCGCCAGGGTTTGGTAt                                                                                                                      >  2:317331/1‑149 (MQ=255)
                                  tcgcAAAGTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAAAACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTtga                                                                                                                <  2:50351/148‑1 (MQ=255)
                                                   ttttATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTgg                                                                                                                         <  2:438679/123‑1 (MQ=255)
                                                   ttttATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTgg                                                                                                                         >  1:438679/1‑123 (MQ=255)
                                                       aTTCAATGACAACAGAAATGCCATTGCCAGTAACACCATCATCCCCACAGCACTTCTCATTATATCCTTAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTc                                                                                           <  2:125145/149‑1 (MQ=255)
                                                                            tATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCcg                                                                      >  1:232925/1‑149 (MQ=255)
                                                                                  cAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCATCAGCGCCAGGTTTAGGTGCACGTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCcgacagcc                                                                >  1:118761/1‑143 (MQ=255)
                                                                                    gTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACg                                                                                                 >  1:261431/1‑114 (MQ=255)
                                                                                    gTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACg                                                                                                 <  2:261431/114‑1 (MQ=255)
                                                                                                tCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTg                                                  <  1:453857/149‑1 (MQ=255)
                                                                                                 ccccAGATCACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTgg                                                 <  1:192764/149‑1 (MQ=255)
                                                                                                    cacaACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGc                                                                                                     >  1:442072/1‑94 (MQ=255)
                                                                                                    cacaACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGc                                                                                                     <  2:442072/94‑1 (MQ=255)
                                                                                                     acaacaCTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAAt                                             >  2:364174/1‑149 (MQ=255)
                                                                                                            ttCTCATTATATCCCTAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCACCGCCAGGTTTTGGAATGCTTGATGTGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAATCTGCGAGACGGTGCTATTCTTTGGCAATTtcgctc                                      >  2:466161/1‑149 (MQ=255)
                                                                                                                          aTAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCgtt                        >  1:455295/1‑149 (MQ=255)
                                                                                                                          aTAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCgtt                        >  2:75902/1‑149 (MQ=255)
                                                                                                                                agttgcccTTGGTGCCGGTAAACGCGGCGTGCGCGCCAGGTTTTGGTATGCTTGGTGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAAGTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCGTTGTTGaa                  <  2:9245/144‑1 (MQ=255)
                                                                                                                                 ttttCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCGTTGTTGAac                 <  2:455295/149‑1 (MQ=255)
                                                                                                                                               cGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCGTTGTTGAACACCAGCTGGATGtt   <  1:345835/149‑1 (MQ=255)
                                                                                                                                                gatAAGCCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCGTTGTTGAACAGCAGCTGGATGTTg  <  1:108373/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TAGCGATTTGCAGCAGCAGTGCGGCTCCAACCGTGCGCAAACTGATGCTCTTTTTATTCACTGACAACAGAAATGCTATTGCCAGTAACACCACCATCCCCACAACACTTCTCATTATATCCATAATGATTTTCCCTTCATGCCGGTAAACCCGGCGTCAGCGCCAGGTTTTGGTATGCTTGATGAGTACGGGCGACGGCTTTCTGCCCGTCAGAAATTAACCCGCGAGACGCTGATATTCTTTGGCAATTTCGCTCGCCAGAATGGCGTTGTTGAACACCAGCTGGATGTTG  >  NC_000913_3_hsa_tpiA/2257212‑2257504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.