| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | 1978503 = | NA (NA) | 122 (0.940) | 85/256 | 0.6 | 95.3% | intergenic (‑306/+15) | flhD/insB1 | flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B |
| ? | NC_000913_3_pae_tpiA | = 2490627 | 6 (0.050) | coding (1324/1695 nt) | oxc | oxalyl CoA decarboxylase, ThDP‑dependent | |||||
Only 100 of 231 total aligned reads displayed.
TGGTGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCACCTTCATTAA > NC_000913_3_pae_tpiA/2490478‑2490776 | tGGTGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGAc < 2:654367/150‑1 (MQ=255)cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGAc > 4:604353‑M2/141‑150 (MQ=255)cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGAc < 2:1523416‑M2/10‑1 (MQ=255) gTGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTTACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACgg < 1:959450‑M2/150‑3 (MQ=255) cACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaa > 4:765258‑M2/1‑145 (MQ=255) cAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatga > 2:1037746‑M2/1‑142 (MQ=255) cACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGAc > 1:440904/1‑136 (MQ=255) cACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaa < 2:250205‑M2/150‑15 (MQ=255) tCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattga > 1:250205‑M2/1‑128 (MQ=255) gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGc < 4:200757‑M2/33‑1 (MQ=255) cAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaat > 1:411980‑M2/1‑127 (MQ=255) acacCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaactta < 1:1508193‑M2/143‑19 (MQ=255) cacCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagt < 3:543498‑M2/150‑27 (MQ=255) cacCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagt > 2:423527‑M2/1‑124 (MQ=255) ccGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgt > 2:1429792‑M2/1‑122 (MQ=255) ctctGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgtttt < 2:37361‑M2/146‑32 (MQ=255) ctGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttc < 1:140719‑M2/150‑38 (MQ=255) tGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaac < 1:468537‑M2/127‑16 (MQ=255) cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCAt > 2:511892‑M2/103‑150 (MQ=255) ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAg > 1:1264221‑M2/101‑150 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGc < 4:291765‑M2/51‑1 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggtagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGccc < 2:1307602‑M2/53‑1 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTa > 1:1316388‑M2/96‑130 (MQ=255) gccgccATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatg > 1:266789‑M2/1‑105 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATAcc > 4:801596‑M2/93‑150 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAt > 2:670232‑M2/91‑133 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCgg < 1:952119‑M2/16‑1 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCAc < 4:711391‑M2/39‑1 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCAc > 3:711391‑M2/89‑127 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGc > 4:103741‑M2/88‑150 (MQ=255) ttaAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact < 4:337770‑M2/150‑56 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGccc < 3:604353‑M2/65‑1 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGga > 4:89748‑M2/84‑100 (MQ=255) aaaaaTAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 4:89174‑M2/1‑93 (MQ=255) aaTAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 2:786536‑M2/1‑90 (MQ=255) aaTAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 2:1347607‑M2/1‑90 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGaca > 1:1499073‑M2/80‑150 (MQ=255) gATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag > 1:58525‑M2/1‑84 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCAc < 3:298935‑M2/31‑1 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTAc > 4:258309‑M2/70‑150 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTAc < 2:730960‑M2/81‑1 (MQ=255) cGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttc > 1:292815‑M2/1‑75 (MQ=255) cGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttc < 2:292815‑M2/112‑38 (MQ=255) cGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttat > 4:363510‑M2/1‑75 (MQ=255) cGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttat < 3:363510‑M2/94‑20 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAATCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACGATc > 2:1263720‑M2/63‑150 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATc < 4:474786‑M2/88‑1 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATc < 3:10196‑M2/88‑1 (MQ=255) tatCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg > 2:1276855‑M2/1‑65 (MQ=255) tatCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg < 1:1276855‑M2/145‑81 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCAc > 1:1421349‑M2/53‑91 (MQ=255) gACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct > 3:773422‑M2/1‑61 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGt > 1:191878‑M2/50‑150 (MQ=255) cAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca > 4:506167‑M2/1‑59 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAt > 1:1376275‑M2/47‑89 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGtt > 1:863771‑M2/46‑150 (MQ=255) tCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag > 3:466923‑M2/1‑55 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTta < 2:118795‑M2/107‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTta < 3:89828‑M2/107‑1 (MQ=255) tttCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt > 2:1503016‑M2/1‑52 (MQ=255) aTTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttc < 1:905396‑M2/84‑38 (MQ=255) aTTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttc > 2:905396‑M2/1‑47 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAt < 3:278327‑M2/67‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATc > 1:1049263‑M2/36‑150 (MQ=255) catcatacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATc > 1:648150‑M2/36‑150 (MQ=255) atacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAg > 4:532323‑M2/32‑81 (MQ=255) atacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGcc > 3:165942‑M2/32‑95 (MQ=255) tacactaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACAcccc > 2:41186‑M2/31‑105 (MQ=255) tCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt < 3:796203‑M2/119‑80 (MQ=255) tCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 1:112302‑M2/1‑40 (MQ=255) actaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAatat > 2:1323890‑M2/28‑150 (MQ=255) ctaaatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGc > 3:51024‑M2/27‑59 (MQ=255) aCTGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttc < 2:1076388‑M2/73‑38 (MQ=255) tGAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg < 2:473951‑M2/133‑100 (MQ=255) agatcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTc < 4:327997‑M2/126‑1 (MQ=255) gAAACCAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt > 2:692609‑M2/1‑33 (MQ=255) tcagtaagttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCAGAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTg < 2:113657‑M2/129‑1 (MQ=255) cAAAAGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg < 1:400750‑M2/120‑93 (MQ=255) aaaaGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca > 2:87009‑M2/1‑27 (MQ=255) aaaGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc < 2:1118988‑M2/150‑125 (MQ=255) aaaGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 2:225484‑M2/90‑65 (MQ=255) aaGCACTATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca > 1:718263‑M2/1‑25 (MQ=255) gttggcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATc > 2:1130699‑M2/15‑150 (MQ=255) gcagcatcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAgg > 1:972299‑M2/11‑150 (MQ=255) tATCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga < 1:767742‑M2/72‑54 (MQ=255) aTCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 3:337770‑M2/1‑18 (MQ=255) aTCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 4:304170‑M2/1‑18 (MQ=255) aTCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 2:140719‑M2/1‑18 (MQ=255) aTCACCTTCAATGGCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 2:959450‑M2/1‑18 (MQ=255) tcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTAttt > 1:1136699‑M2/5‑150 (MQ=255) tcacCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTAttt > 1:544795‑M2/5‑150 (MQ=255) tCAATGGCGACggtaatgcctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc > 4:789103‑M2/1‑11 (MQ=255) CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAc > 3:566017‑M2/1‑150 (MQ=255) aTGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTAc > 4:847239/1‑79 (MQ=255) ggCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTc > 2:458238/1‑122 (MQ=255) gCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac > 3:12248‑M2/1‑5 (MQ=255) gCGACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac < 4:12248‑M2/77‑73 (MQ=255) cGACggtaatgactccaacttattgatcgtgtagttagtgcagataacgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaa > 1:1088201‑M2/1‑4 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattc > 4:670850‑M2/1‑1 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattc > 2:1094721‑M2/1‑1 (MQ=255) | TGGTGCACCAGCGCCACTGAGATCAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCACCTTCATTAA > NC_000913_3_pae_tpiA/2490478‑2490776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |