| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 1,544,021:1 | +A | 79.7% | coding (40/1389 nt) | narU ← | nitrate/nitrite transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 1,544,021 | 1 | . | A | 79.7% | 197.8 / 47.4 | 74 | coding (40/1389 nt) | narU | nitrate/nitrite transporter |
| Reads supporting (aligned to +/- strand): ref base . (8/7); new base A (27/32); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑C‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAA > NC_000913_3_pae_tpiA/1543879‑1544157 | ttGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑A‑a‑aaaa > 1:851144/1‑148 (MQ=255)ttGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGAAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑A‑a‑aaaa < 1:110136/149‑2 (MQ=255) tGAGATTAACGGTAACTGCGCTAAATATCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑A‑a‑aaaag < 1:179891/149‑3 (MQ=255) tGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑A‑a‑aaaag < 1:180247/149‑3 (MQ=255) gagaTTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATATTTTCATTTATTTTCCTAGAAGACAGGATATTCTTATATTCAGTCG‑CG‑A‑a‑aaaaca > 2:428768/1‑146 (MQ=255) agaTTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCACAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑A‑a‑aaaagat > 1:923045/1‑145 (MQ=255) tcaaCGGTAACTGCGCTAAATAGCATCCACACACAGAAGGCAAGAAATAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAAc < 2:887653/147‑1 (MQ=255) cGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACt > 2:426672/1‑149 (MQ=255) cTGCGCTAAATCGCATCCAGACCCAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTAttttt < 1:384252/149‑1 (MQ=255) tGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTtc > 2:1180533/1‑149 (MQ=255) tGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCAAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTtc > 2:412705/1‑149 (MQ=255) tAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCAtt > 1:1420304/1‑149 (MQ=255) tAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCAtt > 1:645217/1‑149 (MQ=255) tAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCAtt > 1:645065/1‑149 (MQ=255) aaaTAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTtctcctct > 2:1109037/1‑145 (MQ=255) aaaTAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCAttt < 1:119670/149‑1 (MQ=255) aaTAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCAtttt < 1:1102009/149‑1 (MQ=255) tAGCATCCAGACACAGAAGGCAAGAAGGAGACAAATGACTTATATCCAAAGATTTCTTCGAACAATATGTTTTCCTTTATTTTCCCAGAAAGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGc < 2:620505/149‑1 (MQ=255) aGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCa < 1:422166/149‑1 (MQ=255) gCATCCAGACACAGAATGCAATAAGTAGACAACTGACTGATATCCAGAGATTCCTTCGAGCAATATGTTTCCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAg < 1:1167453/149‑1 (MQ=255) ccAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGGTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTGTTTTTCTCATTTTGCAGTGcc > 2:366864/1‑149 (MQ=255) cAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCGTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑GGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCa > 1:35163/1‑149 (MQ=255) aGAAGGCAAGAAGTAGACATCTTACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGtt < 2:226852/149‑1 (MQ=255) aGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGtt > 2:1304167/1‑149 (MQ=255) aGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGtt < 1:99179/149‑1 (MQ=255) aGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGtt > 1:1101704/1‑149 (MQ=255) gAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTc > 1:862756/1‑149 (MQ=255) aGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCt < 2:1383710/149‑1 (MQ=255) aagaagTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTcaca < 2:130468/149‑1 (MQ=255) gaagTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATg < 1:721239/149‑1 (MQ=255) aagTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGc > 1:349579/1‑149 (MQ=255) gACAACTGACTGATATCCAGATATTTCTCCGAGCACTAGGTCTTCCATTATTTGCACAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCCTTTTGCAGTGCCATATTATTCCTCAAATGcac‑aca > 2:671650/1‑149 (MQ=255) gACAACTGACTGATATCCAGAGATTTCTTGGAACCAGAGAGTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGACATATTGTTCCTCACATGtac‑cca > 2:671694/1‑149 (MQ=255) aCAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACAt > 1:95161/1‑149 (MQ=255) aaCTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTg > 2:182061/1‑149 (MQ=255) aaCTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTg > 2:1159595/1‑149 (MQ=255) aaCTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTg > 1:1021711/1‑149 (MQ=255) actgaTATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAAt < 2:839389/149‑1 (MQ=255) ccAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGaaaaaaa > 2:217161/1‑149 (MQ=255) ccAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTGTCCACAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGaaaaaaa < 1:264734/149‑1 (MQ=255) ccAGAGATTTCTTCGAGCAATATGCTTTCGTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTGCCTTACATGCAC‑ACATTGGTAATGaaaaaaa < 2:1359971/149‑1 (MQ=255) agaTTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACa > 1:722291/1‑149 (MQ=255) tcGAGCAATATGTTTTCCCTTCTTTGCCCAGAAGGCCTGATTTTCTGGTTTCCAGCCG‑CGAA‑A‑AAAGATAACGACTATTTCTCTCACTGTGCAGTGACATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGa < 1:631096/149‑1 (MQ=255) gAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAgg < 1:31092/149‑1 (MQ=255) ggCAATAGGTTTTCCTTTATTGTCCCAGAAGGCCGTATTTTCTGCTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGt < 2:851144/148‑1 (MQ=255) gaaTTTGTTTTCCTTTATTTTTCTAGAAGGTCGGATTTTCTGGTTTCCAGTCA‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTaa < 2:1209819/148‑1 (MQ=255) cAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTaa < 1:1166511/149‑1 (MQ=255) cAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGCaa > 2:687391/1‑149 (MQ=255) tatGTTTTCCTTTATTTTCCCAGGAGGCCGGATTTTCGGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGgc < 2:1272656/149‑1 (MQ=255) gatGTATTCCTTTATTTGCCCAGGAGGCCGGATTTTCTGTTTTCCAGTCG‑TGAA‑A‑AAAGATAACGACTATTTTTGTCATTTTGCAGTGCCATATTGTTCCTCACAGTTAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGgc < 2:566266/148‑1 (MQ=255) ttttCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCaa > 2:1215696/1‑149 (MQ=255) ccTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGc < 1:795013/149‑1 (MQ=255) tttATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCa > 1:646193/1‑149 (MQ=255) tttCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACACTGGTAATGAAAAAAAGACAAAACACGAGGAAAGGCGCAATAGCCAGttat > 2:911891/1‑149 (MQ=255) cAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACGTGTAT‑TGAGGTTTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCAAGTTATTAGaa > 1:695114/1‑149 (MQ=255) cAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGaa < 1:374359/149‑1 (MQ=255) cAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGaa > 2:931951/1‑149 (MQ=255) cAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCAATTGCATAAAAGTGGT‑ATGAAAAAAAGACAAAACACGAGGTAAGGGGCAATAGCCAGTTATTAGaa > 1:694702/1‑149 (MQ=255) cAGAAGGCCGGATTTTCCGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATGTTGCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGaa < 1:310009/149‑1 (MQ=255) agtccGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTaa < 2:952800/146‑1 (MQ=255) aGGCCGCAGTTTGTGGTTCCATGTCG‑CC‑A‑ATAAAGATAACTACTATTTTTTTAATTTTGCAGTACCATATTGTTCCTCCCATTCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTaa < 2:318451/149‑1 (MQ=255) ggCCGGATTTTCTTGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAg < 1:683867/149‑1 (MQ=255) ggCCGGATTTTCTGGTTTCCAGTCGCCA‑A‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAg < 1:176930/149‑1 (MQ=255) cGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATCTTTTTCGTCAAATGGGT‑ACATTGGTAATGAAAAAAAGACAAAACAGGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGAt > 1:1402052/1‑149 (MQ=255) cGGATTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTAAGATATTGTTCCTCAAATGTAC‑AGAGTGGTAATGAAAAAAAGACAAAACACAAGGTAAGGCGCAATAGCCAGTTCTTAGAATTAAGGAt > 1:1401906/1‑149 (MQ=255) aTTTTTGGGTGTTCAGTCG‑CGAA‑A‑AAAAATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGaa < 2:91567/149‑1 (MQ=255) aTTTTCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGaa < 2:236580/149‑1 (MQ=255) tCTTGTTTCCAGTCG‑AGAA‑A‑AAACATAACGACTATTTTTCGCATTTTGCGGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTgg < 1:964677/149‑1 (MQ=255) tCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCACAATAGCCAGTTATTAGAATTAAGGATGAATTgg < 2:349579/149‑1 (MQ=255) tCTGGTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAAAACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTgg > 1:656778/1‑149 (MQ=255) ggTTTCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTg > 1:130984/1‑149 (MQ=255) ggTTTCCAGTCG‑CG‑AAA‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTg < 1:366864/149‑1 (MQ=255) tttCCAGTCG‑CGAA‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGaa < 1:1304167/149‑1 (MQ=255) tttCCAATCG‑CGAA‑A‑AAAGATAACGTCTAGTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑AAAATGGAAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGaa < 2:778488/149‑1 (MQ=255) | TTGAGATTAACGGTAACTGCGCTAAATAGCATCCAGACACAGAAGGCAAGAAGTAGACAACTGACTGATATCCAGAGATTTCTTCGAGCAATATGTTTTCCTTTATTTTCCCAGAAGGCCGGATTTTCTGGTTTCCAGTCG‑CG‑C‑A‑AAAGATAACGACTATTTTTCTCATTTTGCAGTGCCATATTGTTCCTCACATGCAC‑ACATTGGTAATGAAAAAAAGACAAAACACGAGGTAAGGCGCAATAGCCAGTTATTAGAATTAAGGATGAATTGGGTGAA > NC_000913_3_pae_tpiA/1543879‑1544157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |