New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	349605 =	NA (NA)	5 (0.080)	5/268	8.5	NA	noncoding (1/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
	?	NC_000913_3_pae_tpiA	349637 =	NA (NA)					noncoding (33/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
Rejected: Coverage evenness skew score above cutoff.

GCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACA  >  NC_000913_3_pae_tpiA/349490‑349784                                                                                                                                                    |                                                                                                                                                    gCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCt                                                                                                                                                    >  2:354853/1‑149 (MQ=255)  cAACGAGCTGTACGAAAGCATCAACTCATACCAATAAGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTa                                                                                                                                                   <  1:1032302/149‑1 (MQ=255)        gCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGt                                                                                                                                             <  1:8962/149‑1 (MQ=255)        gCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCAGGTGCCTGATTGTTCGCTGACGCGCCTTATCAGGCCTACggggg                                                                                                                                             >  1:305409/1‑148 (MQ=255)         cTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTCATTACGTGGAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTg                                                                                                                                            <  1:1085542/149‑1 (MQ=38)           gTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCa                                                                                                                                          >  2:832100/1‑149 (MQ=255)            tACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCAc                                                                                                                                         >  1:313925/1‑149 (MQ=255)            tACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAAAGGCCTGTGATTGTATTCAACTTCGTAGGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTCCGAgggggac                                                                                                                                         >  1:209958/1‑144 (MQ=255)            caCGATAGGATCAACTACGACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCAc                                                                                                                                         <  2:167969/148‑1 (MQ=255)                aaaGCATTAACTACATCCAGTACGAATAGAAGCTCGACAACCTTTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACCGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                                                                     <  2:118259/149‑1 (MQ=38)                aaaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                                                                     <  1:1041724/149‑1 (MQ=255)                 aaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGc                                                                                                                                           >  1:893612/1‑142 (MQ=255)                 aaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGc                                                                                                                                           <  2:893612/142‑1 (MQ=255)                    cATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                                 >  2:736769/1‑149 (MQ=255)                     aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATGAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                                                                >  2:964086/1‑149 (MQ=255)                      tCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                                                                               >  1:496138/1‑149 (MQ=255)                         actactactAGTACAAAGACAAGCTCGACAACCTGTTTGCCCCTAGCCAGGTGAAATAAAAATCTCCCGTTGATTGTATTCGACAGCCTATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGCACTGTAGGTc                                                                                                                            <  2:480004/149‑1 (MQ=37)                          ctgagacCGGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                                                           <  2:827728/144‑1 (MQ=255)                          ctactaCCAGTACGAATAGAAGCTCCAAAACCTTCTTGCCCGTAGCCAAGTCAAAGAAAAATCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                                                           <  2:731873/149‑1 (MQ=25)                           gattgtcAGTATGAAGGGAAGCTCTACAGCCTGTGTGCCCGTACTCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                                                                          <  2:111215/143‑1 (MQ=25)                             ctcacAGTACGGAGAGAAGCTCGACAACCTGTTTGGCCGTAGCCAGGTGAAATAAAAAGCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                                                                        <  2:1013670/145‑1 (MQ=255)                             ctacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCggct                                                                                                                        >  1:228417/1‑147 (MQ=255)                             ctacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                                                                        >  1:17871/1‑149 (MQ=255)                              tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                                                                       >  1:219579/1‑149 (MQ=255)                              tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                                                                       >  1:219272/1‑149 (MQ=255)                               acCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATaa                                                                                                                      <  1:895357/149‑1 (MQ=255)                                ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGGCACCGACGCGACTTCTCCGGCATACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                                                     >  1:701982/1‑149 (MQ=38)                                 cAGTACGAAGAGAAGCTCGACAACCGGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGa                                                                                                                    <  2:49226/149‑1 (MQ=255)                                  aGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAc                                                                                                                   >  2:991770/1‑149 (MQ=255)                                  aGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAc                                                                                                                   >  1:869189/1‑149 (MQ=255)                                  aGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAc                                                                                                                   >  1:271222/1‑149 (MQ=255)                                   gTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCCCTGAACTGTAGGTCGGATAAGACg                                                                                                                  >  2:417395/1‑149 (MQ=255)                                    tACGAAGAGAAGCTCGCCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACgg                                                                                                                 >  1:991030/1‑149 (MQ=255)                                         agagAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGc                                                                                                            <  1:68278/149‑1 (MQ=255)                                            gaAGCTGGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTc                                                                                                         <  1:398217/149‑1 (MQ=255)                                             aaGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCg                                                                                                        >  2:720110/1‑149 (MQ=255)                                                cacGACAACCTGTTTGCCCGTCGCCAGGTGAAATAAAAAACGCCCGTTGCTTGAATTCGACAGCCGATGCCGGATGCGTCGCTTACGCGACCTCGCAGGCCTGCAAGGAGCACTCAACCCGAGGTCCGATAACGCGGGAGGCGTCGCAt                                                                                                     >  2:236605/3‑149 (MQ=255)                                                cTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGCTGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTCGGTCGCATAAGACGGATGGCGTTGCAt                                                                                                     >  2:254754/1‑149 (MQ=255)                                                   gACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCGGGCCTACGAGGTGCa                                                                                                                                          <  1:1056561/109‑1 (MQ=255)                                                   gACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCGGGCCTACGAGGTGCa                                                                                                                                          >  2:1056561/1‑109 (MQ=255)                                                   gACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCg                                                                                                  >  2:838801/1‑149 (MQ=255)                                                    aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCGTCCGa                                                                                                 >  1:908319/1‑149 (MQ=255)                                                    aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                                                                 >  1:754526/1‑149 (MQ=255)                                                      aaCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACa                                                                                               >  2:845874/1‑149 (MQ=255)                                                        ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAc                                                                                             >  2:879906/1‑149 (MQ=255)                                                         cTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTc                                                                                                                            >  2:434319/1‑117 (MQ=255)                                                         cTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTc                                                                                                                            <  1:434319/117‑1 (MQ=255)                                                           ttgtggccGGAGCCAGGTGAAATAAAAAACGCCCGGTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGa                                                                                          <  2:502070/143‑1 (MQ=255)                                                              tGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                                                       <  1:1096974/149‑1 (MQ=255)                                                                 ccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                                                                     >  1:848169/1‑100 (MQ=255)                                                                 ccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                                                                     <  2:848169/100‑1 (MQ=255)                                                                 ccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTg                                                                                    >  1:33343/1‑149 (MQ=255)                                                                  cGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGa                                                                                   <  1:118144/149‑1 (MQ=255)                                                                     aggcAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgc                                                                                <  1:58425/146‑1 (MQ=255)                                                                      gCCAGGTGAAATAAAAACCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                                                                               <  1:853067/149‑1 (MQ=255)                                                                        cAGGTGAAATAAAGAGCGCCCGGTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgcc                                                                             <  1:836309/149‑1 (MQ=255)                                                                           gTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGAATTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCt                                                                          >  1:973162/1‑149 (MQ=255)                                                                            tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAg                                                                                                                                               <  1:708761/79‑1 (MQ=255)                                                                            tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAg                                                                                                                                               >  2:708761/1‑79 (MQ=255)                                                                                  aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGa                                                                   <  1:720110/149‑1 (MQ=255)                                                                                            cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGGCTTATCAGGc                                                         >  1:735400/1‑149 (MQ=255)                                                                                            cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                                                  >  1:128371/1‑140 (MQ=255)                                                                                            cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                                                  <  2:128371/140‑1 (MQ=255)                                                                                            cGTTGATGGGATTGGTCAGCTGATGCCTAATGCGTCGCTGACGCGACTGAGCAGGCCTACGATGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGGCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGc                                                         <  2:849217/149‑1 (MQ=14)                                                                                             gTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGGCGGATGGCGTCGCAGCCGACAACCGATACCTGATGGGCCGCTGACGTGACTTATCAGAcc                                                        >  1:193759/1‑149 (MQ=17)                                                                                             gTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc                                                        >  2:14278/1‑149 (MQ=255)                                                                                             gTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc                                                        <  2:219579/149‑1 (MQ=255)                                                                                             gTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc                                                        <  2:219272/149‑1 (MQ=255)                                                                                                 aTTGTATTCGACAGCCGATGCCGTATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACg                                                    <  1:512164/149‑1 (MQ=255)                                                                                                    ggatgcGACAGCCGATGCATGATGCGTCGCTGACGAGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACgggg                                                 <  2:527529/144‑1 (MQ=255)                                                                                                      aTTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTGCGGGGTg                                               >  2:593773/1‑149 (MQ=255)                                                                                                       ttCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAc                                                                                             <  1:499618/102‑1 (MQ=255)                                                                                                       ttCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAc                                                                                             >  2:499618/1‑102 (MQ=255)                                                                                                             aGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa                                        <  1:14278/149‑1 (MQ=255)                                                                                                             aGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa                                        <  2:754526/149‑1 (MQ=255)                                                                                                              gCCGATGCCTGACGCGTCGCCGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAc                                       <  1:22267/149‑1 (MQ=255)                                                                                                              gCCGATGCCGGAGGCGTCGCGGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAc                                       <  2:496138/149‑1 (MQ=255)                                                                                                              gCCGACGCCTGATGCGTCGCTGACGCGTTTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAc                                       <  1:417395/149‑1 (MQ=255)                                                                                                                  aTGCCTGATGCGTCGCTGACGCGACTTACCAGGCGTACGAGGTGCACCGAACTGTAGGTCGGAGAAGACGGATGGCGTCGGATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTa                                   <  1:949629/149‑1 (MQ=14)                                                                                                                   tggcTGATGCGGCGCTGACGGGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAg                                  <  1:60181/146‑1 (MQ=255)                                                                                                                      cTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTc                               <  2:33343/149‑1 (MQ=255)                                                                                                                       tGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCg                              >  2:700452/1‑149 (MQ=255)                                                                                                                             gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCTATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGATCGGATAAg                        >  2:954534/1‑149 (MQ=255)                                                                                                                             gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTTATGCGCCGCTGACGTGACTTATCAGGCCTGCGGGGCGCACTGAACTGTAGGTCGGATAAg                        >  2:817918/1‑149 (MQ=255)                                                                                                                             gTCGCTGACGCGACTTATCAGGCCTACACGGTGCAGTAAACAGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGAGCAGATGACGTGACTTCTCAGGCCTACGGGGGGCACTGAACTGTGGGTCGGATAAg                        >  1:266708/1‑149 (MQ=14)                                                                                                                              tCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGa                       <  2:17871/149‑1 (MQ=255)                                                                                                                               cGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCTTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGACCTGTAGGTCGGATAAGAc                      <  1:991770/149‑1 (MQ=255)                                                                                                                                    aatggtcTTATTAGGGCTATGATGTTCACTGAACTGTAGGTTGGATAAGACGGATGGCGTTGTATTCGATAACCGATGCCTGATGCGTTGCTGACGTGACTTATCAGGTCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATa                 <  2:598067/143‑1 (MQ=14)                                                                                                                                        gACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGt             >  1:151572/1‑149 (MQ=40)                                                                                                                                              tCAGGCCTACGAGGTGCACTGAACTGTAGGTTGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATc       <  2:257477/149‑1 (MQ=255)                                                                                                                                                 ggCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGa    >  2:299943/1‑149 (MQ=39)                                                                                                                                                   ccTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGAGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACa  >  1:668199/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACA  >  NC_000913_3_pae_tpiA/349490‑349784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.