Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3423758–3424234	3424566–3424239	6–809	21 [20]	[20] 23	[rrfD]–[rrlD]	[rrfD],[rrlD]

CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTC  >  NC_000913_3_pae_tpiA/3424505‑3424715                                                               |                                                                                                                                                     ctccGTTACTCTTTAGGAGGAGACCGCCCCGGTCAAACTACCCACCAAACACTGTCCGCAACGCGGATTAGGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTACAGGTCGGCTACCTGCGGACTAGCGTCCACAATTCTa                                                                >  1:88243/1‑149 (MQ=11)  tccGTTACTCTATACGAGGAGACCGCCCCACTCAAACTACCCACCACACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGCGTGGTATTTCAACGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                                               <  2:169212/149‑1 (MQ=11)           ctTTAGGCGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACTGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTGCCat                                                      <  2:705638/149‑2 (MQ=12)               aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTAt                                                  >  1:364266/1‑149 (MQ=32)                 gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                                >  2:836681/1‑149 (MQ=32)                 gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                                >  2:210680/1‑149 (MQ=32)                  aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt                                               >  1:207387/1‑149 (MQ=32)                   ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                                              <  1:210680/149‑1 (MQ=32)                    gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCCACCCGGATTACGGGGCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCATGGTCGGCTCAATGCGGACTGGACTCAACACCTCTAAGCGTCCCACCTATCCtgc                                             >  1:395917/1‑147 (MQ=11)                            cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTTCACACTTCTAAGCCTCCCACCTGTCCTACACATCAAg                                     <  2:207387/149‑1 (MQ=17)                                     aCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGACTCCCACCTATCCTACACATCAAAGCTCAATGt                            >  1:146757/1‑149 (MQ=17)                                      cTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt                           <  2:371888/149‑1 (MQ=32)                                          cccccaGATACTGTCCTCCACCCGGCTAACTGTTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGCTCGGCTCCATGCATATTGGTTTTCTAATTACTCAGCCTCCCCCCAGATCTACACATCAAGGCTCAATGTTCAgt                       <  2:506826/146‑1 (MQ=2)                                            accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACAGTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt                     >  1:273610/1‑149 (MQ=17)                                               aGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAATGGTGGTATTTCAAGATCGGCTCCATGCAGACTGGAGTCCACATGTCTCGGCCTCCCCCCTGTCCTACACATCAAGGCTCAATGTTCAGTGTCaa                  <  2:702707/149‑1 (MQ=11)                                                     tGTCCGCAGCCCGGATTACTGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCTGACTGGCGTCCACACTTCTAAGCCTCTCACCTATCCTACACATCCAGTCGCAATCTTCAGTGTCAAGCtata            >  2:784326/1‑149 (MQ=11)                                                     tGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCCTGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCcata            >  2:756258/1‑149 (MQ=17)                                                     tGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata            >  1:833253/1‑149 (MQ=32)                                                            aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAgg     <  2:756825/149‑1 (MQ=32)                                                             aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGt    <  2:364266/149‑1 (MQ=32)                                                               ccGGATTCCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAATCCTCCCACCTATCCTACACAGCAAGGCTCAATGTTCAGTATCACGGAATAGTAAAGGtac  >  2:145692/1‑147 (MQ=11)                                                               ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                                              >  1:326185/1‑105 (MQ=33)                                                               ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                                              <  2:326185/105‑1 (MQ=32)                                                               |                                                                                                                                                     CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTC  >  NC_000913_3_pae_tpiA/3424505‑3424715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑