| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 3,853,806 | T→C | intergenic (+164/‑116) | tisB → / → emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 3,853,806 | 0 | T | C | 94.8% | 372.3 / 4.9 | 116 | intergenic (+164/‑116) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base C (62/47); total (65/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
AAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTT > NC_000913_3_pae_tpiA/3853662‑3853950 | aaaGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCa > 4:189247/1‑150 (MQ=255) gAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTg > 2:1319352/1‑150 (MQ=255) cGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCg > 1:449216/1‑150 (MQ=255) ggAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCATCATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGta < 3:656455/150‑1 (MQ=255) tttcccGGTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGtat > 4:716432/5‑150 (MQ=255) gAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTc > 1:1014841/1‑141 (MQ=255) gAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTc < 2:1014841/141‑1 (MQ=255) tcTCCCCTTTGATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTTCCGCTTTTGTTTACATATTCTGCCGCTAAACAAGCCCCCATTCCTTGCGTATATCTgg < 4:508166/149‑1 (MQ=255) gCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTgg < 1:230445/150‑1 (MQ=255) ccTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCt < 2:301188/143‑1 (MQ=255) ccTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCt > 1:301188/1‑143 (MQ=255) cTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACa > 3:528330/1‑150 (MQ=255) ttttATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACAt > 1:502662/1‑150 (MQ=255) tttATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCCGGCTAACAtt > 2:38065/1‑150 (MQ=255) ttATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATtc > 1:747793/1‑150 (MQ=255) ttATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATtc < 2:1129743/150‑1 (MQ=255) tatTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATtcatc < 2:199611/150‑1 (MQ=255) tttAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCaa > 3:75374/1‑150 (MQ=255) cGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGa < 3:695803/150‑1 (MQ=255) gTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGAt > 1:181491/1‑150 (MQ=255) ttcGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATa > 2:963943/3‑150 (MQ=255) gggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt < 4:528330/150‑1 (MQ=255) ggTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc < 4:75374/150‑1 (MQ=255) tgtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGc < 1:787577/109‑1 (MQ=255) tgtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc < 4:372393/150‑1 (MQ=255) tCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTccc > 3:585874/1‑150 (MQ=255) gatgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCa > 2:249917/1‑150 (MQ=255) gatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc < 3:350752/140‑1 (MQ=255) gatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc > 4:350752/1‑140 (MQ=255) tgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATgg < 2:638419/150‑1 (MQ=255) cTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCa > 1:651883/1‑141 (MQ=255) cTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCa < 2:651883/141‑1 (MQ=255) cTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGa > 2:305116/1‑150 (MQ=255) cGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGc < 1:410183/150‑1 (MQ=255) cGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTCTCACTGTTCTGCAGCTAAAACATGCCCCCTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGc < 3:167813/150‑1 (MQ=255) gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAtt > 1:846580/1‑125 (MQ=255) gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAtt < 2:846580/125‑1 (MQ=255) gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCg < 2:780708/150‑1 (MQ=255) gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCg > 2:872790/1‑150 (MQ=255) cATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACCAACCCCCATTCCTGGCGTATATATGGATAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGt < 3:299082/150‑1 (MQ=255) aTCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTa < 1:1227685/150‑1 (MQ=255) tCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAg > 1:689185/1‑150 (MQ=255) cTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTACGGGAATGCGTAGt > 2:1238174/1‑150 (MQ=255) ttATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATgg > 2:281047/1‑138 (MQ=255) tATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtg > 3:234529/1‑110 (MQ=255) tATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtg < 4:234529/110‑1 (MQ=255) tCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATAATCGGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACt > 1:319868/1‑150 (MQ=255) cGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGACTCCTCTCCCGCATCCATGGGACTGCCCAGTGACTTa > 4:106764/1‑150 (MQ=255) gCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATtc < 1:970333/98‑1 (MQ=255) gCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATtc > 2:970333/1‑98 (MQ=255) ccTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTc > 2:765962/1‑150 (MQ=255) ccTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTc < 2:1123164/150‑1 (MQ=255) cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAt < 2:508496/127‑1 (MQ=255) cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAt > 1:508496/1‑127 (MQ=255) tACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTa > 3:357082/1‑150 (MQ=255) aCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATcccc < 1:1293254/64‑1 (MQ=255) aCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATcccc > 2:1293254/1‑64 (MQ=255) tctctcCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtgtg > 4:330371/1‑98 (MQ=255) tctctcCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtgtg < 3:330371/98‑1 (MQ=255) tctctcCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAattat > 1:301323/1‑150 (MQ=255) tcCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTAttttt > 2:34103/1‑150 (MQ=255) tcCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTAttttt < 3:802645/150‑1 (MQ=255) tcCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTAttttt < 1:34103/150‑1 (MQ=255) ccGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTtat < 1:305116/150‑1 (MQ=255) ccGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTtat < 4:759279/150‑1 (MQ=255) aCATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGc > 4:14553/1‑150 (MQ=255) ttATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATcc > 2:1181362/1‑150 (MQ=255) aTTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGt > 1:46980/1‑150 (MQ=255) aTTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGt < 2:733109/150‑1 (MQ=255) ttGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTg > 1:837085/1‑150 (MQ=255) gCCGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt > 1:385151/1‑150 (MQ=255) cGCTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATgg < 3:784161/100‑1 (MQ=255) gCTTTTGTTTACATATTCTGTCTCTAAACACTCCCCCTTCCCTGGCGTATATCTGGCTAACATTCAACAATGTTGTAGATTCCTCTACCGCATTTATGAAAATGCGTAGTGCCTTATTCTAATTATTTATATAATAGCATCCGTGATatt < 4:353328/150‑3 (MQ=255) cTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGt < 1:672578/143‑1 (MQ=255) cTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGt > 2:672578/1‑143 (MQ=255) cTTTTGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACGTTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg > 3:655798/1‑150 (MQ=255) ttGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaa > 1:783550/1‑150 (MQ=255) tGTTTACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa < 2:502662/150‑1 (MQ=255) tttACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCCGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTTTTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAgg < 1:38065/150‑1 (MQ=255) ttACATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGc > 3:801961/1‑150 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt > 1:195875/1‑61 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt < 2:195875/61‑1 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTc < 1:78555/72‑1 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTc > 2:78555/1‑72 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTta > 1:681461/1‑121 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTta < 2:681461/121‑1 (MQ=255) aCATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaa > 1:122984/1‑150 (MQ=255) cATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCt < 2:629556/43‑1 (MQ=255) cATATTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCt > 1:629556/1‑43 (MQ=255) tatTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTa > 2:566101/1‑103 (MQ=255) tatTCTGCCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTa < 1:566101/103‑1 (MQ=255) cGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCaa < 2:46980/150‑1 (MQ=255) cGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCaa > 3:602249/1‑150 (MQ=255) cGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGAATCCTTCTACTTATTTTTATAACAGCATCCGTGATAATGAAAAGGAAAAGAAACGTCaa > 1:127667/1‑150 (MQ=255) gCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAt < 2:747793/150‑1 (MQ=255) tAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc > 1:23193/1‑61 (MQ=255) aaCAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt > 1:246835/1‑150 (MQ=255) aCAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGtt > 4:104503/1‑150 (MQ=255) aaTCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATa > 4:385433/1‑48 (MQ=255) ttCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATaaa < 1:685904/104‑1 (MQ=255) | AAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTT > NC_000913_3_pae_tpiA/3853662‑3853950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |