| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 3,563,755 | T→C | 6.7% | intergenic (+237/+32) | glpD → / ← yzgL | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding/pseudogene, periplasmic solute binding protein homology |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 3,563,755 | 0 | T | C | 6.7% | 299.4 / 6.1 | 110 | intergenic (+237/+32) | glpD/yzgL | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding/pseudogene, periplasmic solute binding protein homology |
| Reads supporting (aligned to +/- strand): ref base T (49/53); new base C (4/4); total (53/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCAATAATACCGGCAAG > NC_000913_3_pae_tpiA/3563607‑3563900 | cTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAGGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCcatcat > 1:604088/1‑149 (MQ=255) tACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATa > 1:1248025/1‑149 (MQ=255) cggggTTTATGCAATATATGGAATTTGCAGGGTCTTGGAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTGTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATAcc < 2:194771/146‑1 (MQ=38) gTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATAccc < 2:466911/149‑1 (MQ=255) gTTTATGCAATATATTGAATTTGCAAAGTCTTGTAGGCCAGATAAGACGTTCACGTCTCATCCGGCATGAACAAAGCGCACTTTGTGGAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAATACCCCGCCATCATACCCacc > 2:837308/1‑147 (MQ=25) tttATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAGAATCTAACTTACTTTTTAATTCAAGGAATTACCGCAAAGCCCACGCCATCATACACAACg > 2:442798/1‑149 (MQ=255) tATGCAATATATTGAATTTTCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGGCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTa < 2:293086/149‑1 (MQ=255) aTGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTaa < 1:1280732/149‑1 (MQ=255) tGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAAGCTAACCTACTTTTTAATTCAGGGAATTACCGCAAACCCAACGACATCATACCCAACATaaa > 2:223928/1‑148 (MQ=37) cAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACaa > 1:1406828/1‑149 (MQ=255) atatatTGAATTTGCCTGGTCTTGTAAACCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCACCCCCAACGTAACaaaa > 2:576525/1‑149 (MQ=38) atatatTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCACACCCAACGTAACaaaa > 2:576580/1‑149 (MQ=255) atatatTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCACACCCAACGTAACaaaa > 2:103812/1‑149 (MQ=255) atatatTGAATTTGCATGGTATTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAAGCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACaaaa < 1:174994/149‑1 (MQ=255) atTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACGTTTGAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCa < 1:916698/149‑1 (MQ=255) ttGAATTTGCATGGTCTTGTAGGCCAGATAAGACGGTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAg < 1:754731/149‑1 (MQ=255) tggAATTTGCATGGTCTTGTATGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAg < 2:688851/147‑1 (MQ=255) tGATTTTGCATGGTCTTGTGGGCCAGATAAGAGGTTCACGTCGCAGCAGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAgg < 2:287616/149‑1 (MQ=39) gAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGc > 1:1316618/1‑149 (MQ=255) aTTTGCATGGTATTGTAGGCCAGATAAGACGTTCACGTCGCATGCGGCATGAACACAGCGCACTTTGTCAAAAATCTAACCGACTTTTGAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAGCTCAGGCAc > 1:814281/1‑149 (MQ=255) ttggCATGGTCTTGTAGGCCAGATAAGACGTTAACGTCGCATCCGGCATGAACAAAGCGCACTTTGTAAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGGAAAGCCCACCACACGATATCAAACGTAACAAAACTCAGGccga > 2:813958/4‑146 (MQ=37) cATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCACCATACCCAACGTACCAAAACCCAGGCAGGTTcc > 1:1159207/1‑149 (MQ=255) aTGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTccc < 1:166584/149‑1 (MQ=255) aTGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTccc > 1:1282390/1‑149 (MQ=255) ggTCTTGTAGGGTAGATAGGGCGCTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCa < 1:794435/149‑1 (MQ=39) ggTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCa < 2:1067180/149‑1 (MQ=255) aGATAAGACGTACACGTCGCATCCGGCATGAACAAAGAGCACTTTGTCAAAAATCTAACATACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGAACGCTCCCCACCCGCCCCggcag > 2:779514/1‑145 (MQ=255) aTAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGaaaa < 2:1275145/149‑1 (MQ=255) aaGACGTTCACGTCGCATCCGTCATGAAAAAAGCCCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAAt < 1:1235469/149‑1 (MQ=255) aaGACCGTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAAt < 1:1066297/149‑1 (MQ=255) aGACGTTCACGTCGCATCCGGCATGAACAATGCGCACTTTGTCAAAAATCCAACCTACTTTTTAATTCAGGGAATTACCGCAAAACCGACGCTAGCATACCCGCATTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATa < 1:1040828/149‑1 (MQ=255) aGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATa < 1:789054/149‑1 (MQ=255) aGACGTTCACGTCGCACCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAACTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATa < 2:1260375/149‑1 (MQ=255) aGACGGTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCACGCCCCCTTGGGACTTGTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATa < 1:41162/149‑1 (MQ=255) gACGTTCACGTCGCATCTGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAg < 2:650807/149‑1 (MQ=255) gACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAACTCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCCTCATACCCAACGTAACAAAACCCACACCCATACCCAACTCACCCCGAGACAAAAAg > 2:414707/1‑149 (MQ=255) aCGTTCACGTCGCATCCGGCATGAACAAAGTGCACTTTGTCAAAAATCTAACCTACTTTTTAGTTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAGAATCAGGCACGTTACCCACTCGCCCCGAGAAAAATAGc > 2:1268250/1‑149 (MQ=255) aCGTTCACGTCGCATCCGGCAAGAACACAGCGCACTTTGCCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGc < 1:1012217/149‑1 (MQ=255) cGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCa < 1:645270/149‑1 (MQ=255) cACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGCAAAATAGCATTaa < 2:171639/149‑1 (MQ=255) tCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATgcg > 1:1350492/1‑149 (MQ=255) gCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAGATTGGCCTTAATGCGcc > 1:61864/1‑149 (MQ=255) cATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACAGCAAAGCCAACGCCATAATACCCAACGTAACAACACTCAGGCACGTTCACCACTCGCCACGAGAAAAATCGCATTCATACGcca > 2:23511/1‑148 (MQ=255) aTCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCa > 2:951683/1‑149 (MQ=255) aTCCGGCATGAACAAAGCGAACAAAGTCAAAAATCTCCCGCACCTTATCTTGCATTTAATTACCGCAACGACCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCa < 1:1026282/149‑1 (MQ=255) tCCGGCATGAACAAAGCGCACTTTGTCAACAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAg > 1:945160/1‑149 (MQ=255) gCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGAGCCCAGCGcc > 1:43032/1‑149 (MQ=255) cATGAACAAGGCGCACTGTGTCAAAAATCCAACCTACTTTTTAATTCAGGGAATGACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCa < 1:173807/149‑1 (MQ=255) aTGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATAACCGCAAATCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACCCGCCCCGAGAAAAATAGCATTAATGAGCCCAGCGccgg > 1:702304/1‑147 (MQ=255) taaataaaGCCCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCACAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCTCACCAGCCCCGAGACGAAAAACAGTCATACGCCGAGCGCCAGc > 2:608058/6‑149 (MQ=255) tGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGc > 1:887652/1‑149 (MQ=255) gAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTATTTTATTGTATTACCGAAAAGCCCACGCCATCATACCCAACGTAACAAAACTTAGGCACGTTCCCCACTCGCCCCGAGAAAAATAACATTAATGCGCCAAGAGCCAGCa > 2:853265/1‑149 (MQ=255) gAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGccacca > 2:455148/1‑149 (MQ=255) gAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCa < 2:421711/149‑1 (MQ=255) aCAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATa > 1:63787/1‑149 (MQ=255) aCAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGAAAAGCCCACGCCATCATACCCAACAAAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAAACAAATAACATTAACGCGTCCAGAGCCATCATa > 2:521385/1‑149 (MQ=255) cAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATaa > 1:996069/1‑149 (MQ=255) cAAAGCGCACTTTGTCAAAAATCGAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATaa < 2:922620/149‑1 (MQ=255) aaaGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCTACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAACTCAAGCATaaa > 2:465855/1‑149 (MQ=255) aGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATaaaaa < 2:604088/149‑1 (MQ=255) gcACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACGCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCGGCATAAAAAttt > 1:514631/1‑149 (MQ=255) gcACTTTGTCAAAAATCTAACCAACTTTTTCATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAAttt > 1:733572/1‑149 (MQ=255) gcACTCTGTCATAAATCTACCCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGTCCGTTCCCTACTCGCCCCGAGAAAAATAGCATTAATGCGGCCAGCGCCAGCATAAAAAttt < 1:1019359/149‑1 (MQ=255) tttGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTCACTCGCCCAGCGCCAGCATAAAAATTTTGAg < 2:673014/149‑1 (MQ=255) tttGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCAAGCGCCAGCATAAAAGTTTTgcg > 2:1182559/1‑147 (MQ=255) tCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGCGAAAAATAGCATTAATGCGCCCAACGCCAGCATAAAAATTTTGagaaga > 2:52106/1‑149 (MQ=255) cAAAAATCCAACCTCCTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGaa < 1:442798/149‑1 (MQ=255) aTCTAACCTACTTTTTAATTCAGGGATTTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCAGTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTaa > 1:810039/1‑149 (MQ=255) cTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAt < 2:1406828/149‑1 (MQ=255) tAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCATGGCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAtt < 2:887066/149‑1 (MQ=255) aCCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAttgt > 1:276324/1‑149 (MQ=255) aCCTACTTTTTAATTCAGGGAATGACCGCAAAGCCCACGCCATCATACCCAACGGAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCAAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAttgt < 2:492264/149‑1 (MQ=255) ccTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAttgtt < 2:1282390/149‑1 (MQ=255) cTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAttgttg > 1:1309498/1‑149 (MQ=255) cTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAAttgttg > 1:1309488/1‑149 (MQ=255) aCTTTTTAATTCAGGTAATTACAGCAAAGCCCACCCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCACCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGc < 2:451287/149‑1 (MQ=255) aCTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGc < 2:1247237/149‑1 (MQ=255) tttttGATCCAGGGAATTACCGCAAAGCCCACGCCCTCATACCTAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGt < 2:694227/149‑1 (MQ=255) aaattAATTCAGGAAATTACCACAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACCCACCCCGAGAAAAATAGCATTAATGCGCCCAAAACCAACAAAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGt < 2:1316618/146‑1 (MQ=255) aaTTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATaa < 1:1192969/149‑1 (MQ=255) ttCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAggg > 1:855858/1‑149 (MQ=255) ggAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACACGCCCCGAGAAAAATAGCATTAATGCGCCCCGCGCCCGCATAAAAATTTTAAGCAGACGAAAAATTGTGGCCGTGATaaaggcaag > 2:409240/1‑142 (MQ=255) ttACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACaa > 1:500773/1‑149 (MQ=255) tACCGCACAGCCCACGCCATCACACCCGACGTAACAAAACTCACGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCGGCGCCAGCATAAAAATGTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACaac < 1:576525/149‑2 (MQ=255) tACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACaaa < 2:1005324/149‑1 (MQ=255) tACCGCAAAGCCCACGCCATCACACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACaaa < 1:576580/149‑1 (MQ=255) tACCGCAAAGCCCACGCCATCACACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACaaa < 1:103812/149‑1 (MQ=255) aaCCGCAAACCCCACGCCATCATACCCAACGTAACAAAACTCATGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCAAGCCCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACaaa < 2:365489/148‑1 (MQ=255) aCCTCAAAGCCCATGCCATCATACCAAACTTAACAAAACTCAGTCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGACCCGCGCCCGCCTGGACATGTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAAc < 2:599765/149‑1 (MQ=255) aCCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAAc < 1:223928/149‑1 (MQ=255) catcAAAGACCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCTAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTTGCGTGATAAGGATATTACAAACt < 1:875919/146‑1 (MQ=255) cGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACtt < 2:435807/149‑1 (MQ=255) agaGCCCACGCCCTCATACCCTATGTAACAAGACTCAGGCACGTTCCCCACTCGTCACGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCaa < 2:264841/147‑1 (MQ=255) aaaGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCaa < 2:1399439/149‑1 (MQ=255) gCCCACGCCATCATACTCAACGTAACCAAACCCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCaataa < 2:98805/149‑1 (MQ=255) aCGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCAATAATAcc > 1:654460/1‑149 (MQ=255) cGCCATCATACCCAACGTAACAAAACTCAGTCAAGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATAAACCCAGCGACAGCCTAAAAAATATGAGAAGAAGAAAAATTCTAGGCATGATAAAGAAATTCCAAACATCAATAATAACg > 2:274765/1‑149 (MQ=255) cGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATGCCGGTATTGCAAACCTCcatcagaacg > 1:324717/1‑142 (MQ=255) atcttACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCAATAATACCGGCaa < 2:1204916/149‑1 (MQ=255) tcatACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCAATAATACCGGCAAg > 1:1158493/1‑149 (MQ=255) | CTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAGCATTAATGCGCCCAGCGCCAGCATAAAAATTTTGAGCAGAAGGTAAATTGTTGGCGTGATAAGGATATTACAAACTTCAATAATACCGGCAAG > NC_000913_3_pae_tpiA/3563607‑3563900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |