New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2731302 =	13 (0.450)	4 (0.140)	4/278	3.5	23.7%	intergenic (‑145/+298)	rrsG/clpB	16S ribosomal RNA of rrnG operon/protein disaggregation chaperone
	?	NC_000913_3_hsa_tpiA	= 4035358	NA (NA)					intergenic (+205/‑173)	hemG/rrsA	protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon
Rejected: Coverage evenness skew score above cutoff.

TGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCACTCTTGAGACTTGGTATTCATTTTTCGTCTTGCGACGTTAAGAATCCG‑TATCTTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT  >  NC_000913_3_hsa_tpiA/2731168‑2731444                                                                                                                                        |                                                                                                                                               tGCTCAAAGAATGAAACTTCGTAATGAATTACGTGTTCACTCTTGAGACTTGGTATTCATTTTTCGTCTTGCGACGTTAAGAATCCG‑TATCTTCGAGTGCCCACACAGATTGTCTCATAAATTCTTACAGAGCAGTGCCGCTTCGCttt                                                                                                                                  <  2:171119/149‑1 (MQ=2)   cttaaaGAATCAAACCTCGTCATGAATCACCTGTTCACACAAGCATCTTGTTCTTCATTTTTCGTCTTGCGACGTTAAGAATCAGCCGTCTT‑ACGGGCCCTCACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCttttt                                                                                                                                <  1:300350/146‑1 (MQ=0)                                                                   tCTTGCGACGTTAAGAATCCG‑TATCTTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGC‑GGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTtc                                                               >  1:210423/1‑149 (MQ=255)                                                                        cGACGTTAAGAGTCCG‑TATCTTCGAGTGCCCAGACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg                                                           <  2:47967/149‑1 (MQ=255)                                                                                    tCCG‑TATCTTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa                                               <  2:13219/149‑1 (MQ=255)                                                                                     ccG‑TATCTTCGAGTGCCCACACAGAGTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg                                              <  2:46161/149‑1 (MQ=255)                                                                                                gAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCACTTCTTTGCTTTTCTCTGTTAAGATTCTCAGAAAAACCccg                                    >  1:267654/1‑149 (MQ=255)                                                                                                      ccACACAGATTGTCTGATAAACTGTTAAAGAGCACTGCCGCATCGCTTTTTCTCAGCGCCCCGCGGTGTACATAATCCGCCTTCCCACCACAGCGTCCACCATATCATTGCTTTTCTCTGCTCACATCCTCCCGAGACCCccgcccccc                              >  2:178265/1‑145 (MQ=9)                                                                                                                    tGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg                >  1:87451/1‑149 (MQ=255)                                                                                                                    ggATAAATTGTTAAAGAGCAGTGACGGGTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCCCCACAGAGTCAAGCACTTCTTTGCTTTTCTCTGTTGAGCTTCCCAGGAGAACCCCGCCGACCCGGCGGCGTGCTTg                >  2:262133/2‑149 (MQ=17)                                                                                                                      aTAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGCTGGGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCACGCCGACACGGCGGCGTGATTGcc              >  1:229531/1‑149 (MQ=18)                                                                                                                          aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttg          >  2:208711/1‑149 (MQ=255)                                                                                                                                  agagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGCCGGCGTGTTTGCCGTTGTTCCgtgt  >  2:401054/1‑149 (MQ=255)                                                                                                                                        |                                                                                                                                               TGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCACTCTTGAGACTTGGTATTCATTTTTCGTCTTGCGACGTTAAGAATCCG‑TATCTTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGT  >  NC_000913_3_hsa_tpiA/2731168‑2731444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.