New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	4049740 =	62 (2.200)	4 (0.150)	4/272	3.4	6.9%	coding (2775/2787 nt)	polA	5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease
	?	NC_000913_3_pae_tpiA	4049764 =	49 (1.830)					intergenic (+12/‑135)	polA/spf	5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATCATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAG  >  NC_000913_3_pae_tpiA/4049593‑4049883                                                                                                                                                    |                                                                                                                                                gATCATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATc                                                                                                                                                >  2:76302/1‑149 (MQ=255)  aTCATTCAGGTACACGAGGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCa                                                                                                                                               <  1:276837/149‑1 (MQ=255)  aTCATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCa                                                                                                                                               >  2:217715/1‑149 (MQ=255)    cATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAgg                                                                                                                                             <  2:390296/149‑1 (MQ=255)     aTGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGCAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTTCTGGAGGAAGTGGGGAGTGGCGAAAACTGGGATCAGgc                                                                                                                                            >  1:158799/1‑149 (MQ=255)             acacGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAg                                                                                                                                    >  1:175193/1‑149 (MQ=255)               acGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTAGCGGGTGGAAGGGGGGGGTGGCGGAAACTGGGGTCAGGCGCACTAAGAt                                                                                                                                  >  1:12620/1‑149 (MQ=255)                 gATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGAtta                                                                                                                                <  2:133070/149‑2 (MQ=255)                 gATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTc                                                                                                                                >  2:330710/1‑149 (MQ=255)                 gATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTc                                                                                                                                >  2:42636/1‑149 (MQ=255)                   tGAACTGGCATTTGAAGTTCATAAAGATGATGTTGATGCCGTCTCGACGCAGATTCATCAACGGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGc                                                                                                                              <  1:174397/149‑1 (MQ=255)                     aaCTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCt                                                                                                                            <  1:330710/149‑1 (MQ=255)                       cTGGTATTTGGAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCAAAAACTGGGATCAGGCGCAGTAAGATTCGCCAGa                                                                                                                          >  1:484787/1‑149 (MQ=255)                        tGGTATTTGAAGTTCATAAAAATGATGTTGATGCCGTCGAGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGAAAGTGGGAAGAGGCGAAACCTAGGATCAGGCGCACTAAGATTCGCCTGaa                                                                                                                         >  2:183759/1‑149 (MQ=255)                          gTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCATGAACa                                                                                                                       >  1:212428/1‑149 (MQ=255)                                  aGTTCATAAAGATGATTTTGATGCCGTCGCGAAGCAGATTCATTAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCtttt                                                                                                               <  1:44937/149‑1 (MQ=255)                                  aGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCtttt                                                                                                               <  2:406945/149‑1 (MQ=255)                                   gTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTCCCCGTCTGTATGTGCCGTTGCTGGTGGAGGTGGGGAGTGCCGAAAACTGGGATAAGTCGCACTCAGCTTCGCCTGAACATGGCttttt                                                                                                              >  2:340138/1‑149 (MQ=255)                                   gTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCttttt                                                                                                              <  1:62287/149‑1 (MQ=255)                                    ttCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAAATGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCtttttt                                                                                                             >  2:137767/1‑149 (MQ=255)                                     tCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGATATCTGGGGTCTGGGGCACTAAGATTCGCCTGAACATGCCTTTTTTc                                                                                                            <  1:75754/149‑1 (MQ=255)                                       aTAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGACTGGATGAGCCGATGCTGGAGGAAGTGGGGACTGGCGAAAACTGGAATACCGCGCCCTAAAATTCGCCTTACCATACCGTGTTTctt                                                                                                          >  2:346827/1‑147 (MQ=255)                                        tAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTATACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCgta                                                                                                         >  1:329839/1‑149 (MQ=255)                                           aGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCgtaagt                                                                                                      >  1:356887/1‑149 (MQ=255)                                              tgatgTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGtaagtaag                                                                                                   >  2:283698/1‑149 (MQ=255)                                               gatgTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTc                                                                                                            >  1:40430/1‑139 (MQ=255)                                               gatgTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTc                                                                                                            <  2:40430/139‑1 (MQ=255)                                                           gTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCGTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGt                                                                                      >  2:406748/1‑149 (MQ=255)                                                            tCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATACGCTGTc                                                                                     >  1:53243/1‑149 (MQ=255)                                                            tCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCGGCATGGGCCGATGCTGGTGAGTTTTGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTc                                                                                     >  2:477832/1‑149 (MQ=255)                                                              gcgAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTGAc                                                                                   >  1:19542/1‑149 (MQ=255)                                                                gAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTGAGCAACATAAGCTGTCACGt                                                                                 >  1:186046/1‑149 (MQ=255)                                                                gAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGt                                                                                 >  1:75163/1‑149 (MQ=255)                                                                  aGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTTACGttt                                                                               >  1:403148/1‑149 (MQ=255)                                                                  aGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGttt                                                                               <  1:76302/149‑1 (MQ=255)                                                                   gCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGtttt                                                                              <  1:42636/149‑1 (MQ=255)                                                                    cAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCGGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTtg                                                                             >  2:57876/1‑149 (MQ=255)                                                                       aTTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGa                                                                          >  2:37422/1‑149 (MQ=255)                                                                         tcatcaACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATg                                                                        <  2:152905/149‑1 (MQ=255)                                                                                cTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGGGATAGCTATTa                                                                 >  1:428853/1‑149 (MQ=255)                                                                                 tGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAg                                                                >  2:37979/1‑149 (MQ=255)                                                                                   aTGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGaa                                                              >  2:208140/1‑149 (MQ=255)                                                                                    tGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCGATTCGaga                                                             >  2:67812/1‑147 (MQ=255)                                                                                          aCTGTACCCGTCTGGATTTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTa                                                       <  2:10542/149‑1 (MQ=255)                                                                                            tGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATg                                                     >  1:15991/1‑149 (MQ=255)                                                                                                 ccGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGgc                                                                                                                                            >  1:61502/1‑57 (MQ=255)                                                                                                 ccGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGgc                                                                                                                                            <  2:61502/57‑1 (MQ=255)                                                                                                  cGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGcaacaa                                               <  2:403148/149‑1 (MQ=255)                                                                                                      tGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAACTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCCACAACTGa                                           >  2:158339/1‑149 (MQ=255)                                                                                                         aTGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGaaaa                                        <  1:37422/149‑1 (MQ=255)                                                                                                              ccGTTGCTGGGGGAAGTGGGCAGTGGCGAAAACTGGGAACAAAACAACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAAt                                   <  1:363686/149‑1 (MQ=255)                                                                                                                    cTGGTGGAAGGGGAGAGTGGCAAAAACTGGGATCAGGCGCACAAAGATACGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACaaa                             <  2:19542/149‑1 (MQ=255)                                                                                                                      ggtggAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACaaaaa                           <  1:400633/149‑1 (MQ=255)                                                                                                                       gtggAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAGTTAAGCAACATAAGCGGTCAGGTTTTGTGATGGCTTTTAGAAATTCCTATGCAAAAACTAAGAAAAAGTTACAAAAAg                          >  1:105000/1‑149 (MQ=255)                                                                                                                                          aaaaCTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTAtt                                                                  <  1:274410/90‑1 (MQ=255)                                                                                                                                          aaaaCTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTAtt                                                                  >  2:274410/1‑90 (MQ=255)                                                                                                                                            aaCTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACaaaa     <  2:356887/149‑1 (MQ=255)                                                                                                                                              cgaggACCAGACTCAATAAGATTCGCCTCAACAAACTTTAAATAATAAATTAGCAACATAAGTTGTCACGTTTTGCGATCGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACaaaaaa   <  2:476892/146‑1 (MQ=255)                                                                                                                                              cTGGTAGCAGGCGAACTACGGTTCGGCTGAATATGCATTTTTTCGTAAGTAAGCAACATAAGCTGTCTCGTTTTGTGATGGCGATTACAAATTCCTACGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACaaaaaa   <  2:40932/149‑1 (MQ=255)                                                                                                                                               tGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAACAAATTAAAAAAAGTGCTTTCTGAACTGGACACAAAag  >  2:32922/1‑149 (MQ=255)                                                                                                                                               tGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAag  >  1:34244/1‑149 (MQ=255)                                                                                                                                               tGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAag  <  1:283698/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                GATCATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAAGATTCGCCTGAACATGCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAG  >  NC_000913_3_pae_tpiA/4049593‑4049883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.