New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 2084191 =69 (0.940)15 (0.220) 12/232 5.9 18.5% intergenic (+8/+35) sbcB/yeeD exodeoxyribonuclease I; exonuclease I/putative TusA family sulfurtransferase
?NC_000913_3_pae_tpiA 2084215 = 68 (1.000)intergenic (+32/+11) sbcB/yeeD exodeoxyribonuclease I; exonuclease I/putative TusA family sulfurtransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_tpiA/2084342‑2084191
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggaggACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC  >  NC_000913_3_pae_tpiA/2084215‑2084363
                                                                                                                                                                                                                                                                                                             
GATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA                                                                                                                                                         <  3:326105/150‑1
 ATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAG                                                                                                                                                        >  1:555789/1‑150
                                                    ATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTTCGCCGTACCAGCGGCGGAGGCCAATGTT                                                                                                                                               <  4:275409/108‑1
                                                    ATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTTCGCCGTACCAGCGGCGGAGGCCAATGTT                                                                                                                                               >  3:275409/1‑108
                                                                     CAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAG                                                                                                                                                        >  1:203849/1‑82
                                                                     CAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAG                                                                                                                                                        <  2:203849/82‑1
                                                                       GCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG                                                                                                                                                       >  1:9515/1‑81
                                                                       GCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG                                                                                                                                                       <  2:9515/81‑1
                                                                                    GCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTT                                                                     >  2:264385/1‑150
                                                                                                             AAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGC                                            <  1:264385/150‑1
                                                                                                                        AACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGC                                                                                                           >  2:232851/1‑76
                                                                                                                        AACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGC                                                                                                           <  1:232851/76‑1
                                                                                                                               TCCTCCGCCGTACCAGCGGCGGAGGCCAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCA                          >  2:368932/1‑150
                                                                                                                               TCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCA                          >  1:207353/1‑150
                                                                                                                                CCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCA                                        >  2:115168/1‑135
                                                                                                                                CCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCA                                        <  1:115168/135‑1
                                                                                                                                 CTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAAT                        >  1:766252/1‑150
                                                                                                                                 CTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCA                                        >  1:741243/1‑134
                                                                                                                                 CTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCA                                        <  2:741243/134‑1
                                                                                                                                  TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATC                       >  3:551169/1‑150
                                                                                                                                            CAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATC             <  2:766252/150‑1
                                                                                                                                               CGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACT          <  4:326105/150‑1
                                                                                                                                                   GGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACT      <  2:546367/150‑1
                                                                                                                                                       GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC  >  2:136058/1‑150
                                                                                                                                                       GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC  >  1:761744/1‑150
                                                                                                                                                                                                                                                                                                             
GATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_tpiA/2084342‑2084191
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggaggACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC  >  NC_000913_3_pae_tpiA/2084215‑2084363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.