New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 2497022121 (0.880)24 (0.190) 21/222 10.6 17.9% intergenic (+30/+35) ypdK/alaC inner membrane protein/glutamate‑pyruvate aminotransferase; glutamic‑pyruvic transaminase (GPT); alanine transaminase
?NC_000913_3_pae_tpiA = 2497026 110 (0.880)intergenic (+34/+31) ypdK/alaC inner membrane protein/glutamate‑pyruvate aminotransferase; glutamic‑pyruvic transaminase (GPT); alanine transaminase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 136 total aligned reads displayed.

AATGAAGTCATTCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGTTTTCAATCA  >  NC_000913_3_pae_tpiA/2496875‑2497169
                                                                                                                                                   |                                                                                                                                                    
aaTGAAGTCATTCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAAAAAAAAAAAAAAAAACAGGAGCCAt                                                                                                                                                    <  2:41749/150‑1 (MQ=255)
 aTGAAGTCATTCAGGCGTAACAGAAAGTACGCGGAGAGATGTAAACTGAAATATCGCTAAATGCGCATTTCTGTTATGATCACCGTTTGCGCCGGTACTTTTTCCCTGATGACCAAAAAGCAAACCCCGCACGGAAAACCAGCAGCCATc                                                                                                                                                   >  2:1314085/1‑150 (MQ=255)
    aaGTCATTCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑gg                                                                                                                                               >  3:933592/1‑150 (MQ=255)
      gTCATTCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCt                                                                                                                                             >  1:801375/1‑150 (MQ=255)
          ttCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTg                                                                                                                                         >  2:1162082/1‑150 (MQ=255)
          ttCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTg                                                                                                                                         >  2:1162489/1‑150 (MQ=255)
             aGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTCTATGGGCCTTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCCCCTGttt                                                                                                                                      >  2:1107320/1‑150 (MQ=255)
              ggCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGtttt                                                                                                                                     <  2:585768/150‑2 (MQ=255)
                 gTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCTGAT‑GGCTCCTGtttttca                                                                                                                                  <  3:599406/150‑5 (MQ=255)
                 gTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCAt                                                                                                                                  >  2:1627709/1‑150 (MQ=255)
                 gTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGtttttca                                                                                                                                  <  3:856061/150‑5 (MQ=255)
                      aGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTg                                                                                                                             >  2:1638592/1‑150 (MQ=255)
                        tAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGttt                                                                                                                                      <  2:409859/139‑1 (MQ=255)
                                cgGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGgtgt                                                                                                                   >  3:97205/1‑150 (MQ=255)
                                 ggAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGtt                                                                                                                  >  2:522611/1‑150 (MQ=255)
                                   agagaTGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTa                                                                                                                <  1:1253700/150‑1 (MQ=255)
                                    gagaTGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTAt                                                                                                               <  4:893216/150‑1 (MQ=255)
                                     agaTGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTAtt                                                                                                              >  1:1748445/1‑150 (MQ=255)
                                       aTGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGtttttcat                                                                                                                                 <  1:202027/129‑6 (MQ=38)
                                        tGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCTGAT‑GGCTCCTGtttttca                                                                                                                                  <  2:1676311/127‑5 (MQ=255)
                                        tGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGtttttca                                                                                                                                  >  1:1676311/1‑123 (MQ=255)
                                         gTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCcgc                                                                                                          <  2:471531/150‑1 (MQ=255)
                                         gTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGttttt                                                                                                                                    >  2:609944/1‑122 (MQ=255)
                                          tAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCcgcg                                                                                                         <  1:789368/150‑1 (MQ=255)
                                               tGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTc                                                                                                    >  3:331406/1‑150 (MQ=255)
                                               tGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTc                                                                                                    <  4:331406/150‑1 (MQ=255)
                                               tGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGttt                                                                                                                                      <  1:1682404/116‑1 (MQ=255)
                                                 aaaTATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  <  2:38285/150‑1 (MQ=255)
                                                 aaaTATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  <  1:1627709/150‑1 (MQ=255)
                                                    tatTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGaa                                                                                               <  2:1214409/150‑1 (MQ=255)
                                                    tatTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGaa                                                                                               >  4:51611/1‑150 (MQ=255)
                                                          tttATGGGCATTTCTCTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGtt                                                                                         <  1:989613/150‑1 (MQ=255)
                                                            tATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTtg                                                                                       <  1:862682/150‑1 (MQ=255)
                                                               gggCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTtgctg                                                                                    >  2:239795/1‑150 (MQ=255)
                                                               gggCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTtgctg                                                                                    <  4:933592/150‑1 (MQ=255)
                                                                ggCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGa                                                                                                >  4:194336/1‑137 (MQ=255)
                                                                ggCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGa                                                                                                <  3:194336/137‑1 (MQ=255)
                                                                 gCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGcc                                                                                                                                                      >  4:387014/1‑83 (MQ=255)
                                                                 gCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGttt                                                                                                                                      <  1:1273148/98‑1 (MQ=38)
                                                                 gCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCC‑TGATGGCTCCTGttt                                                                                                                                      >  2:1273148/1‑98 (MQ=38)
                                                                    tttCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGgtgt                                                                                                                   <  3:180847/114‑1 (MQ=255)
                                                                      tCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCgg                                                                             <  1:1632839/150‑1 (MQ=255)
                                                                      tCTTTTATAGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCgg                                                                             <  2:1548253/150‑1 (MQ=255)
                                                                       cTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCggg                                                                            <  1:952384/150‑1 (MQ=255)
                                                                        ttttATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGgt                                                                           <  1:669637/150‑1 (MQ=255)
                                                                             tGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGAAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTaa                                                                      <  2:989136/150‑1 (MQ=255)
                                                                               gTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCGATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  >  1:1013508/1‑120 (MQ=255)
                                                                               gTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCGATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  <  2:1013508/120‑1 (MQ=255)
                                                                               gTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAAc                                                                    <  1:549339/150‑1 (MQ=255)
                                                                               gTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTATGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTtgct                                                                                     <  4:749594/133‑1 (MQ=255)
                                                                               gTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTATGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTtgct                                                                                     >  3:749594/1‑133 (MQ=255)
                                                                                  aTCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑gg                                                                                                                                               >  2:155880/1‑72 (MQ=255)
                                                                                  aTCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGt                                                                 >  3:458612/1‑150 (MQ=255)
                                                                                               gTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGgta                                                                          >  1:1451/1‑128 (MQ=255)
                                                                                               gTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGgta                                                                          <  2:1451/128‑1 (MQ=255)
                                                                                                 aCTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  >  2:1693824/1‑102 (MQ=255)
                                                                                                 aCTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  <  1:1693824/102‑1 (MQ=255)
                                                                                                    tttGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCtt                                               <  1:1048628/150‑1 (MQ=255)
                                                                                                    tttGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCtt                                               <  2:801375/150‑1 (MQ=255)
                                                                                                        cccTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCt                                                <  4:188158/145‑1 (MQ=255)
                                                                                                        cccTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCt                                                >  3:188158/1‑145 (MQ=255)
                                                                                                          cTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATcc                                         <  1:1207082/150‑1 (MQ=255)
                                                                                                          cTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATcc                                         >  4:809447/1‑150 (MQ=255)
                                                                                                           tgatgaTCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  <  3:485877/92‑1 (MQ=255)
                                                                                                           tgatgaTCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGt                                                                                                  >  4:485877/1‑92 (MQ=255)
                                                                                                              tgatCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCctct                                     <  1:1254461/150‑1 (MQ=255)
                                                                                                              tgatCTAAAAGCAAACGGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGCCGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCctct                                     <  3:452448/150‑1 (MQ=255)
                                                                                                               gatCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCt                                                <  1:412340/138‑1 (MQ=255)
                                                                                                                atCTAAAAGCAAACTGTGCAATGAAAAACAGGAGTTATCA‑GGCTGCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTCCGTGACTATGTTTGCTGCTGGCGGGCTGCAAACCGTCGGCGCGGAGCCTCGCCTTAATCCCTCCGa                                   <  4:712530/150‑1 (MQ=255)
                                                                                                                atCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGt                                                                                                                                        <  1:69619/49‑1 (MQ=255)
                                                                                                                atCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGt                                                                                                                                        >  2:69619/1‑49 (MQ=255)
                                                                                                                 tCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCg                                                               >  2:1386219/1‑121 (MQ=255)
                                                                                                                 tCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCg                                                               <  1:1386219/121‑1 (MQ=255)
                                                                                                                 tCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGAt                                  <  3:809447/150‑1 (MQ=255)
                                                                                                                   tAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATgg                                >  4:1016631/1‑150 (MQ=255)
                                                                                                                    aaaaGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGc                               >  3:412397/1‑150 (MQ=255)
                                                                                                                     aaaGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTGGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGTcc                              >  2:557232/1‑150 (MQ=255)
                                                                                                                     aaaGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGcc                              <  2:698454/150‑1 (MQ=255)
                                                                                                                      aaGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCt                             >  1:685673/1‑150 (MQ=255)
                                                                                                                        gCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCg                                                  <  4:851112/127‑1 (MQ=255)
                                                                                                                        gCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCg                                                  >  3:851112/1‑127 (MQ=255)
                                                                                                                        gCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGa                           >  2:473969/1‑150 (MQ=255)
                                                                                                                         cAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGAc                          <  1:1162082/150‑1 (MQ=255)
                                                                                                                         cAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGAc                          <  1:592857/150‑1 (MQ=255)
                                                                                                                          aaaCTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTc                                                                >  3:445922/1‑111 (MQ=255)
                                                                                                                          aaaCTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTc                                                                <  4:445922/111‑1 (MQ=255)
                                                                                                                              tgtgCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATa                     <  1:239795/150‑1 (MQ=255)
                                                                                                                                  cAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGACCTg                            >  1:511920/1‑139 (MQ=255)
                                                                                                                                   aaTGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTc                >  2:918333/1‑150 (MQ=255)
                                                                                                                                     tGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTcgc              <  3:667242/150‑1 (MQ=255)
                                                                                                                                      gAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGc                               <  1:1171709/132‑1 (MQ=255)
                                                                                                                                        aaaaCAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCt                                                >  3:294348/1‑113 (MQ=255)
                                                                                                                                         aaaCAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGtt          >  2:714701/1‑150 (MQ=255)
                                                                                                                                          aaCAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGgta                                                                          >  1:1446109/1‑85 (MQ=255)
                                                                                                                                          aaCAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGttt         <  1:457320/150‑1 (MQ=255)
                                                                                                                                            cAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGTTTTc       <  3:302602/150‑1 (MQ=255)
                                                                                                                                            cAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGTTTTc       <  3:1016631/150‑1 (MQ=255)
                                                                                                                                                 gCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTa                                             >  2:1195092/1‑107 (MQ=255)
                                                                                                                                                 gCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTa                                             <  1:1195092/107‑1 (MQ=255)
                                                                                                                                                 gCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGTTTTCAATCa  <  2:1699139/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AATGAAGTCATTCAGGCGTAACAGTAATTACGCGGAGAGATGTAAAGTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAAAAGCAAACTGTGCAATGAAAAACAGGAGCCATCA‑GGCTCCTGTTTGCATTTCTGACGACGGTGTTTATTCCGCGTTTTCGTGAATATGTTTGCTGCTGGCGGGTAGTAAACCGTCGGCACGGAACATCGCTTTAATCCCTCTGATGGCCTGACGAATACGGTCGCGGTTTTCAATCA  >  NC_000913_3_pae_tpiA/2496875‑2497169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.