New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 1552071 =NA (NA)39 (0.310) 30/220 7.5 NA noncoding (1/97 nt) RIP120 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP120 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913_3_pae_tpiA 1552279 = NA (NA)noncoding (31/97 nt) RIP121 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP121 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

ACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCatga‑‑a‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_tpiA/1552226‑1552071
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACAT  >  NC_000913_3_pae_tpiA/1552279‑1552432
                                                                                                                                                                                                                                                                                                                        
ACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCA                                                                                                                                                                    >  2:674971/1‑150
 CAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCAT                                                                                                                                                                   >  4:448682/1‑150
     ATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGG                                                                                                                                                               <  2:1693042/150‑1
     ATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGG                                                                                                                                                               <  1:217104/150‑1
      TGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATACGGCGTTCACGCCGCATCCGGC                                                                                                                                                              >  2:1100647/1‑150
      TGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGC                                                                                                                                                              >  2:687994/1‑150
        AAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            >  1:1421437/1‑150
        AAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            >  1:548816/1‑150
        AAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            >  1:548807/1‑150
         tactgcCGCCTTTTACAGGGCCCTTTGACACTGATGACAAACGCCACCTTGCATGATGCGCTACGATTATCAAGCCTCAACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCGCGCCGCATCCGGCATG                                                                                                                                                           <  1:1314455/144‑1
          AATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA                                                                                                                                                          >  2:740513/1‑150
           ATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑A                                                                                                                                                       <  3:4893/150‑1
                           CGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATC                                                                                                                                                                  <  4:131178/125‑1
                           CGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATC                                                                                                                                                                  >  3:131178/1‑125
                                   GAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            >  2:1563353/1‑123
                                   GAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            <  1:1563353/123‑1
                                         GATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCG                                                                                                                                                                >  2:374356/1‑113
                                         GATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCG                                                                                                                                                                <  1:374356/113‑1
                                               AAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATG                                                                                                                                                           <  2:1534306/112‑1
                                               AAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATG                                                                                                                                                           >  1:1534306/1‑112
                                                  CGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCAT                                                                                                                                                                   >  4:45815/1‑101
                                                  CGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCAT                                                                                                                                                                   <  3:45815/101‑1
                                                               GATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AA                                                                                                                                                      <  2:322922/99‑1
                                                               GATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AA                                                                                                                                                      >  1:322922/1‑99
                                                                      TACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑A                                                                                                                                                       <  2:1550773/91‑1
                                                                      TACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑A                                                                                                                                                       >  1:1550773/1‑91
                                                                         GCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTC                                                                                                                                               <  2:795670/96‑1
                                                                         GCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTC                                                                                                                                               >  1:795670/1‑96
                                                                              TCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATG                                                                                                                                                           <  1:1728841/81‑1
                                                                              TCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATG                                                                                                                                                           >  2:1728841/1‑81
                                                                               CAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTT                                                                                   >  2:550754/1‑150
                                                                                    CTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTT                                                                              >  2:1168012/1‑150
                                                                                        ACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTC                                                                          <  1:550754/150‑1
                                                                                          GTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA                                                                                                                                                          >  1:878987/1‑70
                                                                                          GTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA                                                                                                                                                          <  2:878987/70‑1
                                                                                               CTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTT                                                                   <  1:1168012/150‑1
                                                                                                TGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTG                                                                                                                                >  1:1420233/1‑88
                                                                                                TGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTG                                                                                                                                <  2:1420233/88‑1
                                                                                                    ATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            >  2:34366/1‑58
                                                                                                    ATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAT                                                                                                                                                            <  1:34366/58‑1
                                                                                                                  AAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTTCAAATCCAATAGATTGCAGTGAA                                                                                                                         <  1:230425/79‑1
                                                                                                                  AAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTTCAAATCCAATAGATTGCAGTGAA                                                                                                                         >  2:230425/1‑79
                                                                                                                  AAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAA                                                 >  2:986454/1‑149
                                                                                                                  AAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAA                                                 <  1:986454/149‑1
                                                                                                                    GGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGC                                                                                                                >  1:394511/1‑84
                                                                                                                    GGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGC                                                                                                                <  2:394511/84‑1
                                                                                                                    GGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGT                                              >  3:772433/1‑150
                                                                                                                    GGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGT                                              >  2:1287788/1‑150
                                                                                                                        TTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCA                                          <  1:1287788/150‑1
                                                                                                                            ATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGT                                                                               >  1:222546/1‑109
                                                                                                                            ATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGT                                                                               <  2:222546/109‑1
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCCGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCGTTATAAAGTGCCATTTTT                                     >  3:558538/1‑150
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAG                                                                                                   >  1:1386582/1‑88
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAG                                                                                                   <  2:1386582/88‑1
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTT                                     >  1:846671/1‑150
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTT                                     >  3:784629/1‑150
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTT                                                                             <  2:144373/110‑1
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTT                                                                             >  1:144373/1‑110
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCA                                                                                                                                        <  1:1399706/51‑1
                                                                                                                             TGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCA                                                                                                                                        >  2:1399706/1‑51
                                                                                                                              GCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATC                                                                       <  4:678093/115‑1
                                                                                                                              GCCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATC                                                                       >  3:678093/1‑115
                                                                                                                               CCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTT                                   >  3:86452/1‑150
                                                                                                                               CCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCA                                                                                            >  1:101917/1‑93
                                                                                                                               CCGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCA                                                                                            <  2:101917/93‑1
                                                                                                                                CGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTA                                                                                                    >  3:640210/1‑84
                                                                                                                                CGGATAAGGCGTTCACGCCGCATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTA                                                                                                    <  4:640210/84‑1
                                                                                                                                          GTTGACGCCGCATCCGGCATGA‑‑ACTCCCTGCAAACCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCGTCAGGCAATGTTGCGTTTGTTATCCGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTGATTGCGTACCC                        <  4:558538/150‑1
                                                                                                                                                    CATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTA              <  4:772433/150‑1
                                                                                                                                                     ATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGC                                                                                                  <  4:672112/65‑1
                                                                                                                                                     ATCCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGC                                                                                                  >  3:672112/1‑65
                                                                                                                                                       CCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATC           >  3:281209/1‑150
                                                                                                                                                       CCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGT                                                                                                                    <  1:855955/45‑1
                                                                                                                                                       CCGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGT                                                                                                                    >  2:855955/1‑45
                                                                                                                                                        CGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCG          >  1:389445/1‑150
                                                                                                                                                        CGGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATAGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCG          >  2:1449337/1‑150
                                                                                                                                                         GGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGC         >  1:498044/1‑150
                                                                                                                                                         GGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGC         <  4:706780/150‑1
                                                                                                                                                         GGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGG                                                                                          <  4:977319/69‑1
                                                                                                                                                         GGCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGG                                                                                          >  3:977319/1‑69
                                                                                                                                                          GCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTT                                                                   >  3:83358/1‑91
                                                                                                                                                          GCATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTT                                                                   <  4:83358/91‑1
                                                                                                                                                           CATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGA       <  3:495318/150‑1
                                                                                                                                                            ATGA‑‑ACACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGAC      <  2:458397/150‑1
                                                                                                                                                            ATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGAC      >  4:539480/1‑150
                                                                                                                                                            ATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTG                                                                                                             >  3:832577/1‑47
                                                                                                                                                            ATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTG                                                                                                             <  4:832577/47‑1
                                                                                                                                                              GA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTG                                                                                                                     <  2:814190/37‑1
                                                                                                                                                              GA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTG                                                                                                                     >  1:814190/1‑37
                                                                                                                                                                  AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACAT  >  1:1126957/1‑150
                                                                                                                                                                  AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAG                                                                                                                  >  3:932335/1‑38
                                                                                                                                                                  AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAG                                                                                                                  <  4:932335/38‑1
                                                                                                                                                                                                                                                                                                                        
ACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCatga‑‑a‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_tpiA/1552226‑1552071
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcATGA‑‑AAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTCTAAATGGCGCTTTATAAAGTGCCATTTTTTTATTGCGTAACCAGACGGCGTAATCGCGACACAT  >  NC_000913_3_pae_tpiA/1552279‑1552432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.