New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 1031600	30 (0.900)	4 (0.130)	4/258	4.0	12.6%	intergenic (‑182/+25)	yccA/serT	Modulator of FtsH protease, inner membrane protein/tRNA‑Ser
	?	NC_000913_3_hsa_tpiA	= 1031605	28 (0.910)					intergenic (‑187/+20)	yccA/serT	Modulator of FtsH protease, inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATAATGCGTAAGGGCACCCAGAAGTTTTACCCATCTTTACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGAATGACGCGCACTATAAACATCCCGATG  >  NC_000913_3_hsa_tpiA/1031463‑1031742                                                                                                                                          |                                                                                                                                               tataaggCGTAAGGGCACGCATAAGTTTTACCCATCTTTACGCATTTGATCGGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAAc                                                                                                                                     <  2:399041/148‑1 (MQ=255) gataatgCGTAAGGGCACCCAGAAGTTTTACCCATCTTTACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATACAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAAc                                                                                                                                     <  2:161214/149‑1 (MQ=255)          tAAGGGCACCCAGAAGTTTTACCCATCTTTACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATGTCGACAGGCAAAAGAAAAAGGGGTTAGCTAAATGCTAACCCctttttc                                                                                                                            <  2:307518/149‑5 (MQ=255)                                ccATCTTTAGGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGAt                                                                                                      <  2:413893/149‑1 (MQ=255)                                ccATCTTTACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGAt                                                                                                      >  1:460379/1‑149 (MQ=255)                                  aTCTTTACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTc                                                                                                    >  2:525262/1‑149 (MQ=255)                                     tttACGCATTTGATTCGGCAAAGGTTTAACAGCGGATTATCAGGTCACTAAGTAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGaa                                                                                                 <  1:271653/149‑1 (MQ=255)                                     tttACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGaa                                                                                                 >  2:301553/1‑149 (MQ=255)                                             tttGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGCAAGCGCAGAGATTCGAACTCTGGaa                                                                                         >  2:81401/1‑149 (MQ=255)                                                      gAACAGGCTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCgg                                                                                <  1:206035/149‑1 (MQ=255)                                                       aaCAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCggc                                                                               >  2:448668/1‑148 (MQ=255)                                                            gTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGcc                                                                          >  1:394624/1‑149 (MQ=255)                                                            gTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTAGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGcc                                                                          >  1:263043/1‑149 (MQ=255)                                                             ttaaaCAGCGAATTAGAAGGTCATTAAGCAAATATAACGCCCTGTGAATTTCGACAGGCAAAAGAGAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCg                                                                         <  2:324102/146‑1 (MQ=255)                                                                    gCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGGTGCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCa                                                                  >  1:310511/1‑149 (MQ=255)                                                                        aTTATGAGGTCATTAAGCAAATATTACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGAc                                                              <  1:45374/149‑1 (MQ=255)                                                                            tCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGAGGACGCGCAGAGAGTCGAACACTGTAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGt                                                          >  2:124191/1‑149 (MQ=255)                                                                              aGGTCATTGAGTAAGTGTGGCGCTCTGGGGTTTTCGACGGGCAAAAGAGGAGGGGGTTAGCATTTAGCTTACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGATGTCTGGTGCGCTTTCGGGTCGCCGGTTTTCAAGACCGGTGc                                                        <  2:394624/149‑1 (MQ=255)                                                                                 gcATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGCTAAGAATTTCGATACCTCCGTGTTTTATGGGGGGGTGGCGCGGGGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCGAAGCCGGTGCCtt                                                     <  1:411130/148‑1 (MQ=255)                                                                                      aaGCAAATATAACGCCCTGAGAATTTCGACATGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAAcc                                                >  2:422599/1‑149 (MQ=255)                                                                                          aaaTATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTc                                            <  1:5694/149‑1 (MQ=255)                                                                                            atctaACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCgg                                          <  1:251672/146‑1 (MQ=255)                                                                                                       tGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCg                               <  2:263043/149‑1 (MQ=255)                                                                                                          gaATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTATCCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGaa                            <  1:460578/149‑1 (MQ=255)                                                                                                          gaATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGaa                            <  1:124191/149‑1 (MQ=255)                                                                                                           aaTTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGAAt                           <  1:301553/149‑1 (MQ=255)                                                                                                                         aaaGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCa                                                   <  2:372096/111‑1 (MQ=255)                                                                                                                         aaaGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCa                                                   >  1:372096/1‑111 (MQ=255)                                                                                                                               aaaGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGAATGACGCGCACTATAAACATcc       <  1:399901/149‑1 (MQ=255)                                                                                                                               aaaGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGAATGACGCGCACTATAAACATcc       >  1:192495/1‑149 (MQ=255)                                                                                                                                    ggTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGAATGACGCGCACTATAAACATCCCGATg  >  2:317118/1‑149 (MQ=255)                                                                                                                                          |                                                                                                                                               GATAATGCGTAAGGGCACCCAGAAGTTTTACCCATCTTTACGCATTTGATCTGGAACAGGTTTAACAGCGGATTATCAGGTCATTAAGCAAATATAACGCCCTGAGAATTTCGACAGGCAAAAGAAAAAGGGGTTAGCATTTAGCTAACCCCTTATCTTATTTGGCGGAAGCGCAGAGATTCGAACTCTGGAACCCTTTCGGGTCGCCGGTTTTCAAGACCGGTGCCTTCAACCGCTCGGCCACACTTCCGGAATGACGCGCACTATAAACATCCCGATG  >  NC_000913_3_hsa_tpiA/1031463‑1031742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.