BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913_3_pae_tpiA	3,431,411	T→C	N2S (AAT→AGT)	tsaC ←	tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine‑dependent ADP‑forming ATPase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913_3_pae_tpiA	3,431,411	0	T	C	100.0%	423.4 / NA	118	N2S (AAT→AGT)	tsaC	tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine‑dependent ADP‑forming ATPase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (62/56); total (62/56)

Only 100 of 119 total aligned reads displayed.

TTAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTAATGGCA  >  NC_000913_3_pae_tpiA/3431268‑3431555

ttAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGt                                                                                                                                            >  4:344825/1‑150 (MQ=255)

ttAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGt                                                                                                                                            <  4:420406/150‑1 (MQ=255)

    cTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGttatt                                                                                                                                        >  1:191977/1‑150 (MQ=255)

     tCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGTTAGCGTCTCTTTGCAGGTTATTACTCACGttatta                                                                                                                                       >  2:439563/1‑150 (MQ=255)

       cAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTattatt                                                                                                                                     >  2:754256/1‑150 (MQ=255)

            gTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATCGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTccgcc                                                                                                                                <  1:1006678/150‑1 (MQ=255)

                   cACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCg                                                                                                                         >  4:271569/1‑150 (MQ=255)

                   cACTGCTGTTTCGCGATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCg                                                                                                                         <  2:1000875/150‑1 (MQ=255)

                     ctgctgTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGc                                                                                                                       >  1:1283285/1‑150 (MQ=255)

                       gctgTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTccgc                                                                                                                                 <  2:716409/138‑1 (MQ=255)

                       gctgTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTccgc                                                                                                                                 >  1:716409/1‑138 (MQ=255)

                         tgTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTc                                                                                                                   <  4:226639/150‑1 (MQ=255)

                             tCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCcaca                                                                                                               >  2:207367/1‑150 (MQ=255)

                             tCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCcaca                                                                                                               <  3:521215/150‑1 (MQ=255)

                              cGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACAt                                                                                                              <  2:1126461/150‑1 (MQ=255)

                                 tATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCttt                                                                                                                    <  3:527259/141‑1 (MQ=255)

                                 tATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCttt                                                                                                                    >  4:527259/1‑141 (MQ=255)

                                 tATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGt                                                                                                           >  3:404113/1‑150 (MQ=255)

                                   tCAGGATCGCACCCAACANCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGttt                                                                                                         >  1:516697/1‑150 (MQ=255)

                                   tCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGaaa                                                                                                                            >  1:1220191/1‑131 (MQ=255)

                                   tCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGaaa                                                                                                                            <  2:1220191/131‑1 (MQ=255)

                                     aGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTAc                                                                                                       >  4:359683/1‑150 (MQ=255)

                                        aTCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTgg                                                                                                    <  1:193765/150‑1 (MQ=255)

                                         tCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGc                                                                                                   <  1:754256/150‑1 (MQ=255)

                                         tCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGc                                                                                                   >  1:1333708/1‑150 (MQ=255)

                                            cACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGcaca                                                                                                >  3:727654/1‑150 (MQ=255)

                                               ccAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa                                                                                             >  1:243397/1‑150 (MQ=255)

                                                 aaCACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCca                                                                                                                 >  4:250845/1‑128 (MQ=255)

                                                 aaCACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCCTTCCACATTGTTTACTGGCCCAACAgg                                                                                           >  2:837539/1‑149 (MQ=255)

                                                 aaCACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGATCTTCATTGAGAACATCTATGGCAGCTGCGATAGAGTCTATTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAgt                                                                                           >  2:525122/1‑150 (MQ=255)

                                                   cacCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAgtgt                                                                                         <  3:355752/150‑1 (MQ=255)

                                                     ccGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGttt                                                                                       >  2:454503/1‑150 (MQ=255)

                                                      cGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGtttt                                                                                      <  2:1333708/150‑1 (MQ=255)

                                                      cGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGtttt                                                                                      >  2:372619/1‑150 (MQ=255)

                                                           aCGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACAcc                                                                                 <  4:782937/150‑1 (MQ=255)

                                                             ggCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCt                                                                               >  1:1177772/1‑150 (MQ=255)

                                                             ggCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCt                                                                               >  4:833118/1‑150 (MQ=255)

                                                                ttCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTgcg                                                                            >  4:520976/1‑150 (MQ=255)

                                                                 tCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTgcgc                                                                           >  1:689300/1‑150 (MQ=255)

                                                                    gTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTAc                                                                                                       >  2:1258380/1‑119 (MQ=255)

                                                                    gTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTAc                                                                                                       <  1:1258380/119‑1 (MQ=255)

                                                                    gTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGt                                                                        >  1:545783/1‑150 (MQ=255)

                                                                    gTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGt                                                                        >  1:1034554/1‑150 (MQ=255)

                                                                     ttGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtt                                                                       <  4:835293/150‑1 (MQ=255)

                                                                        gATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttc                                                                    >  3:453285/1‑150 (MQ=255)

                                                                         aTAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGc                                                                                                   >  2:144784/1‑118 (MQ=255)

                                                                         aTAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGc                                                                                                   <  1:144784/118‑1 (MQ=255)

                                                                          tAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttctt                                                                  <  2:191977/150‑1 (MQ=255)

                                                                            ggCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttctttt                                                                <  2:612011/150‑1 (MQ=255)

                                                                             gCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttcttttt                                                               >  2:317272/1‑149 (MQ=255)

                                                                             gCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttcttttc                                                               >  1:114976/1‑150 (MQ=255)

                                                                               gATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGa                                                             <  4:137421/150‑1 (MQ=255)

                                                                                aTGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGAt                                                            <  1:1101732/150‑1 (MQ=255)

                                                                                  gACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCATCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGa                                                          <  2:1003487/150‑1 (MQ=255)

                                                                                     acGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAAc                                                                                                                           <  2:861844/82‑1 (MQ=255)

                                                                                     acGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAAc                                                                                                                           >  1:861844/1‑82 (MQ=255)

                                                                                       gTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGc                                                     <  4:727654/150‑1 (MQ=255)

                                                                                           ttcATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGAt                                                 >  1:1285152/1‑150 (MQ=255)

                                                                                            tcATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATa                                                >  2:820149/1‑150 (MQ=255)

                                                                                             cATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATaa                                               <  3:836385/150‑1 (MQ=255)

                                                                                             cATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATaa                                               <  3:344825/150‑1 (MQ=255)

                                                                                              aTTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAAt                                              <  3:833118/150‑1 (MQ=255)

                                                                                              aTTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAAt                                              >  1:417475/1‑150 (MQ=255)

                                                                                               ttGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATg                                             >  2:120016/1‑150 (MQ=255)

                                                                                                  agaACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGaca                                          <  1:779915/150‑1 (MQ=255)

                                                                                                  agaACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGaca                                          <  2:1283285/150‑1 (MQ=255)

                                                                                                    agacgcTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTAGTATTCCGCCGAAACCGGCTTTCTACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGacaca                                        >  2:1180433/6‑149 (MQ=255)

                                                                                                     aCATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTc                                       <  2:864294/150‑1 (MQ=255)

                                                                                                       aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGc                                                                                                                       >  2:465540/1‑68 (MQ=255)

                                                                                                       aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGc                                                                                                                       <  1:465540/68‑1 (MQ=255)

                                                                                                       aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAg                                     >  4:172667/1‑150 (MQ=255)

                                                                                                       aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAg                                     >  4:527671/1‑150 (MQ=255)

                                                                                                       aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTACACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACt                                        <  3:34266/147‑1 (MQ=255)

                                                                                                       aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTACACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACt                                        >  4:34266/1‑147 (MQ=255)

                                                                                                        tCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCg                                                              >  3:115568/1‑124 (MQ=255)

                                                                                                        tCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCg                                                              <  4:115568/124‑1 (MQ=255)

                                                                                                           aTCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATaa                                               >  3:106969/1‑136 (MQ=255)

                                                                                                           aTCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCa                                 >  2:952702/1‑150 (MQ=255)

                                                                                                           aTCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCa                                 >  2:128523/1‑150 (MQ=255)

                                                                                                            tCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCAt                                >  1:381564/1‑150 (MQ=255)

                                                                                                               cAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTa                                                                                                        >  4:38131/1‑75 (MQ=255)

                                                                                                               cAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTa                                                                                                        <  3:38131/75‑1 (MQ=255)

                                                                                                               cAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtt                                                                       <  1:1054670/108‑1 (MQ=255)

                                                                                                               cAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtt                                                                       >  2:1054670/1‑108 (MQ=255)

                                                                                                                   tGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCGACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAg                         <  2:966760/150‑1 (MQ=255)

                                                                                                                    gCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACTCTCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGc                        <  2:887931/150‑1 (MQ=255)

                                                                                                                     cGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCt                       <  3:655773/150‑1 (MQ=255)

                                                                                                                       aTAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTAt                     >  4:757077/1‑150 (MQ=255)

                                                                                                                        tAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATg                    >  4:189345/1‑150 (MQ=255)

                                                                                                                         aGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATgg                   <  3:359683/150‑1 (MQ=255)

                                                                                                                          gCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTa                                                                                                        >  1:435126/1‑64 (MQ=255)

                                                                                                                          gCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTa                                                                                                        <  2:435126/64‑1 (MQ=255)

                                                                                                                          gCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATggg                  >  2:844945/1‑150 (MQ=255)

                                                                                                                           cGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGt                 <  3:757077/150‑1 (MQ=255)

                                                                                                                           cGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGt                 <  3:249666/150‑1 (MQ=255)

                                                                                                                             tctcTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGttt               <  4:453285/150‑1 (MQ=255)

                                                                                                                                ctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGaa            <  1:128523/150‑1 (MQ=255)

                                                                                                                                ctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGaa            <  2:689300/150‑1 (MQ=255)

                                                                                                                                     cAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGc                                                     <  1:875487/104‑1 (MQ=255)

                                                                                                                                          tattacTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTAATGGCa  >  3:489301/1‑150 (MQ=255)

TTAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTAATGGCA  >  NC_000913_3_pae_tpiA/3431268‑3431555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`