New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 398661466 (1.360)4 (0.090) 4/268 6.7 6.2% noncoding (183/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
?NC_000913_3_pae_tpiA = 3986622 60 (1.340)noncoding (191/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTC  >  NC_000913_3_pae_tpiA/3986481‑3986769
                                                                                                                                             |                                                                                                                                                   
cGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGAAgg                                                                                                                                              >  1:306448/1‑149 (MQ=255)
  gAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCg                                                                                                                                            >  1:95144/1‑149 (MQ=255)
    aTGACGAAGGGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGtt                                                                                                                                          <  1:695377/149‑1 (MQ=255)
         gCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCAACAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTATTGTCATACATACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGatctttt                                                                                                                                     >  1:555789/1‑149 (MQ=255)
           agagCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTAt                                                                                                                                   <  1:39433/149‑1 (MQ=255)
            gagCCGTTTACGGTGCTTATCGTCCACTATGAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATg                                                                                                                                  >  2:610773/1‑149 (MQ=255)
               ccGTTTACGGTGCTTATCGTCCACTGCCAGATGTCGCTTATGCCTCATGAGAAACCATGCATACATCATTGCGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGATTTTTTGTCTAt                                                                                                                               >  2:96632/1‑149 (MQ=255)
               ccGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTAt                                                                                                                               <  1:357069/149‑1 (MQ=255)
               ccGTTTACGGTGCTTATCGTCAACGTACACATGTTGCTTATACCCCATAAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTGTTACGCCTGCCCCGTAATAAGAGCAGGCCTTTTTTTATGTAt                                                                                                                               <  2:748718/149‑1 (MQ=255)
                 gTTTAGGGTGCTTATCGTCCACTGACAGATGTCGATTATGCTTCATCAGACACCAGGGACACAACGTTGAGTGAAGCACCCACTTGTTGTAATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCa                                                                                                                             <  2:793561/149‑1 (MQ=255)
                     aCGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGaa                                                                                                                         <  1:639465/149‑1 (MQ=255)
                       ggTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGGAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAgt                                                                                                                       >  1:249011/1‑148 (MQ=255)
                        gTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAgca                                                                                                                      >  2:412033/1‑147 (MQ=255)
                          gCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGccc                                                                                                                    <  1:296617/149‑1 (MQ=255)
                               tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCCCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                               >  2:488044/1‑149 (MQ=255)
                               tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATTTATCTGTAGCGCCCCGGAg                                                                                                               >  2:686246/1‑149 (MQ=255)
                               tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                               >  1:64607/1‑149 (MQ=255)
                               tCGTCCACTGACAGACGTCGCTTATGCCTCAGCAGACACCATGGACACATCGTTGAGTAAAGCACCCACTTGTTGTCATACAGACCTTTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                               <  1:195450/149‑1 (MQ=255)
                                cGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAgg                                                                                                              <  1:190351/149‑1 (MQ=255)
                                cGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAgg                                                                                                              <  1:117167/149‑1 (MQ=255)
                                cGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGAATGGATTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAgg                                                                                                              >  1:835874/1‑149 (MQ=255)
                                     aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCtt                                                                                                         <  1:484998/149‑1 (MQ=255)
                                     aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCtt                                                                                                         <  1:316360/149‑1 (MQ=255)
                                      cTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTg                                                                                                        >  1:473433/1‑149 (MQ=255)
                                          cAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                               <  2:779968/138‑1 (MQ=255)
                                          cAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                               >  1:779968/1‑138 (MQ=255)
                                            gATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATACGAGCAGGCGGTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCg                                                                                                  >  1:22065/1‑149 (MQ=255)
                                              tGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCggg                                                                                                >  2:30355/1‑149 (MQ=255)
                                               gTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCgggg                                                                                               >  1:34536/1‑148 (MQ=255)
                                               gTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTGTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGt                                                                                               >  2:633073/1‑149 (MQ=255)
                                                tCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCGTGCCTCCGGGTg                                                                                              >  1:218715/1‑149 (MQ=255)
                                                   cTTATGCCTCATCTGACGCCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTgaga                                                                                           <  1:827920/149‑1 (MQ=255)
                                                    ttATGCCTCATCAGACACCATGGACACAACGTTGAGAGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGGGCAGGCGTTTTTTTATGTATCAGGCAGGCCCCGGAGATTCTTTCCTACGGGAGAGaa                                                                                          >  1:333253/1‑149 (MQ=255)
                                                    gtATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTCGTCATACAGACCTGTTTTAACGCCTGCTCCGTAAAAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGaa                                                                                          <  2:763219/148‑1 (MQ=255)
                                                      aTGCCTCATCAGACACCATGGACAAAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGACACAAGAGCAGGCGTTTTTTTATGTATCAGTAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAgg                                                                                        <  1:800031/149‑1 (MQ=255)
                                                         ccTCATCAGACACCATGGACACAACGTTGGGTGAAGCACCCCCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGACGTGCTTGCCTCCGGGTGAgaacgaac                                                                                     >  2:220399/1‑149 (MQ=255)
                                                          cTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAact                                                                                    >  1:726996/1‑149 (MQ=255)
                                                            cagcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAactac                                                                                  <  1:574793/146‑1 (MQ=255)
                                                             atcaGACACCATGGACACAACGTTGAGAGAAGACCCCACTTGTTATCATACAGACCTCTTTTAACTCCTGCTCCGTAATAAGAGCACGCGTTTTTTTATCTATAAGGAAACACCCGGCGGTGATTGCCTCCGGATGCGAAGCAactact                                                                                 >  2:265643/1‑149 (MQ=255)
                                                              tcaGACACCATGGACACAACGTTGAGTGACGCACCCACATGTTGACATACAGACATGGTTTCACGCCTGCGCCGTAATAAGAGCAGGCGTTTTTTTATGTGTCGGGAAGGCCCCGGAGGTGCTTGGCTCCGGGTGAGAAGGagcgcctg                                                                                >  1:718975/1‑142 (MQ=255)
                                                                   cacCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTTCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCg                                                                           <  1:757032/149‑1 (MQ=255)
                                                                    acCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCgg                                                                          <  1:650932/149‑1 (MQ=255)
                                                                    acCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCGCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCgg                                                                          <  1:392880/149‑1 (MQ=255)
                                                                       aTGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGtt                                                                       >  2:800378/1‑149 (MQ=255)
                                                                        tGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTa                                                                      <  2:443337/149‑1 (MQ=255)
                                                                               aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAACGAACTACTGTGGCGGGTTATTCTGCa                                                               >  1:383256/1‑149 (MQ=255)
                                                                                  gTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGCGAAGGAACTACTGTGGCGGGTTATTCTGCACCg                                                            >  1:304854/1‑149 (MQ=255)
                                                                                  gTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGGGGGAAGGAACTACTGTGGCGGGTTATTCTGCAACg                                                            >  1:34982/1‑149 (MQ=255)
                                                                                  gTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATAAGGAGAAGCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACGGTGGCGGGTTATTCTGCAACg                                                            >  1:836141/1‑149 (MQ=255)
                                                                                   ttGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGt                                                           <  1:30355/149‑1 (MQ=255)
                                                                                   tgcaGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGt                                                           <  2:275230/146‑1 (MQ=255)
                                                                                       gTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAAc                                                       <  2:473433/149‑1 (MQ=255)
                                                                                        tGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACa                                                      >  2:759590/1‑149 (MQ=255)
                                                                                             cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaaa                                                 <  1:800378/149‑1 (MQ=255)
                                                                                             cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGACTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaaa                                                 <  1:242551/149‑1 (MQ=255)
                                                                                                ccACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGCGAGAAGGAACTACTGTGGCGGGTTATTCTGCCACGCTAACACCAAACCg                                              >  1:89569/1‑149 (MQ=255)
                                                                                                               cAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCt                               <  1:353073/149‑1 (MQ=255)
                                                                                                                aGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTg                              >  1:502738/1‑149 (MQ=255)
                                                                                                                       ttttAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttc                       >  2:307989/1‑149 (MQ=255)
                                                                                                                                cTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGCCGCATAGCTGCAGCTTCTTCCGGCtt              >  1:99887/1‑149 (MQ=255)
                                                                                                                                     ccGTAATAAGAGCAGGCGTTTTTTTATGTATCAGTAAGGCCGCGGGGGTGCTTGCCCCCGGGTGGGAAGGAACTAGTGTGGTGGGTTGTTCTGCAACGTTCACATCAAACCGACGCGCCTCGTAGCGGCAACTTCTTCCGGCTCTTGCa         >  2:37694/1‑149 (MQ=255)
                                                                                                                                      cGTAATAAGAGCAGGCGTTTTTTTATTTATCAGTAAGGCCCCGGAGATGCTAGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTTGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAg        <  2:260893/149‑1 (MQ=255)
                                                                                                                                            aaGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTc  >  1:351456/1‑149 (MQ=255)
                                                                                                                                             |                                                                                                                                                   
CGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTC  >  NC_000913_3_pae_tpiA/3986481‑3986769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.