New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2434769 =	29 (0.870)	4 (0.130)	4/256	4.0	13.7%	intergenic (‑28/+55)	dedA/truA	DedA family inner membrane protein/tRNA pseudouridine(38‑40) synthase
	?	NC_000913_3_hsa_tpiA	2434804 =	24 (0.790)					intergenic (‑63/+20)	dedA/truA	DedA family inner membrane protein/tRNA pseudouridine(38‑40) synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACAGAACAAAATTAAGAACAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGC  >  NC_000913_3_hsa_tpiA/2434625‑2434913                                                                                                                                                 |                                                                                                                                                 acaGAACAAAATTAAGAACAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCa                                                                                                                                              <  2:45871/149‑1 (MQ=255) acaGAACAAAATTAAGAACAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCa                                                                                                                                              >  2:245694/1‑149 (MQ=255)   aaaagcaaaTCAAGAACAAGATGGCACAAACCCAGACCCGGCTCTCCGCGACCAGCGCTGACAGATGCACGTCAATGCGCAGTATAAAATCGATGAGGAAATCAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAgg                                                                                                                                            <  2:111562/143‑1 (MQ=255)   aGAACAAAATTAAGAACAAAATGGCCTAAGCCCAGACGGCGTAAACAGCCACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAgg                                                                                                                                            <  1:516846/149‑1 (MQ=255)    gAACAAAATTAAGAACAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGc                                                                                                                                           <  1:245694/149‑1 (MQ=255)     aaCAAAATTAAGAACAAAATGGCAGAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCt                                                                                                                                          <  1:361559/149‑1 (MQ=255)        aaaaTTAAGAACAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTa                                                                                                                                       >  1:180331/1‑149 (MQ=255)                 aaCAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTACCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTg                                                                                                                              >  2:285955/1‑149 (MQ=255)                      aaTGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTAc                                                                                                                         >  1:190602/1‑149 (MQ=255)                         ggCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGc                                                                                                                      <  2:190602/149‑1 (MQ=255)                                agccAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAAt                                                                                                               <  2:146245/147‑1 (MQ=255)                                aCCCAGACGCCGTACTCCGCGACCAGCCCCGCCAGATGCACGACAACGTGCAGGATAAAACCGATCAGGACATACATCAGTTCCATATCCGCCCATGCATTCTCCTCGTGCTCTTTGCGGCTCTAACTACCTTCGCCCCACCCTGACAt                                                                                                               >  2:27582/1‑149 (MQ=255)                                    aGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTc                                                                                                           <  1:90072/149‑1 (MQ=255)                                     tatgtagTACTCCGTGACCAGCTCGTCCAGATGTGCGTCAATTGGCAGGATAAAAGCGATGAGTAAATATCTCAGGGCCATATTCGCCGATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTcc                                                                                                          <  2:244001/143‑1 (MQ=255)                                                    gACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGt                                                                                           <  1:481034/149‑1 (MQ=255)                                                                       aCGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCGTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTAGTTTGTACGCCAGCAATTGCg                                                                        >  2:312561/1‑149 (MQ=255)                                                                                   aGGATAAAATCGATGGGGAAATAAATCAGGTCCATAGTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAGCGGCGGGCCCATTGGCg                                                            <  2:218297/149‑1 (MQ=255)                                                                                   aGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTCAAATGTTCCGTGCAGGATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCg                                                            <  2:506056/149‑1 (MQ=255)                                                                                          aaTCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCGTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGCCATAGCGGGCCCATTGGCGGTTTTgg                                                     >  1:576795/1‑149 (MQ=255)                                                                                                    gAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATc                                               >  1:464893/1‑145 (MQ=255)                                                                                                    gAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATc                                               <  2:464893/145‑1 (MQ=255)                                                                                                            tCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGtt                                                         <  1:450794/127‑1 (MQ=255)                                                                                                            tCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGtt                                                         >  2:450794/1‑127 (MQ=255)                                                                                                                gTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTaa                               >  1:551760/1‑149 (MQ=255)                                                                                                                   cATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGGTTTGGAAGATCATACCGGTCAAGGGAATcc                            >  2:573088/1‑149 (MQ=255)                                                                                                                        ttGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACcgc                       <  1:285955/149‑1 (MQ=255)                                                                                                                              aTGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAg                 >  2:305196/1‑149 (MQ=255)                                                                                                                                 ccTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATa              <  2:551760/149‑1 (MQ=255)                                                                                                                                             cATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGc  >  1:439903/1‑149 (MQ=255)                                                                                                                                                 tttCAGGCTGTAGCCAACGTAGTTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTcc    <  2:12215/143‑1 (MQ=38)                                                                                                                                                 |                                                                                                                                                 ACAGAACAAAATTAAGAACAAAATGGCATAAACCCAGACGCCGTACTCCGCGACCAGCTCTGCCAGATGCACGTCAATGTGCAGGATAAAATCGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGC  >  NC_000913_3_hsa_tpiA/2434625‑2434913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.