New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 3140200	75 (1.140)	4 (0.070)	4/262	9.0	5.5%	coding (119/342 nt)	hybF	protein involved with the maturation of hydrogenases 1 and 2
	?	NC_000913_3_pae_tpiA	= 3140206	67 (1.100)					coding (113/342 nt)	hybF	protein involved with the maturation of hydrogenases 1 and 2
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGA  >  NC_000913_3_pae_tpiA/3140059‑3140353                                                                                                                                                    |                                                                                                                                                    gcATCGTGCTGATGAATCTCCACCACCTGGCTGCTATCCCAGCACCAAGCCTGGGCGGGTTTACAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCa                                                                                                                                                    <  1:983518/149‑1 (MQ=255)    tCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGga                                                                                                                                                 <  1:1018440/149‑1 (MQ=255)    tCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCCCTCCTCAACGCAGga                                                                                                                                                 <  2:854219/149‑1 (MQ=255)      gTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGgaga                                                                                                                                               <  2:345441/149‑1 (MQ=255)        gCTGATGAATCTCCACCACCTGGGTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCAACGTTCCGTGGCAGACATTTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAgc                                                                                                                                             <  1:933705/149‑1 (MQ=255)          tgatgaATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAgcgc                                                                                                                                           >  1:690481/1‑149 (MQ=255)            atgaATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGACGACAATTTAAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAgcgcgc                                                                                                                                         >  2:833830/1‑149 (MQ=255)                 tctcCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGAAGGAGAGCGCGCCAAtt                                                                                                                                    >  2:138098/1‑149 (MQ=255)                     caccacCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCa                                                                                                                                <  2:690481/149‑1 (MQ=255)                      accaccTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTACAg                                                                                                                               >  2:846737/1‑149 (MQ=255)                       ccaccTGGCTGCAATCCCAGCACCAAGCCTCAGACGGGCCGTAGTCGGGGTGGAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCACACCCCCACGCACGAGAGCGCGACCATTCCCAGc                                                                                                                              <  2:509908/149‑1 (MQ=255)                             ggCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAAAGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCcacaag                                                                                                                        >  1:287213/1‑147 (MQ=255)                                 gCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACAcggcgg                                                                                                                    <  1:71917/149‑1 (MQ=255)                                   aaTCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTg                                                                                                                  >  1:850281/1‑149 (MQ=255)                                    aTCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCACCGCAGGAGAGCGCGCTAATTTCCAGCCACACGGCGGTGa                                                                                                                 <  2:821900/149‑1 (MQ=255)                                    aTCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGa                                                                                                                 >  1:720766/1‑149 (MQ=255)                                           cACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCtt                                                                                                          >  1:16387/1‑149 (MQ=255)                                              cAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAAc                                                                                                       >  1:875168/1‑149 (MQ=255)                                                  ccTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCg                                                                                                   >  1:692258/1‑149 (MQ=255)                                                    tGGGCCGGTTGATAGACGACATGTAAATCGCACCCTTGCGCCACCGTTCCGCGGCAGACAATTTCAAAACTAAAACGGACGGCGTTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGtg                                                                                                 <  1:421805/149‑1 (MQ=255)                                                     gggCGGGTTTATAGACGATATGTAAAGCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGtgc                                                                                                <  2:550691/149‑1 (MQ=255)                                                           gcttATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGAGCGGCCCTCCCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGACGGTGACGCGCTTAACAGCGTCCCGCTcc                                                                                          >  2:740273/3‑149 (MQ=255)                                                           gTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTTAAACGGATTGCGCTCTCCTCAACGCAGGAGAGAGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTcc                                                                                          >  2:732778/1‑149 (MQ=255)                                                               ataGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTACAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGCCCGTGACGCGCTTAACAGCGTGCTGCCGCGCCt                                                                                      >  2:756707/1‑149 (MQ=255)                                                                taGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTg                                                                                     >  2:465764/1‑149 (MQ=255)                                                                 aGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGc                                                                                    >  2:581761/1‑149 (MQ=255)                                                                  gACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGAACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAAATTCCAGCCACACGGCGCGGACCCGCGTAACATCGTGCTGCCCCGCCTGcc                                                                                   >  2:66353/1‑149 (MQ=255)                                                                   aCGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACCGCGGTGACGCGCTTAACATGCGGCTTCTCCGCccgccg                                                                                  >  2:892240/1‑149 (MQ=255)                                                                     gATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGGGCAAAAAGTCACCTACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGtt                                                                                >  1:1037791/1‑149 (MQ=255)                                                                     gATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCCCCCATTCCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGtt                                                                                <  2:654733/149‑1 (MQ=255)                                                                     gATATGGAAATCGAACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTTCGCCTGCCGtt                                                                                <  1:696733/149‑1 (MQ=255)                                                                        atGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCGCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCCTAACATAGTGCTGCTCCGCCTGCCGTTGGa                                                                             >  2:333008/1‑149 (MQ=255)                                                                         tGTAAATCGCCCCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTCCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGAt                                                                            <  1:345128/149‑1 (MQ=255)                                                                         tGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGAt                                                                            <  1:342676/149‑1 (MQ=255)                                                                           tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGt                                                                                                                   >  2:860263/1‑108 (MQ=255)                                                                           tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGt                                                                                                                   <  1:860263/108‑1 (MQ=255)                                                                           tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATaa                                                                          >  2:311783/1‑149 (MQ=255)                                                                           tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATaa                                                                          >  1:1022968/1‑149 (MQ=255)                                                                                 gCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCaa                                                                    <  1:917215/149‑1 (MQ=255)                                                                                 gCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCaa                                                                    <  2:692258/149‑1 (MQ=255)                                                                                 gCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCaa                                                                    >  2:426791/1‑149 (MQ=255)                                                                                     ccTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGgaga                                                                                                                                               <  1:207656/70‑1 (MQ=255)                                                                                     ccTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGgaga                                                                                                                                               >  2:207656/1‑70 (MQ=255)                                                                                       ttGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCCGTCACACGCTGCACATCGTGCTGCTCCGCCAGCCGGTGCATAATTTCACcgccgc                                                              >  2:731809/1‑149 (MQ=255)                                                                                          cgcCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGctct                                                           >  1:958709/1‑149 (MQ=255)                                                                                                cGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCaaa                                                     <  1:311783/149‑1 (MQ=255)                                                                                                  ttCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGAAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAaga                                                   <  1:138098/149‑1 (MQ=255)                                                                                                     ctgggCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGAc                                                <  1:433413/146‑1 (MQ=255)                                                                                                      gTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACa                                               >  1:715715/1‑149 (MQ=255)                                                                                                       tGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAACGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATACTTTAAACCGCGCTCTGGCAAAGACACaa                                              >  2:506380/1‑149 (MQ=255)                                                                                                          cAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGAGCCCTGGCCCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAAGCAACTc                                           >  1:488326/1‑149 (MQ=255)                                                                                                           aGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATACTTTCACCGGCCCCCTGCCAAACAGAACACTCa                                          >  2:766563/1‑149 (MQ=255)                                                                                                           aGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCa                                          >  2:142418/1‑149 (MQ=255)                                                                                                           aGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCa                                          <  1:220913/149‑1 (MQ=255)                                                                                                              cAATTTCAAAACTAAAACGGACGGTGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGc                                       <  2:323038/149‑1 (MQ=255)                                                                                                                   tCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCATCGGCGCTCTGGCAAAGAGACAACTCATGCAtttt                                  <  2:875168/149‑1 (MQ=255)                                                                                                                   tCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCAtttt                                  >  1:240372/1‑149 (MQ=255)                                                                                                                    cAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTc                                 <  2:1022968/149‑1 (MQ=255)                                                                                                                    cAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTCGGCCAATTTCATCGGCGCTCTGGCAAAGAGACAACTCATGCATTTTc                                 <  1:1092268/149‑1 (MQ=255)                                                                                                                         cTAAAGCGGACGGCGCTCACATAAACGCGGGAGTGCCCGCCAATTTCCATCCACACGGCTTTGACGCCCTCAACATCGTGCGGCTTCGCCTGCCTTTGGATAATTTCCACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCAc                            <  2:832843/149‑1 (MQ=255)                                                                                                                           aaaaCGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTc                          <  2:715715/149‑1 (MQ=255)                                                                                                                              acggacggCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGa                                                                             >  2:731127/1‑95 (MQ=255)                                                                                                                              acggacggCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGa                                                                             <  1:731127/95‑1 (MQ=255)                                                                                                                                  acggCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGAc                   <  1:833830/149‑1 (MQ=255)                                                                                                                                  acgcCGCTGTCCTCCACGCAGGAGAGCGCGCCAATTCCCCGCCAGATGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCCGCGTTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGAc                   <  1:650016/149‑1 (MQ=255)                                                                                                                                            cctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAAcagcag         <  1:142418/149‑1 (MQ=255)                                                                                                                                             ctcAACGCGGGCGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGACCTTAACATCTTGCTGCTCCGCCTGCCGTTGGATAATTTCCACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAgg        <  2:802629/149‑1 (MQ=255)                                                                                                                                             ctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATGGTGCTGCTCCGCCTGCAGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTACTGCGACCAAACaggagg        >  2:284207/1‑149 (MQ=255)                                                                                                                                             ctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAgg        >  1:1010267/1‑149 (MQ=255)                                                                                                                                             ctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAgg        >  2:761805/1‑149 (MQ=255)                                                                                                                                               cAACGGAGGAGAGCGCGGCGATTGCCAGCCACACGGCGGTGCCGCGCTTCACATCGTGCTGCTTCGCCTGCCGTTGGATAATTTCAACGGCGATCTGGCAAAGAGACAACTCATGCATTTTCGCACCTTCTGTTCCCACAAAGCAGGgc      <  2:244360/149‑1 (MQ=255)                                                                                                                                                aaCGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACGAATGCATTTTCGCCACTCCTGCGACCAAAACGCCGGgcg     >  2:603654/1‑149 (MQ=255)                                                                                                                                                 aCGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGATCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTCGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAACCAGCAGGgcgc    >  2:835083/1‑149 (MQ=255)                                                                                                                                                  cGCAGGAGAGCGCGCCAATTTCCCGCCACCCGGGGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGCTAATTTCAACGGCCCTCTGGCAAAGAGACAACTCATCCCTTTTCGCCACTCCTGCCACCCAACACAAGGgcgcc   >  2:795185/1‑148 (MQ=255)                                                                                                                                                   gCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGa  >  2:472873/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAGGGCGCGA  >  NC_000913_3_pae_tpiA/3140059‑3140353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.