New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 183661	56 (1.000)	9 (0.170)	7/260	5.8	14.9%	intergenic (+41/+48)	cdaR/yaeH	carbohydrate diacid regulon transcriptional regulator; autoregulator/UPF0325 family protein
	?	NC_000913_3_hsa_tpiA	= 183674	51 (0.980)					intergenic (+54/+35)	cdaR/yaeH	carbohydrate diacid regulon transcriptional regulator; autoregulator/UPF0325 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTC  >  NC_000913_3_hsa_tpiA/183530‑183819                                                                                                                                                 |                                                                                                                                                  tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAgg                                                                                                                                               >  1:23842/1‑149 (MQ=255)  cGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAggg                                                                                                                                              <  2:753914/149‑1 (MQ=255)   gTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAgggg                                                                                                                                             >  1:615640/1‑149 (MQ=255)          ggAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGccc                                                                                                                                      <  2:191430/149‑1 (MQ=255)           gAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGCAGAGTGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCACGCACGGGAGAGGGGTATGCCCg                                                                                                                                     >  2:58070/1‑149 (MQ=255)           gAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCg                                                                                                                                     >  2:656066/1‑149 (MQ=255)           gAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCg                                                                                                                                     >  2:259357/1‑149 (MQ=255)                   cGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAcc                                                                                                                             >  1:732061/1‑149 (MQ=255)                   cGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGATGGCCATGCGTTCTGGTTGAGGCGGCGCTGGCTCTTTCCCCCCAGCACTAAGGGTAGAGGGGAATGCCCGAATTAAcc                                                                                                                             >  2:87236/1‑149 (MQ=255)                        ttGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCGGAAGGGTAGAGGGGAATGCCCGAATTAACAGTCAg                                                                                                                        >  1:373649/1‑149 (MQ=255)                             ttGGGCAATTTCGATGACAGGTTGCTGCCGTATGTGGCGTTACAAGTGGATGGAGAGCGGGAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCGGACCGAAGGGTAGAGGGGAATGCCCGAATTAGCCGTCAGTTCgg                                                                                                                   <  1:664987/149‑1 (MQ=255)                                   aaTTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGattat                                                                                                             >  2:68927/1‑149 (MQ=255)                                           tgaCAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGt                                                                                                     <  1:882974/149‑1 (MQ=255)                                                ggTGGCTGCTGTATGGGCCGTAATAACCGGAGGAAGAGGGGTAGGTTATTCGTTAGTGTTGAGGCGGCGCTGGCTCCGTCCCCGCAGCCTGTATGGTAGAGGGGAATGCCCGATTTATCCGTCAGTTCGGGATTATTTACGCGTTAGtt                                                                                                <  2:619565/149‑1 (MQ=255)                                                 gTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGttt                                                                                               >  1:162318/1‑149 (MQ=255)                                                  ttGCTGCTGGATGTTGCGGTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTTACCGTCAGTTCGGGATTATTTACGCGTTAGtttt                                                                                              <  2:94079/149‑1 (MQ=255)                                                  ttGCTGCTGGATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCCGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGtttt                                                                                              <  1:538002/149‑1 (MQ=255)                                                      tgctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGGTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGAGGGATGCCCGAATTAACCGTCAGTTCGGAATTATTTACGCGTTAGTTTTTCCa                                                                                          >  2:764574/1‑149 (MQ=255)                                                        ctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGa                                                                                        >  1:295144/1‑149 (MQ=255)                                                         tgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGAt                                                                                       <  1:508565/149‑1 (MQ=255)                                                              gtgGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCt                                                                                  <  1:259357/149‑1 (MQ=255)                                                              gtgGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCt                                                                                  >  1:933159/1‑149 (MQ=255)                                                                      aCAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAAtctc                                                                          <  1:412375/149‑1 (MQ=255)                                                                       cAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGATGGGTAGAGGGGAATGCCCGAATTACCCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAAtctct                                                                         <  2:750723/149‑2 (MQ=255)                                                                        aaCTGGATGAAGATCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCCCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTCACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAACCTCGc                                                                        <  1:58070/149‑1 (MQ=255)                                                                        aaCTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAGACAGCCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGc                                                                        >  1:725508/1‑149 (MQ=255)                                                                         aCTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGCGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCGCGCt                                                                       >  2:778503/1‑149 (MQ=255)                                                                           tGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCt                                                                                  >  1:191432/1‑136 (MQ=255)                                                                           tGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCt                                                                                  <  2:191432/136‑1 (MQ=255)                                                                             gATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATc                                                                   <  2:23842/149‑1 (MQ=255)                                                                             gATGAAGAGCGGTAGGTTATGCGTGAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATc                                                                   <  2:887474/149‑1 (MQ=255)                                                                                gAAGAGCGGTACTTTATGCGTTAAGGTTGAGGCGGCGCTGCCTCATTCCCCTCAGCCCGATGGGTCGAGGGGAATGCCCGAACTAACCGTCAGATCGGGATTATTTACGCGTTATTTTTTCCAGATCGTCATCAACCTCTCTGATCTTa                                                                <  2:783126/149‑1 (MQ=255)                                                                                  agagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTAtt                                                              <  1:661481/149‑1 (MQ=255)                                                                                   gagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCTGGATTATTTACGCGTTTGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTg                                                             <  2:870500/149‑1 (MQ=255)                                                                                     gcgtgaGGTTATGTGTTAAGGTTGAGGTGGCGCTGGCTCATTCCCCTAAGCCCGAAGGGTAGAGTGGCATGCCCGAATTAACCGTCAGTTCGGGATTATTTCCGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGt                                                           <  1:308566/144‑1 (MQ=255)                                                                                          aGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACga                                                      <  1:656066/149‑1 (MQ=255)                                                                                              tATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACgactga                                                  >  1:727410/1‑149 (MQ=255)                                                                                                   gTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCa                                             >  1:853210/1‑149 (MQ=255)                                                                                                    ttAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTAc                                                        >  2:904341/1‑137 (MQ=255)                                                                                                    ttAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTAc                                                        <  1:904341/137‑1 (MQ=255)                                                                                                      aaGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGt                                          <  1:507450/149‑1 (MQ=255)                                                                                                             aGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTaa                                   <  1:310889/149‑1 (MQ=255)                                                                                                                      cggCTCATTGCCCTCCGCCCGAAGGGTAGAGGGGAATGCCCGGATTAACCGTCAGTTCGGGATTATTTACGCGTTAGCCTTTTCAGCTCCGCTTCAACCTCGCTGATCTTATTGGTTACGACTGACTATAGGTGACGTAAGTCGTCGAg                          <  2:799369/148‑1 (MQ=255)                                                                                                                          tCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTAcgc                                                                                                       >  1:251246/1‑68 (MQ=255)                                                                                                                          tCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTAcgc                                                                                                       <  2:251246/68‑1 (MQ=255)                                                                                                                           caatgcccTCCGCCCGAAGGGTAGGGGGGAATGCCCGAATTACCCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCGCGCTGATCTTATTGGTGACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCt                     <  2:820953/144‑1 (MQ=255)                                                                                                                             ttCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTa                   >  1:447018/1‑149 (MQ=255)                                                                                                                                    cAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTaa            <  2:732061/149‑1 (MQ=255)                                                                                                                                       cccGAAGGGTAGAGGGGAATGTCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGAt         >  2:872312/1‑149 (MQ=255)                                                                                                                                        ccGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGACATTCCAGAACGGCACCTGAAGCTCGGAGCTTATTGGTTACCACGGGCTTCAGGTTACGTAAGTCGTCGAGGGTCTTACGCTTAAGATc        >  1:481956/1‑149 (MQ=255)                                                                                                                                           aaGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAAc     <  1:68927/149‑1 (MQ=255)                                                                                                                                           aaGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAAc     <  1:87236/149‑1 (MQ=255)                                                                                                                                               gTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTc  <  2:425548/148‑1 (MQ=255)                                                                                                                                               gTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTc  >  1:425548/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                  TCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTC  >  NC_000913_3_hsa_tpiA/183530‑183819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.