New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 4137880 =41 (0.880)6 (0.140) 6/258 5.0 14.5% intergenic (‑241/+34) yijF/gldA DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase
?NC_000913_3_hsa_tpiA 4137907 = 33 (0.770)intergenic (‑268/+7) yijF/gldA DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGAACAACGTGGGAGTTTCAGATTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGTTTCACCTTCTGC  >  NC_000913_3_hsa_tpiA/4137733‑4138027
                                                                                                                                                   |                                                                                                                                                   
cTGAACAACGTGGGAGTTTCAGATTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCa                                                                                                                                                    >  2:658732/1‑149 (MQ=255)
       acGTGGGAGTGTCAGATTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTACCTGGCCAACAAAATCACGCAAATTCTATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTccc                                                                                                                                             <  1:192822/149‑1 (MQ=21)
             gAGTTTCAGATTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAGGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACaa                                                                                                                                       <  2:731843/149‑1 (MQ=255)
             gAGTTTCAGATTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACaa                                                                                                                                       <  1:798949/149‑1 (MQ=255)
                tttCAGATTACTGGCACAGAGTGCCGGATGCGGAGAGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACACCCGGACAAGca                                                                                                                                    >  1:497975/1‑148 (MQ=255)
                tttCAGATTACTGGCACAGAGGGTCTGATGCGGTGTGGTTGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCGCCGACAAGcc                                                                                                                                    >  2:141721/1‑149 (MQ=18)
                      aTTACTGGCATAGAGTGCCGGATGCGGAGTGAACGCCTTATCCAGCCTCCCGTGCCATACAAAGTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGt                                                                                                                              <  1:645967/149‑1 (MQ=21)
                      aTTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGt                                                                                                                              <  1:599370/149‑1 (MQ=255)
                       ttACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGtt                                                                                                                             <  1:658732/149‑1 (MQ=255)
                           tGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGa                                                                                                                         >  2:327884/1‑149 (MQ=255)
                           tGGCACAGAGGGCCGAATGCGGAGTGAACGCCTTGTCCGGCCGACAGAAGCACGCAAATTCAATATACTGCCGAGATTGCGGAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTGAGGTCAAACGCCCGGACCAGACGGGAGATGGGa                                                                                                                         >  2:524902/1‑149 (MQ=17)
                               acaGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAg                                                                                                                     >  1:317380/1‑149 (MQ=255)
                               acaGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAg                                                                                                                     <  2:605819/149‑1 (MQ=255)
                                caGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAgg                                                                                                                    <  1:449925/149‑1 (MQ=255)
                                   agTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACCCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACACGCAGGGAGTTTGGAGTACGTTa                                                                                                                 <  2:696617/149‑1 (MQ=255)
                                     tGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTAtt                                                                                                               <  1:129062/149‑1 (MQ=255)
                                       ccGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTcc                                                                                                             <  1:689574/149‑1 (MQ=255)
                                         ggttGCGGAGTGCACGCCTTATCCTGCCTACAAAAGCACGCAAATTCAAGATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCa                                                                                                           <  1:793284/146‑1 (MQ=255)
                                         ggATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCa                                                                                                           <  2:372631/149‑1 (MQ=255)
                                         ggATGCGAAGTGAACGCCTTATCCGTACTACAACATCACGCAAATTTAATTTATTTCAGCGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAGTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGATTAGGTTATTCCCa                                                                                                           <  2:355266/149‑1 (MQ=21)
                                          gATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTccctc                                                                                                          <  2:56260/149‑3 (MQ=255)
                                                gAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGCGCTTGGAGTAGGTTATTCCCACTCTTGc                                                                                                    >  1:584121/1‑149 (MQ=255)
                                                     aaCGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGGGTTTGGAGTAGGTTATTCCCCCTCTTGCAGGaa                                                                                               >  1:181342/1‑149 (MQ=255)
                                                       cGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCaa                                                                                                                                                   >  1:497214/1‑95 (MQ=255)
                                                       cGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCaa                                                                                                                                                   <  2:497214/95‑1 (MQ=255)
                                                       cGCCTTATCCGGCCTAAAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAAc                                                                                             <  1:263484/149‑1 (MQ=255)
                                                             aTCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGAc                                                                                       <  1:515924/149‑1 (MQ=255)
                                                                                gCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAGACTCCCGGACACGCCGGGAGTTTGGAGTAGATTATTCCCACTCTTGCAGGAAACGCTGAGCGTACTGGGCGGCTACcag                                                                    >  1:159879/1‑149 (MQ=37)
                                                                                         atatatTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAgcggc                                                           <  2:317380/149‑1 (MQ=255)
                                                                                         atatatTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAgcggc                                                           >  1:251918/1‑149 (MQ=255)
                                                                                                                                cATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTg                                                                                         <  2:435526/80‑1 (MQ=255)
                                                                                                                                cATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTg                                                                                         >  1:435526/1‑80 (MQ=255)
                                                                                                                                  tCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGaa                  <  2:480180/149‑1 (MQ=255)
                                                                                                                                    aGGCAATTTTGCGTTCACACGGCATTGCAAGCCCGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATg                <  2:584121/149‑1 (MQ=255)
                                                                                                                                      gCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTATCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGt              >  1:781955/1‑149 (MQ=255)
                                                                                                                                        aaTTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGttt            <  1:654551/149‑1 (MQ=255)
                                                                                                                                           tttGCGTTCAACCTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGTTTCAc         <  1:669676/149‑1 (MQ=255)
                                                                                                                                             ctacttCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCaga                                                                >  1:730260/5‑92 (MQ=255)
                                                                                                                                             ctacttCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCaga                                                                <  2:730260/88‑1 (MQ=255)
                                                                                                                                                 ttCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGCCATGTTGTGAATGGTTTCACCTTCTg   >  2:50835/1‑149 (MQ=255)
                                                                                                                                                  tCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGTTTCACCTTCTGc  <  1:159951/149‑1 (MQ=255)
                                                                                                                                                  ccAAACGCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGTTTCACCTTCTGc  <  1:327884/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CTGAACAACGTGGGAGTTTCAGATTACTGGCACAGAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTCAAACTCCCGGACAAGCCGGGAGTTTGGAGTAGGTTATTCCCACTCTTGCAGGAAACGCTGACCGTACTGGTCGGCTACCAGCAGAGCGGCGTAAACCTGATCTGGCGTCGCGCCGCCAGGCATGTTGTGAATGGTTTCACCTTCTGC  >  NC_000913_3_hsa_tpiA/4137733‑4138027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.