New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 3368204 =162 (1.080)38 (0.290) 31/224 8.2 20.4% coding (378/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily
?NC_000913_3_pae_tpiA 3368237 = 153 (1.160)coding (411/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 200 total aligned reads displayed.

CGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACT  >  NC_000913_3_pae_tpiA/3368088‑3368386
                                                                                                                                                      |                                                                                                                                                      
 gCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTcc                                                                                                                                                       >  2:921179/1‑150 (MQ=255)
 gCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTcc                                                                                                                                                       <  2:424545/150‑1 (MQ=255)
 gCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTcc                                                                                                                                                       >  1:1731487/1‑150 (MQ=255)
   cAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTcccc                                                                                                                                                     >  4:408448/1‑150 (MQ=255)
     aaTGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCtt                                                                                                                                                   >  4:179969/1‑150 (MQ=255)
                     ctctTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGTCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCATTAGTCCCATCGCCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTAc                                                                                                                                   >  1:1094435/1‑150 (MQ=255)
                     ctctTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCt                                                                                                                                     <  1:512247/148‑1 (MQ=255)
                     ctctTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTAc                                                                                                                                   <  3:655515/150‑1 (MQ=255)
                      tctTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACg                                                                                                                                  >  2:750590/1‑150 (MQ=255)
                       ctTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGt                                                                                                                                 >  1:1238594/1‑150 (MQ=255)
                             tCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGttt                                                                                                                           >  1:1799512/1‑150 (MQ=255)
                                aCATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGAAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAACTCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACt                                                                                                                        >  2:984989/1‑150 (MQ=255)
                                   tGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTc                                                                                                                     <  2:1550190/150‑1 (MQ=255)
                                   tGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTc                                                                                                                     <  1:750590/150‑1 (MQ=255)
                                      tGAAATTCACCAGCCACGGTCTGGCGAATGAACACCATTGGGAAGTACGCAGACACCGTCTGCAGAATTCCCATCGGCCAAGATTTGGCAGAC‑GCTGTCTGCCAACTATTTCCCCTTGCCCAGGACCACCTACGTCCGTTTACTTTCCGt                                                                                                                  <  2:1094435/150‑1 (MQ=255)
                                      tGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTAc                                                                                                                                   >  1:463527/1‑133 (MQ=255)
                                      tGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTAc                                                                                                                                   <  2:463527/133‑1 (MQ=255)
                                      tGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGt                                                                                                                  >  4:1096574/1‑150 (MQ=255)
                                           ttCGCCAGACATTGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑aaaa                                                                                                            >  2:1397913/1‑150 (MQ=255)
                                           ttCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTcc                                                                                                                    <  3:132896/143‑1 (MQ=255)
                                            tcgccAGACATTGTCTGGTGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTcc                                                                                                                    <  4:122749/139‑1 (MQ=255)
                                            tCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑aaaaa                                                                                                           >  1:768032/1‑150 (MQ=255)
                                             cgccAGACATTGTCTGGTGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTAc                                                                                                                                   <  3:900188/124‑1 (MQ=255)
                                              aCCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACg                                                                                                         >  1:1659284/1‑150 (MQ=255)
                                                 aGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTg                                                                                                      >  2:207787/1‑150 (MQ=255)
                                                  gACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGa                                                                                                     <  4:898867/150‑1 (MQ=255)
                                                       tGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCg                                                                                                                   >  1:101954/1‑132 (MQ=255)
                                                       tGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCg                                                                                                                   <  2:101954/132‑1 (MQ=255)
                                                        gTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCg                                                                                               <  1:1381805/150‑1 (MQ=255)
                                                           tgtcGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAGGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAg                                                                                            <  1:1011550/147‑1 (MQ=255)
                                                           tGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAg                                                                                            <  3:151165/150‑1 (MQ=255)
                                                           tGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAg                                                                                            >  2:670795/1‑150 (MQ=255)
                                                            ggCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGc                                                                                           >  1:165081/1‑150 (MQ=255)
                                                                aaTTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGc                                                                                                        <  2:1658166/133‑1 (MQ=255)
                                                                 aTTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTa                                                                                      <  4:613250/150‑1 (MQ=255)
                                                                  ttAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTAt                                                                                     <  2:775200/150‑1 (MQ=255)
                                                                      cacCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGaaa                                                                                 <  2:1799512/150‑1 (MQ=255)
                                                                         cATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCt                                                                                                       <  2:234229/125‑1 (MQ=255)
                                                                         cATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCt                                                                                                       >  1:234229/1‑125 (MQ=255)
                                                                          aTTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCtt                                                                                         <  1:374925/138‑1 (MQ=255)
                                                                          aTTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAaga                                                                             >  3:117366/1‑150 (MQ=255)
                                                                          aTTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAaga                                                                             <  1:922958/150‑1 (MQ=255)
                                                                           ttGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAagag                                                                            <  3:766306/150‑1 (MQ=255)
                                                                           ttGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAagag                                                                            <  4:365346/150‑1 (MQ=255)
                                                                              ggAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACg                                                                         >  2:542367/1‑150 (MQ=255)
                                                                                aaTTCTGCAGACGGTGTCTGCGGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTTAAAAAACGCTGAc                                                                                                    >  2:719903/1‑122 (MQ=38)
                                                                                aaTTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCCAGTCTTTCTCCTTTCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAATGAGTCGCt                                                                       >  1:1700028/1‑150 (MQ=255)
                                                                                  ttCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTcc                                                                     <  1:1528309/150‑1 (MQ=255)
                                                                                     cGCAGCCACCGTCTGCAGAAATACGATCGGCAAAGATTTGGACCAC‑GCTGTCTGCCAAATCTTCCCCCTTGCCAAGGTCCCCCTCCGTCCCTTTACTTTCCGTC‑AAGAACGCTGCCGCCCGCAGCTTCTATGAAAAAGAGACGCTCCGCt                                                                  <  4:250871/150‑1 (MQ=255)
                                                                                      gCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAaga                                                                             <  3:826405/138‑1 (MQ=255)
                                                                                      gCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAaga                                                                             >  4:826405/1‑138 (MQ=255)
                                                                                         gacggtgTCTGCGGAATTCCCGTCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTAt                                                                                     <  1:1573068/121‑1 (MQ=255)
                                                                                         gacggtgTCTGCGGAATTCCCGTCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTAt                                                                                     >  2:1573068/7‑127 (MQ=255)
                                                                                         gACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTgg                                                              <  2:1731487/150‑1 (MQ=255)
                                                                                            acCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTg                                                           >  1:1451047/1‑150 (MQ=255)
                                                                                              cGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCg                                                                                               <  2:618847/112‑1 (MQ=255)
                                                                                              cGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGt                                                         >  1:1051475/1‑150 (MQ=255)
                                                                                               gTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAgaga                                                                           <  1:876485/131‑1 (MQ=255)
                                                                                                    cggAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   >  2:609409/3‑150 (MQ=255)
                                                                                                    cAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCa                                                                                                                                        <  1:708572/66‑1 (MQ=255)
                                                                                                    cAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTc                                                        <  3:1019108/145‑1 (MQ=255)
                                                                                                    cAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   <  2:1238594/150‑1 (MQ=255)
                                                                                                    cAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   >  2:1663973/1‑150 (MQ=255)
                                                                                                    cAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   >  3:952406/1‑150 (MQ=255)
                                                                                                    cAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   <  1:702241/150‑1 (MQ=255)
                                                                                                            ccATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCg                                                                                               <  4:765880/98‑1 (MQ=255)
                                                                                                             cATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGttt                                                                                                                           <  3:511747/70‑1 (MQ=255)
                                                                                                              aTCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTaga                                         >  1:355813/1‑150 (MQ=255)
                                                                                                                cGGCCAAGATTTGGCAGAC‑GCTGTCTGCCAAAGCTTGCCCCTTGCCCAGGTCCACCTACGTCCGTGTCCTTTCCGTT‑AAAATCGCTTCCGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGc                                       <  3:458303/150‑1 (MQ=255)
                                                                                                                 gggaaaGATTTGGCAGACAGC‑GTCTGCCAAATCTTTGCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTa                                                                                      <  2:253910/99‑1 (MQ=25)
                                                                                                                 gggaaaGATTTGGCAGACAGC‑GTCTGCCAAATCTTTGCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTa                                                                                      >  1:253910/4‑102 (MQ=25)
                                                                                                                  gCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGa                                                                                                     <  2:1629700/86‑1 (MQ=255)
                                                                                                                   gaaaGATTTGGCAGACAGC‑GTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   <  4:1549/134‑1 (MQ=255)
                                                                                                                   gaaaGATTTGGCAGAC‑AGCGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTGCGCTGTGGCTGGTCTGTTCGCCa                                               <  3:157982/138‑1 (MQ=39)
                                                                                                                   cAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGc                                    >  2:1700206/1‑150 (MQ=255)
                                                                                                                        aTTTGGCAGACAGC‑GTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGaa                                                                                  <  1:580371/99‑1 (MQ=38)
                                                                                                                        aTTTGGCAGACAGC‑GTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGaa                                                                                  >  2:580371/1‑99 (MQ=38)
                                                                                                                         tttGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTa                                                                                      <  1:11994/94‑1 (MQ=255)
                                                                                                                         tttGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTa                                                                                      >  2:11994/1‑94 (MQ=255)
                                                                                                                          ttGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTc                                                   <  2:1417163/128‑1 (MQ=255)
                                                                                                                          ttGGCAGAC‑AGCGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCg                                                                                               >  4:507198/1‑84 (MQ=38)
                                                                                                                             gCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGAc                          <  2:372655/150‑1 (MQ=255)
                                                                                                                             gCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGAc                          >  1:542538/1‑150 (MQ=255)
                                                                                                                               aGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGAccc                        >  1:1473374/1‑150 (MQ=255)
                                                                                                                                    agcgTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTg                                                           <  3:309921/108‑1 (MQ=255)
                                                                                                                                     cTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGttt                   <  3:1096574/150‑1 (MQ=255)
                                                                                                                                      tGTCTGCCAAGTCTTGCCCCTTGCCCAGGGCAACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGtttt                  <  1:984989/150‑1 (MQ=255)
                                                                                                                                        tCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTa                                                                                      >  2:50806/1‑80 (MQ=255)
                                                                                                                                        tCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTAt                <  2:1051475/150‑1 (MQ=255)
                                                                                                                                           gCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAg             >  1:1402319/1‑150 (MQ=255)
                                                                                                                                            ccAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCt                                            >  4:915244/1‑118 (MQ=255)
                                                                                                                                            ccAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGc            <  3:408448/150‑1 (MQ=255)
                                                                                                                                             cAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCg           >  3:50402/1‑150 (MQ=255)
                                                                                                                                              aaaGCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCgg          >  4:864335/1‑150 (MQ=255)
                                                                                                                                               aaTCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGa         <  2:832325/150‑1 (MQ=255)
                                                                                                                                                  cTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAg                                              <  3:881996/110‑1 (MQ=255)
                                                                                                                                                  cTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCg           >  4:172802/1‑145 (MQ=255)
                                                                                                                                                    ttCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCtttt                                                                                       <  2:707773/67‑1 (MQ=255)
                                                                                                                                                    ttCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACacta    <  3:179235/150‑1 (MQ=255)
                                                                                                                                                      ccccTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGa                                                                                   >  1:640030/1‑69 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGAC‑GCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTT‑AAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACT  >  NC_000913_3_pae_tpiA/3368088‑3368386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.