New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 4549702	NA (NA)	4 (0.060)	4/268	9.1	NA	noncoding (4/36 nt)	REP345 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP345 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913_3_pae_tpiA	= 4549734	NA (NA)					noncoding (36/36 nt)	REP345 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP345 (repetitive extragenic palindromic) element; contains 1 REP sequences
Rejected: Coverage evenness skew score above cutoff.

ACGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTG  >  NC_000913_3_pae_tpiA/4549557‑4549850                                                                                                                                                  |                                                                                                                                                     aCGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGcc                                                                                                                                                   >  2:187589/1‑149 (MQ=255) aCGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGcc                                                                                                                                                   >  2:219598/1‑149 (MQ=255) aCGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCT‑AAAACCTGCACGTTAGCCCTTTGTAGGCCa                                                                                                                                                  >  2:254785/1‑149 (MQ=255)  cGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTGGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCa                                                                                                                                                  <  1:178001/149‑1 (MQ=255)       cGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATaa                                                                                                                                             <  1:322229/149‑1 (MQ=255)         gAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGa                                                                                                                                           <  1:93128/149‑1 (MQ=255)               aGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTc                                                                                                                                     >  1:469558/1‑149 (MQ=255)               aGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATAATACCTGAAGCTAAAAACCTGCACGGTAGCCCTTTGTAGTCCACATAACACGCCTc                                                                                                                                     >  2:80009/1‑149 (MQ=255)                    aCTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGt                                                                                                                                >  2:962831/1‑149 (MQ=255)                     cTGCAGGGAATGGGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAACACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTc                                                                                                                               <  2:329852/149‑1 (MQ=255)                        cAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCa                                                                                                                            >  2:923707/1‑149 (MQ=255)                        cAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCa                                                                                                                            >  2:933230/1‑149 (MQ=255)                          gggAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATc                                                                                                                          >  1:1099113/1‑149 (MQ=255)                               tgtgCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCa                                                                                                                     <  1:121131/149‑1 (MQ=255)                                 tgCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATa                                                                                                                   >  1:697358/1‑149 (MQ=255)                                   cAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTGAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATaaa                                                                                                                 >  1:980876/1‑149 (MQ=255)                                    aaTCGATTATTGGCGTGACTTTTGTTTATCAATAAACGTTGCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATaacc                                                                                                                >  1:820438/1‑147 (MQ=39)                                      tCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACaa                                                                                                              >  1:775147/1‑149 (MQ=255)                                      tCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACaa                                                                                                              >  1:775106/1‑149 (MQ=255)                                        gATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCAAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAg                                                                                                            >  1:563550/1‑149 (MQ=255)                                            tttGGCGTGACTTTTGTTTCTCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAgcgcc                                                                                                        >  1:918047/2‑148 (MQ=255)                                             ttGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCAc                                                                                                       <  1:473070/149‑1 (MQ=255)                                                gCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACttt                                                                                                    <  1:851975/149‑1 (MQ=255)                                                  gTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGc                                                                                                  >  1:618626/1‑149 (MQ=255)                                                   tGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATCACACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCt                                                                                                 >  2:1090371/1‑149 (MQ=255)                                                   tGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCt                                                                                                 >  1:894419/1‑149 (MQ=255)                                                       ttttGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCACTATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCGGGCATAAACAAAGCGCACTTTGCTGGTc                                                                                             >  1:939631/1‑149 (MQ=255)                                                       ttttGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTc                                                                                             >  2:73382/1‑149 (MQ=255)                                                       ttttGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTc                                                                                             >  1:169400/1‑149 (MQ=255)                                                        tttGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCt                                                                                            <  1:765865/149‑1 (MQ=255)                                                           gTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGtt                                                                                         >  1:723966/1‑149 (MQ=255)                                                            tttATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTc                                                                                        >  2:168169/1‑149 (MQ=255)                                                              tATCCACAAAGAAATCACAGGATAATGCCAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTccc                                                                                      <  1:1078880/149‑1 (MQ=39)                                                                 cAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATAGTAACTGAAGCTCAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTAGCATCTGGAATAAACAAAGAGCACTTTGCTGGCCTGTTCCACTc                                                                                   >  2:870926/1‑149 (MQ=37)                                                                  aaTAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCa                                                                                  >  1:1065764/1‑149 (MQ=255)                                                                   aTAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCAc                                                                                 <  2:169400/149‑1 (MQ=255)                                                                    tAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCGGTTCCCCTCAcc                                                                                >  1:410465/1‑149 (MQ=255)                                                                      aaGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACCAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCt                                                                              >  1:77559/1‑149 (MQ=255)                                                                      aaGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCCCTTTGCTGGTCTGTTCCCCTCACCCt                                                                              >  2:1068897/1‑149 (MQ=255)                                                                      aaGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCt                                                                              >  1:103523/1‑149 (MQ=255)                                                                       aGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTa                                                                             >  1:392077/1‑149 (MQ=255)                                                                        gAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGCCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTaa                                                                            >  2:433241/1‑149 (MQ=255)                                                                               caGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCtctc                                                                     >  2:150334/1‑149 (MQ=255)                                                                                  gACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTcccc                                                                  >  1:945927/1‑149 (MQ=255)                                                                                    cATTGCTAATGCTGGTACGCAATATTACCTGCAGCTCAAAACCTGCACGTCAGCCCTTTGTCGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCgg                                                                <  1:700369/149‑1 (MQ=255)                                                                                     aTTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGa                                                               <  1:168169/149‑1 (MQ=255)                                                                                      ttGCTAATGCTGGTACGCAATATTACCTGAAGCTCCGAAGGTGGACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAg                                                              >  1:821012/1‑149 (MQ=39)                                                                                      ttGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGGCCGCGTCGCATCTGGCATACACAAAGCGCACTTTGCTGGTCTGTTCCCCTCCCCCTAACCCTCTCCCCGGAg                                                              <  2:106291/149‑1 (MQ=255)                                                                                      tcgCTGATGCGGGGACGCATTATGACCTGAAGCTAAAAACCGGAACGGTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCTTCTCATCTGGCAGAAACAAAGCGCACTGGGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAg                                                              <  2:786439/147‑1 (MQ=255)                                                                                       tGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAgg                                                             >  1:610950/1‑149 (MQ=255)                                                                                       tGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAgg                                                             <  1:150334/149‑1 (MQ=255)                                                                                        gCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTAACCCTAACCCTCTCCCCGGAggg                                                            >  1:794380/1‑149 (MQ=255)                                                                                            aTGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGa                                                        <  2:395240/149‑1 (MQ=255)                                                                                             tGCTGGTACGCAATATTACCTGAAGCTAAACACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAg                                                       <  1:421610/149‑1 (MQ=255)                                                                                              gcgggTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAgg                                                      <  2:469558/146‑1 (MQ=255)                                                                                              gCTGGTACGCAATATTACGTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGAGGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAgg                                                      <  2:887617/149‑1 (MQ=255)                                                                                              gCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAgg                                                      <  1:962831/149‑1 (MQ=255)                                                                                               cTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAggg                                                     <  2:812714/149‑1 (MQ=255)                                                                                                  gTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGAc                                                  >  1:500425/1‑149 (MQ=255)                                                                                                      gCAACATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTc                                              >  2:691118/1‑149 (MQ=255)                                                                                                       cAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGGGCACTTACCCCGGATTTGCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGGGGGGACTGTcc                                             >  1:210247/1‑149 (MQ=25)                                                                                                       cAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGCGGGGCGCGGGGACTGTcc                                             >  2:577530/1‑149 (MQ=255)                                                                                                       cAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTcc                                             >  1:704963/1‑149 (MQ=255)                                                                                                        aaTATTACCTGAAGCTAAAGACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCATCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTccc                                            <  1:1049055/149‑2 (MQ=255)                                                                                                        aaTATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAAcc                                                                          <  1:526803/119‑1 (MQ=255)                                                                                                        aaTATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAAcc                                                                          >  2:526803/1‑119 (MQ=255)                                                                                                         atatTACCTGGAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCgg                                           <  2:943118/149‑1 (MQ=255)                                                                                                            ttACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGACTCTGGCATCTACATAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCATCTCCCCGGAGGGGCGAGGGGACTGTCCGGGca                                        >  2:306/1‑149 (MQ=38)                                                                                                               ccTGAAACTAAAAACCTGCACGTTAGCCCTTTGCAGGCCAGATAAGACGCGTCAGCAACGCATCTGACATAAACAAAGCACACTTTGCTGGTCTGTTCCCCTCACACTAACCCTCTCACCGGAGGGCACGGGGGACTACGCGGGCACAt                                     >  2:648183/1‑149 (MQ=25)                                                                                                                cTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCtctc                                                                     >  2:1013036/1‑116 (MQ=255)                                                                                                                cTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCtctc                                                                     <  1:1013036/116‑1 (MQ=255)                                                                                                                cTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGCGGGGCCTGTCCGGGCCCAtt                                    >  2:935898/1‑149 (MQ=255)                                                                                                                cTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACAtt                                    >  1:6148/1‑149 (MQ=255)                                                                                                                  gacgCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGAGAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACAtttt                                  <  1:199781/146‑1 (MQ=255)                                                                                                                       tAAAAACCTGCACGTTAGCCCTTTGTAGGCCGGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGAc                             >  1:611060/1‑149 (MQ=255)                                                                                                                       tAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGAc                             >  1:407260/1‑149 (MQ=255)                                                                                                                       tAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGAc                             <  1:91258/149‑1 (MQ=255)                                                                                                                          aaaCCTGGAGGTTAGCGCTTTGTAGGCCAGATAAGACGCGTCAGTGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCGCCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          <  2:988460/149‑1 (MQ=39)                                                                                                                          aaaCCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTGAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          <  2:731906/149‑1 (MQ=255)                                                                                                                          aaaCCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTACGTCTGACCTCCGATGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          >  1:363718/1‑149 (MQ=37)                                                                                                                          aaaCCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          >  1:251363/1‑149 (MQ=255)                                                                                                                          aaaCCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          <  2:610950/149‑1 (MQ=255)                                                                                                                          aaaCCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          <  2:1099113/149‑1 (MQ=255)                                                                                                                          aaaCCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACttt                          >  1:69606/1‑149 (MQ=255)                                                                                                                              cTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGtca                      >  1:486148/1‑149 (MQ=255)                                                                                                                               tGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGtcat                     >  1:274768/1‑149 (MQ=255)                                                                                                                                   cGTTAGCCCTTTGTAGGCCAGAGAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGt                 <  2:939631/149‑1 (MQ=255)                                                                                                                                    gTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTGGAATCTGGCATAAACAAAGCGCAATTTGCTGGTCTGTTCACCTCACCCTACCCCTCTCCCCGGGGGGGCGAGGGGACTGTCCGGGCACATTTTTGAACTTTGTCGTCGGTc                >  2:925678/1‑149 (MQ=38)                                                                                                                                     ttAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCAcc                                                                                <  1:198839/84‑1 (MQ=255)                                                                                                                                     ttAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCAcc                                                                                >  2:198839/1‑84 (MQ=255)                                                                                                                                         cccTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGc           >  1:833411/1‑149 (MQ=255)                                                                                                                                           cTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCt         <  1:18314/149‑1 (MQ=255)                                                                                                                                           cTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCt         >  1:858380/1‑149 (MQ=255)                                                                                                                                                  ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTTCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTg  >  2:934426/1‑149 (MQ=255)                                                                                                                                                  ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTg  <  1:254785/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     ACGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAAAGAAATCACAGGACATTGCTAATGCTGGTACGCAATATTACCTGAAGCTAAAAACCTGCACGTTAGCCCTTTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATAAACAAAGCGCACTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTG  >  NC_000913_3_pae_tpiA/4549557‑4549850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.