New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	4122239 =	55 (1.060)	3 (0.060)	3/256	NT	5.5%	intergenic (‑36/+57)	hslV/ftsN	peptidase component of the HslUV protease/essential cell division protein
	?	NC_000913_3_pae_tpiA	4122259 =	52 (1.060)					intergenic (‑56/+37)	hslV/ftsN	peptidase component of the HslUV protease/essential cell division protein

AGACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCA  >  NC_000913_3_pae_tpiA/4122091‑4122384                                                                                                                                                     |                                                                                                                                                  aatcgtgtggtcattggcccggtgaaaggcaaagagaacgcagacagcaccctcaatcggttgaagatggcgggtcatacaaactgccttcggctcgccgccggggggtgaaaccctcaaaatcccccccgtctatactttcagtatgc                                                                                                                                                   <  2:466175‑M1/1‑1 (MQ=255)  accgtgtggtcgttggcccggtgaaaggcaaagagaacgcagacagcacccgcaatcggttgaagatggcggggcatacaaactgcattcggctcgccgccgggggttgaaaccctcaaaatcccccccatctataattgcattatgcc                                                                                                                                                  >  1:892431‑M1/148‑149 (MQ=255)    cggcggACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAAcccc                                                                                                                                                <  1:905512/149‑1 (MQ=255)         gACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGCACAAACCACGTACa                                                                                                                                           >  2:685487/1‑149 (MQ=255)           ccTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGAACCCTTGGTTACGAATCCAGAGTACAAACCCCGTACaaa                                                                                                                                         >  2:131090/1‑149 (MQ=255)            ttttttCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACaaaa                                                                                                                                        <  2:13670/148‑1 (MQ=255)             tttttCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAACGATGACCACATGACCGTTACGGCGTACGCTTACTATAGTTATCAATAGCGGACGTCTTGGTTACGAATACAGAGTACAAACCCCGTACATAAg                                                                                                                                       >  1:313264/1‑149 (MQ=255)                 tCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGAAAACTTCATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACg                                                                                                                                   <  1:460038/149‑1 (MQ=255)                 tCACGTTGCCTTTCATTACGGTATTGCCAAAAGTGTCATGAACTTCATCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACg                                                                                                                                   <  1:502078/149‑1 (MQ=255)                   ccggtgaaaggcaaagagaacgcagacagcaccctcaatcggttgaagatggcgggtcatacaaactgcattcggctcgccgccgggggttgaaaccctcaaaatcccccccatctataattgcattatgCCCCGTACAAAAGTACggg                                                                                                                                 >  2:340443‑M1/131‑149 (MQ=255)                     gTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGCGGc                                                                                                                               >  1:903151/1‑149 (MQ=255)                          cTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAAt                                                                                                                          >  2:69392/1‑149 (MQ=255)                             tCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCATTTGTTACGAATACAGAGTACACACCCCGTACAAAAGTACGGGGCATAATGCa                                                                                                                       <  1:517842/149‑1 (MQ=255)                                   cGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGCATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAGTtata                                                                                                                 >  2:109584/1‑149 (MQ=255)                                   cGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATtata                                                                                                                 <  2:871063/149‑1 (MQ=255)                                     gTATTGCCCAACGGACCCTGCCCATCACCAGCGATGACCACACGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGa                                                                                                               <  2:758121/149‑1 (MQ=255)                                       aTTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATCGacc                                                                                                             <  2:863707/149‑3 (MQ=255)                                                 gTGGCCTGACCATCACCAGCGATTACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGAttt                                                                                                   <  1:526827/149‑1 (MQ=255)                                                 gTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGAttt                                                                                                   <  1:526851/149‑1 (MQ=255)                                                     ccTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGTTTTGAg                                                                                               >  2:467755/1‑149 (MQ=255)                                                     ccTGACCATCACCAGCGATGACCAAATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGTCATAATGCAATTATAGATGGGGGGGATTTTGAg                                                                                               <  2:870511/149‑1 (MQ=255)                                                      cTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGGTAGGGAAGAttttagcg                                                                                              >  2:285876/1‑145 (MQ=255)                                                       tGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAggg                                                                                             <  2:831311/149‑1 (MQ=255)                                                       tGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAggg                                                                                             >  1:289580/1‑149 (MQ=255)                                                        gcccaccaccaGCGATGACCACATCGCCGTTACGGCGTACGCCTACTATAGGTGTCACGAGCTGACCCCTTGGTTACGAATCCAGAGTACAAACCCCGTACAACAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGt                                                                                            <  1:228296/147‑1 (MQ=255)                                                             tCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGAttt                                                                                                   >  2:860673/1‑137 (MQ=255)                                                             tCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGAttt                                                                                                   <  1:860673/137‑1 (MQ=255)                                                             tCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCaa                                                                                       >  1:760255/1‑149 (MQ=255)                                                                        gggtcatacaaactgcattcggctcgccgccgggggttgaaaccctcaaaatcccccccatctataattgcattatgCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAg                                                                                               <  1:157416‑M1/53‑1 (MQ=255)                                                                        gggtcatacaaactgcattcggctcgccgccgggggttgaaaccctcaaaatcccccccatctataattgcattatgCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAg                                                                                               >  2:157416‑M1/78‑130 (MQ=255)                                                                           cacaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCGGACCCCTTGGTTACGAATACAGGTTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGGTTTTGGAGGGCTCACCGCCcggcgcccag                                                                         >  1:338174/1‑144 (MQ=255)                                                                            acaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAACAGTACGGGGCATCATGCAATTATAGATGTGGGGGATTTTGATGGTTTCAACTCCCGGCGGCGAGc                                                                        <  2:560049/149‑1 (MQ=255)                                                                            acaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGCGGGTTTCAACCCCCGGCGGCGAGc                                                                        >  1:50788/1‑149 (MQ=255)                                                                              aTGGCCGTTAGGGCGTACGCGTACTATAGTTGTCACGAGCTGACGCCTTGGTTACGAATGCAGAGTAGAAACCACGTACAAAAGTACGGGGCATAGTGCAATTATAGATGGGGGGGATTTTGAGGGGTTCAACCCCCGGCGGCGAGCCg                                                                      >  2:718488/1‑149 (MQ=255)                                                                              aTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGAAGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCg                                                                      >  1:722426/1‑149 (MQ=255)                                                                                  cctgtatggCGTACTGTGACTATTGTTGGCACGAGTTGATCCCTTGGTTACGAATATAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATg                                                                  <  2:21943/142‑1 (MQ=255)                                                                                     ttACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATAGAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGAGATTTTGAGGGTTTCAACCACCGGCGGCGAGACGAATGCAg                                                               >  2:606075/1‑149 (MQ=255)                                                                                     ttACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTGAAACCACTGGCGGCGACACGGATGCac                                                               >  1:77526/1‑148 (MQ=255)                                                                                      tACGGCGTAAGCTTACTATAGTGGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACTGGGCATCATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGTCTGCGAGCCGAATGCAGt                                                              <  2:262531/149‑1 (MQ=255)                                                                                           cGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGGATGCAGTTTGTa                                                         >  1:763780/1‑149 (MQ=255)                                                                                                     cTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCa                                               <  2:867745/149‑1 (MQ=255)                                                                                                      tataGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTGTGAGGGTTTCAACCCCCGGCGGCGAGCCGATTGCAGTATGTATGACCCGCCAt                                              >  1:598715/1‑149 (MQ=255)                                                                                                      taaaGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGACATAATGCAATTATAGATGGGGGGGATTCTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCAt                                              <  2:515095/146‑1 (MQ=255)                                                                                                        tggTTGTCACGAGCTGACCCCGTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCt                                            <  1:93694/147‑1 (MQ=255)                                                                                                           ttGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCa                                         <  2:335882/149‑1 (MQ=255)                                                                                                             gTCACCAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAAc                                       <  2:931315/149‑1 (MQ=255)                                                                                                                  gAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGAtt                                  <  2:360234/149‑1 (MQ=255)                                                                                                                     cTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAg                               <  1:499806/149‑1 (MQ=255)                                                                                                                       gACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAggg                             <  1:188105/149‑1 (MQ=255)                                                                                                                           ccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGGGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATGGAGGCTggt                         >  1:388765/1‑147 (MQ=255)                                                                                                                           ccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCGGCCATCTTCAACGGATGGAGGGTGcg                         >  1:284203/1‑148 (MQ=255)                                                                                                                                 ttACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGc                   >  1:717080/1‑149 (MQ=255)                                                                                                                                 ttACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGc                   <  1:829074/149‑1 (MQ=255)                                                                                                                                    cGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATCGCGGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTCTCTGCGtt                <  1:680323/149‑1 (MQ=255)                                                                                                                                        tACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGCCCCGCCATCTTCAACCGATTGAGGGTGCTTTCTGCGTtctcg            >  1:85118/1‑148 (MQ=255)                                                                                                                                        tACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTctct            >  2:4776/1‑149 (MQ=255)                                                                                                                                           agagTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATCGACGGTGCGGTCTGCGTTCTCttgg         >  1:718959/1‑147 (MQ=255)                                                                                                                                             agTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGAGGCGAGGCGAATGCAGTTTGTATGACCCGACATCTTCAACCGATTGAGTGTGCTGTCTGCGTTCTCTTTGcc       >  2:175980/1‑149 (MQ=255)                                                                                                                                               tACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCtt     >  2:766700/1‑149 (MQ=255)                                                                                                                                               tACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCtt     >  1:353604/1‑149 (MQ=255)                                                                                                                                               tACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATATTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCATTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCtt     >  1:517872/1‑149 (MQ=255)                                                                                                                                                  aaaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCa  >  2:39009/1‑149 (MQ=255)                                                                                                                                                  aaaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCa  >  2:561395/1‑149 (MQ=255)                                                                                                                                                  aaaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCa  >  2:547067/1‑149 (MQ=255)                                                                                                                                                  aaaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGAATTTAAGTGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCa  >  1:32010/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  AGACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCA  >  NC_000913_3_pae_tpiA/4122091‑4122384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.