| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 275149 | NA (NA) | 62 (1.070) | 42/278 | 0.6 | 96.9% | intergenic (‑32/‑176) | insH1/mmuP | IS5 transposase and trans‑activator/CP4‑6 prophage; putative S‑methylmethionine transporter |
| ? | NC_000913_3_pae_tpiA | = 344921 | 2 (0.030) | coding (746/816 nt) | yahL | uncharacterized protein | |||||
Only 100 of 129 total aligned reads displayed.
CCCATTAAGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCGCAATGCAGGTAATCATTTCATCTGTATA > NC_000913_3_pae_tpiA/344773‑345069 | aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 2:484187‑M2/5‑1 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATa < 1:85805‑M2/6‑1 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATa < 1:242614‑M2/6‑1 (MQ=255) ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATag > 2:32714‑M2/144‑150 (MQ=255) ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttactcgcaccttccCTAATag < 2:387118‑M2/7‑1 (MQ=255) aTTAAGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaa < 1:308043‑M2/150‑5 (MQ=255) ttAAGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaag > 1:454241‑M2/1‑145 (MQ=255) aGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtg < 2:595572‑M2/150‑9 (MQ=255) aGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtg < 1:206379‑M2/150‑9 (MQ=255) cAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcg > 1:181120‑M2/1‑140 (MQ=255) gcTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaa > 4:116202‑M2/1‑135 (MQ=255) gcTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaa > 2:87285‑M2/1‑135 (MQ=255) cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTa > 2:416962‑M2/131‑150 (MQ=255) ttGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagt < 4:282423‑M2/150‑18 (MQ=255) tGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtc < 2:438248‑M2/150‑19 (MQ=255) cATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctg > 2:348656‑M2/1‑128 (MQ=255) ttattattaCACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatga > 1:249262‑M2/1‑122 (MQ=255) acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATc < 2:127052‑M2/36‑1 (MQ=255) aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACAGGAtaatatctgtcac > 1:140427‑M2/108‑144 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATc > 2:84306‑M2/107‑142 (MQ=255) aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAg < 3:299467‑M2/47‑1 (MQ=255) ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGc < 4:252766‑M2/48‑1 (MQ=255) ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGc < 2:344638‑M2/48‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCa > 2:225730‑M2/102‑150 (MQ=255) aaaTATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:438248‑M2/1‑105 (MQ=255) aaTATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg > 1:117948‑M2/1‑104 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACg > 3:335136‑M2/100‑150 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACg > 1:198766‑M2/100‑150 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgaacctgccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACg > 3:182975‑M2/100‑150 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGt > 1:3084‑M2/99‑150 (MQ=255) tCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgcacaagtccctgatatgagatcatgtttgtcatctggagc < 3:6114‑M2/150‑51 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttgcCGAATAGATTGCAGGGAGTAGGTGGCA‑GATACTATCCTGTAAATAAGCAGGTTaaaa > 1:593373‑M2/94‑150 (MQ=255) tGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 4:51363‑M2/150‑58 (MQ=255) tttCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 3:86266‑M2/1‑89 (MQ=255) ttCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:446726‑M2/1‑88 (MQ=255) ccTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcga < 1:227153‑M2/97‑12 (MQ=255) ccTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcga > 2:227153‑M2/1‑86 (MQ=255) ccTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcga > 2:227284‑M2/1‑86 (MQ=255) cTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca < 4:341560‑M2/144‑60 (MQ=255) cTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 3:341560‑M2/1‑85 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACActct > 2:268482‑M2/81‑150 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGc > 1:231675‑M2/79‑140 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 2:30764‑M2/4‑1 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:30764‑M2/77‑80 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAg > 3:77021‑M2/77‑150 (MQ=255) gTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca > 2:206379‑M2/1‑74 (MQ=255) gTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAggg > 1:602413/1‑150 (MQ=255) tATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 1:595572‑M2/1‑67 (MQ=255) tGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTaa > 1:112611/1‑64 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCa > 3:274362‑M2/61‑150 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCAc > 3:270360‑M2/60‑150 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCAcc > 2:10590‑M2/59‑150 (MQ=255) ctctctGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 1:101370‑M2/1‑62 (MQ=255) ctctctGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt < 1:177211‑M2/150‑89 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCt > 1:71018‑M2/58‑150 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGc > 3:11487‑M2/56‑150 (MQ=255) ctGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 2:308043‑M2/1‑58 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAgtt < 2:3084‑M2/100‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAgtt < 4:230084‑M2/100‑1 (MQ=255) aatgactgagtcagccgagaagaattgccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAgttgt < 2:593373‑M2/102‑1 (MQ=255) gACGTAAAAACATACAGAGATGATGNGCGATTAAATGANTGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga < 1:377868‑M2/150‑101 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTAtt < 2:144023‑M2/106‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTAtt > 2:588244‑M2/45‑150 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTCAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTAtt < 2:144049‑M2/106‑1 (MQ=255) gTAAAAACACACAGACAGGATGCGCGATTAAAGCAATGGATATCTAAggaaggtgcgaccaagtccctgatatgagatcatgtttgtcatctcgatccatagaacagagttcatcatgagtcatcaacttaccttcgccgccagtgaatt < 4:59694‑M2/150‑104 (MQ=255) tAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc > 4:340784‑M2/1‑46 (MQ=255) tAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc > 3:10838‑M2/1‑46 (MQ=255) gagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTTCACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCa < 2:276601‑M2/109‑1 (MQ=255) aaaaCATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 3:187498‑M2/1‑44 (MQ=255) aaaCATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 3:51363‑M2/1‑43 (MQ=255) aaaCATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 1:90175‑M2/1‑43 (MQ=255) aaCATACAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagctcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca > 4:106009‑M2/1‑42 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTga < 2:371736‑M2/114‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTcc > 1:382642‑M2/35‑123 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTcc < 2:382642‑M2/89‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTgaga < 1:225730‑M2/116‑1 (MQ=255) cAGAGATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc > 2:177211‑M2/1‑36 (MQ=255) agagATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg < 1:31530‑M2/150‑116 (MQ=255) agagATGATGCGCGATTAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 4:66443‑M2/1‑35 (MQ=255) aagaatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGaa < 2:240095‑M2/121‑1 (MQ=255) aatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCg < 4:274362‑M2/124‑1 (MQ=255) aatttccccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCg < 1:544384‑M2/124‑1 (MQ=255) cccgcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCGCAATGc < 4:77021‑M2/130‑1 (MQ=255) ggcttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGGGGGTTAATCGCAATGCAg < 2:71288‑M2/132‑1 (MQ=255) ttAAATGAATGGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 3:51457‑M2/126‑107 (MQ=255) ttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCGCAATGCAGGTa > 4:191723‑M2/16‑150 (MQ=255) ttattcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCGCAATGCAGGTa > 2:16473‑M2/16‑150 (MQ=255) tcgcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCGCAATGCAGGTAATCa > 1:551251‑M2/12‑150 (MQ=255) gaatgGATATCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat < 4:389441‑M2/150‑137 (MQ=255) gcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCtt < 1:177677‑M2/71‑1 (MQ=255) gcaccttccCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCtt > 2:177677‑M2/10‑80 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc < 1:397900‑M2/150‑147 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg > 3:362681‑M2/1‑4 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 1:552410‑M2/1‑2 (MQ=255) aggaaggtgcgaacaagtctctgatatgggatcatgtttggcatctggagccatcgaacagggttgatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaggttttcttgtcccgc < 2:257913‑M2/150‑150 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcccacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc < 2:531434‑M2/150‑150 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:520780‑M2/92‑92 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 2:520780‑M2/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc < 4:375314‑M2/69‑69 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc > 3:375314‑M2/1‑1 (MQ=255) | CCCATTAAGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAATAGAGTGCAGGAATTAGGTGACA‑GATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAGTTCAGAAAGGGTTCCACCTGCAAGTTGTTATTCCACCTGAGAGTGAATCGCAATGCAGGTAATCATTTCATCTGTATA > NC_000913_3_pae_tpiA/344773‑345069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |