| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3576736 | 75 (0.740) | 11 (0.110) | 9/284 | 9.2 | 13.1% | coding (326/1341 nt) | gntU | gluconate transporter, low affinity GNT 1 system |
| ? | NC_000913 | = 3576763 | 74 (0.760) | coding (299/1341 nt) | gntU | gluconate transporter, low affinity GNT 1 system | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACCAGAAATGCCGCCGCTGCCGCCACGCCTGCAAATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3576585‑3576736‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACCTGGTGAAGCTGGTAATCCCATTATTTGC < NC_000913/3576763‑3576616 CACCAGAAATGCCGCCGCTGCCGCCACGCCTGCAAATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCA < 1:364336/149‑1 ACCAGAAATGCCGCCGCTGCCGCCACGCCTGCAAATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAG < 1:261614/149‑1 CGCCGCTGCCGCCACGCCTGCAAATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATT > 2:665494/1‑149 GCCACGCCTGCAAATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGG > 2:694083/1‑149 ATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTG < 1:694083/149‑1 tacTGGGATTACCAGCTTCACCAGGTTCGTCCCGGGGTGGCGCGCCATTGAGAACGCACCGCTAATCAGCAGAACTACCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGG < 1:7538/146‑1 AATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGT > 1:13184/1‑149 ATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGT > 1:1417685/1‑148 ATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGT < 2:1417685/148‑1 GGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGT < 1:665494/149‑1 GGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGT < 2:13184/149‑1 GGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGT < 2:664508/149‑1 ATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGC < 2:401219/149‑1 GCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACCTGGTGAAGCTGGTAATCCCATTATTT < 2:353786/149‑1 CCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTCCGAACCTGGTGAAGCTGGTAATCCCATTATTTG > 1:417585/1‑149 CCGCGCGCATTATGCCATAGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTATGCTGATTATCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACATGGTGAAGCTGGTAATCACATTATTTG > 1:1398646/1‑149 CGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACCTGGTGAAGCTGGTAATCCCATTATTTGC < 1:138219/149‑1 CACCAGAAATGCCGCCGCTGCCGCCACGCCTGCAAATAATGGGATTACCAGCTTCACCAGGTTCGTACCGGTGTGGCGCGCCATTGAGAAAGCAACGCTAATCAGCAGAACTATCGCCACTTCAAAGAACAGCGGTAGCGCACAGACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3576585‑3576736‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACCTGGTGAAGCTGGTAATCCCATTATTTGC < NC_000913/3576763‑3576616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |