| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | 2042464 = | 1 (0.020) | 56 (0.970) | 46/276 | 0.4 | 98.3% | coding (97/531 nt) | yodB | cytochrome b561 homolog |
| ? | NC_000913_3_pae_tpiA | = 2102942 | NA (NA) | intergenic (‑31/+2) | insH1/wbbL | IS5 transposase and trans‑activator/pseudogene, lipopolysaccharide biosynthesis protein | |||||
Only 100 of 120 total aligned reads displayed.
ATTTTTAAGGTTCGTGGGATAGCTTGACTGTGAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCAAATGAA > NC_000913_3_pae_tpiA/2042315‑2042612 | tgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc > 4:371042‑M1/150‑150 (MQ=255)tgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc < 2:138892‑M1/1‑1 (MQ=255)tgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc > 1:327090‑M1/150‑150 (MQ=255) tttAAGGTTCGTGGGATAGCTTGACTGTGAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTa > 1:308635/1‑150 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTaaa > 2:481031‑M1/145‑150 (MQ=255) aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGgt > 1:472446‑M1/142‑150 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGgtagtag > 2:352035‑M1/137‑150 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGgtagtag > 2:352021‑M1/137‑150 (MQ=255) gggATAGCTTGACTGTGAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAg < 3:105926‑M2/140‑2 (MQ=255) gggATAGCTTGACTGTGAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAg > 4:105926‑M2/1‑139 (MQ=255) ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTAc < 1:228187‑M1/17‑1 (MQ=255) atcttGACTGTGAAAATCACAAGAGCTACAAAGATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataag > 4:105872‑M2/3‑134 (MQ=255) ttGACTGTGAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcgg > 2:299833‑M2/1‑131 (MQ=255) ctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATctg > 2:236452‑M1/127‑150 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATctgctg < 1:215905‑M1/27‑1 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATctgctg < 3:99340‑M1/27‑1 (MQ=255) ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGAt > 2:588791‑M1/122‑150 (MQ=255) gAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattc > 1:255104‑M2/1‑123 (MQ=255) aaaaTCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattct < 4:64542‑M2/150‑29 (MQ=255) aaTCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttc < 2:59959‑M2/150‑31 (MQ=255) acacagGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctc > 2:358657‑M2/2‑118 (MQ=255) tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc < 4:68877‑M1/1‑1 (MQ=255) tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc > 3:68877‑M1/108‑108 (MQ=255) gAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctc < 2:361856‑M2/144‑33 (MQ=255) gAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctc > 1:361856‑M2/1‑112 (MQ=255) gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAAcaca > 2:33291‑M1/107‑147 (MQ=255) tACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCATACggcaggtgcgaataagcggggaaattcttctcggctgactca < 3:172767‑M2/150‑43 (MQ=255) aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc < 3:219561‑M1/1‑1 (MQ=255) aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcc > 4:219561‑M1/103‑103 (MQ=255) ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGc > 2:396957‑M1/101‑150 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCgg > 3:178410‑M1/99‑150 (MQ=255) aaaTGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat < 1:354533‑M2/150‑48 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgaaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCggg < 1:214927‑M1/53‑1 (MQ=255) aTGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt < 3:115240‑M2/150‑50 (MQ=255) gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGtat < 2:603702‑M1/56‑1 (MQ=255) aCCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt < 1:51116‑M2/150‑54 (MQ=255) gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTc < 3:255465‑M1/60‑1 (MQ=255) gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTc < 4:126064‑M1/60‑1 (MQ=255) aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGttt > 2:214927‑M1/87‑150 (MQ=255) tcAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggacagtcttctcggctgactcagtcatttcatttcttcatg < 2:267167‑M2/150‑62 (MQ=255) aaaaaCTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca > 4:85340‑M2/1‑87 (MQ=255) aaaaaCTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca < 3:85340‑M2/146‑60 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAAt > 3:106956‑M1/77‑150 (MQ=255) aaTTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat < 1:604720‑M2/150‑73 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGtttt < 1:437678‑M1/79‑1 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCa > 3:148179‑M1/70‑150 (MQ=255) atttaCATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 3:211962‑M2/150‑78 (MQ=255) tttaCATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc > 3:23424‑M2/1‑72 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACg < 1:13149‑M1/83‑1 (MQ=255) ttaCATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 1:53644‑M2/150‑80 (MQ=255) ttaCATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcctcatgtttgagccgattttttct < 4:83924‑M2/150‑80 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGc > 1:488863‑M1/67‑150 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGc < 4:42368‑M1/84‑1 (MQ=255) aCATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc < 3:232972‑M2/150‑82 (MQ=255) aCATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc < 1:47227‑M2/150‑82 (MQ=255) cATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 4:247846‑M2/1‑68 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTg < 4:17018‑M1/87‑1 (MQ=255) accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGa > 3:107428‑M1/63‑150 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGTTGATGCGAGAAACACATTACAATGCGGGTATATTTGTTTGGGTGTTAATGTTTTCACGCCTGAtt > 2:324415‑M1/61‑150 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATtat < 2:123866‑M1/92‑1 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATtata < 4:180974‑M1/93‑1 (MQ=255) cGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 2:308635‑M2/1‑58 (MQ=255) ctgctTTTCGTGGCAATAACCTATGCCGCGATGGAACCCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 4:331267‑M2/150‑95 (MQ=255) ttttCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 2:601109‑M2/1‑52 (MQ=255) tttCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca > 1:59959‑M2/1‑51 (MQ=255) tCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagt > 1:108139‑M2/1‑49 (MQ=255) ttGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta < 3:180113‑M2/150‑105 (MQ=255) gCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt > 1:226631‑M2/1‑44 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATc < 4:246962‑M1/112‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATc < 4:7240‑M1/112‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATc < 4:162249‑M1/112‑1 (MQ=255) aaTAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta < 2:132730‑M2/150‑109 (MQ=255) aaTAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta > 4:17602‑M2/1‑42 (MQ=255) aaTAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt < 1:517434‑M2/149‑108 (MQ=255) aaTAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt > 2:517434‑M2/1‑42 (MQ=255) tAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga < 3:77702‑M2/150‑111 (MQ=255) tAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga > 4:77702‑M2/1‑40 (MQ=255) aCCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc > 1:195273‑M2/1‑38 (MQ=255) aCCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc < 4:213489‑M2/150‑113 (MQ=255) gatctcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTAt > 2:577466‑M1/32‑150 (MQ=255) tcatatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATtgtg > 4:92327‑M1/28‑150 (MQ=255) cgcgATGGAACTCCGTGGCTGGTTTCCTAAggaaggtgcgaatcagcggggcaattcttctcggctgcctcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaattccttgaatcagcctatttagaccgtttcttc > 4:172767‑M2/1‑30 (MQ=255) atatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTgcc < 2:479920‑M1/125‑1 (MQ=255) atatcagggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTgcc < 3:83044‑M1/125‑1 (MQ=255) gggacttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTgccaccgcc < 3:280407‑M1/131‑1 (MQ=255) aaCTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 3:86004‑M2/120‑99 (MQ=255) aaCTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 4:86004‑M2/1‑22 (MQ=255) aCTCCGTGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcctcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa > 3:83924‑M2/1‑21 (MQ=255) ttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATaaaa < 3:13173‑M1/96‑1 (MQ=255) ttgttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATaaaa > 4:13173‑M1/15‑110 (MQ=255) ttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCAcctgcct > 3:7240‑M1/12‑150 (MQ=255) ttcgcaccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCAcctgcct > 1:165672‑M1/12‑150 (MQ=255) tGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 1:13352‑M2/1‑15 (MQ=255) tGGCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt < 2:13352‑M2/134‑120 (MQ=255) gCTGGTTTCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat < 1:306574‑M2/150‑138 (MQ=255) accttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCaa < 3:378866‑M1/144‑1 (MQ=255) ccttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCaaa > 3:17018‑M1/6‑150 (MQ=255) cttcCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCAAAt < 3:280938‑M1/146‑1 (MQ=255) ttCCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag > 1:132730‑M2/1‑7 (MQ=255) cCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCAAATGaa > 1:304985‑M1/2‑150 (MQ=255) | ATTTTTAAGGTTCGTGGGATAGCTTGACTGTGAAAATCACAGGAGCTACAAAAATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCAAATGAA > NC_000913_3_pae_tpiA/2042315‑2042612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |