| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | 1978503 = | NA (NA) | 156 (0.980) | 108/254 | 0.2 | 94.5% | intergenic (‑306/+15) | flhD/insB1 | flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B |
| ? | NC_000913_3_pae_tpiA | = 2490627 | 9 (0.060) | coding (1324/1695 nt) | oxc | oxalyl CoA decarboxylase, ThDP‑dependent | |||||
Only 100 of 309 total aligned reads displayed.
GGTGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCACCTTCATTAA > NC_000913_3_pae_tpiA/2490479‑2490776 | gctgatgtccggcggtgcctttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACa > 1:1162153‑M2/140‑150 (MQ=255) ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACaa > 1:32693‑M2/139‑150 (MQ=255) tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAAc > 3:175821‑M2/138‑150 (MQ=255) tGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggt < 1:450786‑M2/150‑4 (MQ=255) gCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggta < 2:1102570‑M2/150‑5 (MQ=255) gCACCAGCGCCACTGAGATCAACACCGTCTCCTCCGTAGATGCCGCCATTATTATAAATAACGATCGGCACCGGCTGGGTATACCGACCAATCGATACAATATCCACCCCACTGAAACCAAAAGCACTATCACCTTCAATGTCGACgttc < 4:430995‑M2/150‑5 (MQ=255) aCCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTCTCACCTTCAATGGCGACggtaat > 4:162758‑M2/1‑144 (MQ=255) cAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAAACGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatga < 2:583270‑M2/150‑9 (MQ=255) cACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaa < 1:1021471‑M2/150‑15 (MQ=255) tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGaa < 1:1645151‑M2/26‑1 (MQ=255) cTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaact < 2:1225779‑M2/150‑17 (MQ=255) gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGc < 2:32693‑M2/33‑1 (MQ=255) cAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaa < 3:941511‑M2/132‑6 (MQ=255) acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCAc < 4:175821‑M2/39‑1 (MQ=255) tctcCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCTTCCCACTGAAACCAAATGCACTATTACCTTCAATGGCGACggtaatgactccaacttattgatagtgtttt > 4:1164445‑M2/1‑119 (MQ=255) tctcCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgtttt > 1:643513‑M2/1‑119 (MQ=255) gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGa < 4:210539‑M2/25‑1 (MQ=255) caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGa < 3:587847‑M2/42‑1 (MQ=255) ctctGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttatt > 2:1162807‑M2/1‑115 (MQ=255) caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATgg > 3:497487‑M2/106‑150 (MQ=255) tGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatcgtgtttt > 2:1902477‑M2/1‑112 (MQ=255) tAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcaga > 4:862972‑M2/1‑110 (MQ=255) aTGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaat < 2:1793921‑M2/113‑7 (MQ=255) tGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatga < 3:1103244‑M2/114‑9 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCAt > 2:1445942‑M2/96‑150 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATa > 1:413376‑M2/95‑150 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATa > 2:1334933‑M2/95‑150 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATAcc > 1:1505757‑M2/93‑150 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCg > 2:555735‑M2/92‑150 (MQ=255) ccATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccg < 2:758587‑M2/150‑50 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAg < 4:311749‑M2/50‑1 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactagagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGa > 2:1247214‑M2/91‑150 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGc < 1:942927‑M2/33‑1 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATg < 2:1820‑M2/62‑1 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGc < 4:107970‑M2/63‑1 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGc < 4:497487‑M2/63‑1 (MQ=255) ttaAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact < 2:152083‑M2/150‑56 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacacaatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGccc > 3:861050‑M2/86‑150 (MQ=255) taAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt < 3:921841‑M2/150‑57 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAg > 4:1177527‑M2/84‑107 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCAc > 3:715984‑M2/84‑114 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCAc < 4:715984‑M2/31‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATa < 1:974781‑M2/56‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATa > 2:974781‑M2/81‑136 (MQ=255) aaTAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 4:659502‑M2/1‑90 (MQ=255) aCGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc > 1:1225779‑M2/1‑86 (MQ=255) gATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag < 1:206676‑M2/150‑67 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGaa > 2:841138‑M2/70‑95 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTAcc > 1:1361567‑M2/69‑150 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGAc > 4:621474‑M2/68‑77 (MQ=255) cGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagacaatgcccgatgactttgtcatgcagct < 1:74649‑M2/143‑69 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACaa < 4:747270‑M2/86‑1 (MQ=255) cAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt < 1:1755778‑M2/150‑79 (MQ=255) aGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt > 3:670292‑M2/1‑71 (MQ=255) ggTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg > 3:899742‑M2/1‑70 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCGCGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAg > 1:181466‑M2/60‑150 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAg < 3:623469‑M2/91‑1 (MQ=255) ttATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg > 2:209773‑M2/1‑68 (MQ=255) ccactggagcacctcaaaaacaccatcatacacnaaatcagtaagttggcagcatcacCAATGGCNACAACCGGAGCACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGNTACNACAATCCAga > 1:1259327‑M2/59‑150 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAgac < 1:1883374‑M2/93‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACAcc < 2:174171‑M2/73‑1 (MQ=255) tCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 3:113102‑M2/1‑63 (MQ=255) tgcacctcaaaaacaccgtcatacactaaatcaggaagttcgcagcatcacCAGTGCCGACAACCTGAGTACCAGAATTCACGCTAGCACCGATGGCATAGGCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAgacgacgac < 1:1432054‑M2/99‑1 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAgg > 3:608376‑M2/52‑129 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAgacgacgac < 2:429403‑M2/99‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAt < 1:1583960‑M2/67‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGt < 4:601521‑M2/104‑1 (MQ=255) aTCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt > 2:483206‑M2/1‑56 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTta < 4:812861‑M2/107‑1 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTtata < 2:1123754‑M2/109‑1 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATAc < 1:161049‑M2/110‑1 (MQ=255) tttCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca > 2:926547‑M2/1‑46 (MQ=255) catcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATc > 3:1154637‑M2/36‑150 (MQ=255) tcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCaa < 2:413376‑M2/117‑1 (MQ=255) ccACTGAAACCAACAGCACTACCACCTTCAATGGCGACggtcatgaccccaactcattgatagtgttttacgttcagataatccccgatgactttgtcatgcagctccaccgattttgagaacgacagccacttccgtcccagccctgcc < 2:1386423‑M2/150‑113 (MQ=255) actaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAatat > 1:1326952‑M2/28‑150 (MQ=255) taaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGcc < 2:1555562‑M2/64‑1 (MQ=255) aaaCCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc > 4:899174‑M2/1‑32 (MQ=255) ccAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc > 2:1626105‑M2/1‑29 (MQ=255) gtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCAt > 3:641608‑M2/19‑150 (MQ=255) taagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGt > 1:1703356‑M2/18‑96 (MQ=255) taagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGt < 2:1703356‑M2/79‑1 (MQ=255) aaGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca < 3:1049751‑M2/150‑126 (MQ=255) gttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATc > 1:79310‑M2/15‑150 (MQ=255) cagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAggg > 4:1056188‑M2/10‑150 (MQ=255) aTCTCCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggttctgcctcagattcag > 3:430995‑M2/1‑18 (MQ=255) aTCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacctattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 1:1102570‑M2/1‑18 (MQ=255) cTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttat < 1:254021‑M2/150‑138 (MQ=255) acCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGa < 1:888321‑M2/69‑1 (MQ=255) acCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTtat < 3:1169452‑M2/108‑1 (MQ=255) tCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa > 3:211773‑M2/1‑11 (MQ=255) CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAgg < 3:790310‑M2/78‑1 (MQ=255) CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAgg > 4:790310‑M2/1‑78 (MQ=255) CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAc < 4:633533‑M2/150‑1 (MQ=255) CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAc > 4:556768‑M2/1‑150 (MQ=255) aTGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGt < 4:1118696/126‑1 (MQ=255) gACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg > 3:131922‑M2/1‑3 (MQ=255) gACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAgac > 3:346305/1‑86 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattc > 1:1805156‑M2/1‑1 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattc < 1:1543526‑M2/150‑150 (MQ=255) | GGTGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCACCTTCATTAA > NC_000913_3_pae_tpiA/2490479‑2490776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |