Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3423765–3424538	3424538	1–774	15 [14]	[14] 15	[rrfD]–[rrlD]	[rrfD],[rrlD]

CCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACC  >  NC_000913_3_pae_tpiA/3423616‑3423806                                                                                                                                                     |                                           ccTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac                                            >  1:110104/1‑149 (MQ=255)  cTTATCAAGGGTGCGCTCTACCAACTGAGCCAGTTAGGCACGCTCAATGTGATGCTGGGCATTTCACTACTCTCGCATGGGGAGACCCCACACTACCATTGGCGCTACGGCGTTTTACTTCAGAGTTCGGCAGGGGTACAGGTAGGccc                                           >  2:483763/1‑149 (MQ=17)     aCCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGacaacc                                        >  1:681664/1‑149 (MQ=255)      ccAAGGGTGCGCTCTACCAACTGCGAAATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGTTCAGGTGGGcccacca                                       >  2:267194/1‑148 (MQ=17)      ccAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGACAGTTCCTTAATCTCGCATAGAGAAACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGTTGGCGCCACcg                                       >  2:156307/1‑149 (MQ=18)       cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACGACcgc                                      >  1:136378/1‑149 (MQ=255)         aGGGTACGCTCTAACACCTGAGCCATAGCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCgcgc                                    <  1:617018/149‑1 (MQ=255)                 ctctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccg                            <  2:98252/149‑1 (MQ=255)                        aaCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCa                     >  1:75362/1‑149 (MQ=255)                                gagagcAGCACGCTAAATGTGAGGGCTGGCGGTTGCCTACTGTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACGTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGt             <  2:672064/144‑1 (MQ=11)                                 atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGGCAGGCAAATTCTGtt            >  1:377589/1‑149 (MQ=255)                                 atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTAGGACCACCTCCCTACGGCCGCCAGGCAAATTCTGtt            <  1:713520/149‑1 (MQ=255)                                     cAGCACGCTGAATTTGATTCCTGCCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGCTTCTCTTGCCAGTTCAGCGCCCGATACCCGGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt        <  1:709666/149‑1 (MQ=11)                                      aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATc       >  1:141507/1‑149 (MQ=37)                                           gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAcc  >  1:143023/1‑149 (MQ=32)                                                                                                                                                     |                                           CCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACC  >  NC_000913_3_pae_tpiA/3423616‑3423806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑