Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3423731–3424234	3424565–3424238	5–835	29 [28]	[28] 29	[rrfD]–[rrlD]	[rrfD],[rrlD]

TCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTT  >  NC_000913_3_pae_tpiA/3424506‑3424714                                                             |                                                                                                                                                     tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                                              <  1:271073/149‑1 (MQ=32) tccGTTACTCTGTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCATCCACACTTCTaa                                                              <  2:452173/149‑1 (MQ=17)    cgtACTATTTAGCATGAGACCCCCCCAGTCAAACTACCCACCAGACACTTTCCGGAACCCGGATTACGGGTCAACGTGAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                                           <  2:218423/147‑1 (MQ=11)         tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                                      >  1:303330/1‑149 (MQ=32)          ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                                     <  1:717848/149‑1 (MQ=32)           tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTGCACACTTCTAAGCCTCCCAcc                                                    >  1:649772/1‑149 (MQ=17)                gaggagGCCGCGCCGGTCAAACTACCCACCTGACTCTGTCCGCAACCCGGTTTACGGGTTAACGTTAGATCATCAAACATTAACGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                               <  2:917705/149‑1 (MQ=11)                  ggatgccGCCCCAGTCAAACTCCCCACAAGACACTGTCCGCAATCCGGATTACGCGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTACACACTTCTAAGCCTCCCACCTATCCTa                                             <  2:318130/144‑1 (MQ=11)                   gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac                                            >  1:661323/1‑149 (MQ=32)                           ccccGTCAAACCACCCACCTCACCCTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATGTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACCCATCAAg                                    <  1:467915/149‑1 (MQ=11)                           cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                                    <  1:914490/149‑1 (MQ=32)                              aGTCAAACTACCCACCAGTCACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACCTCAAGGcg                                 >  1:904818/1‑148 (MQ=17)                                tCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACCCTTCTAAGCCCCCCCCCTATCCTACCCATCCAgcccca                               >  2:127759/1‑144 (MQ=11)                                    aCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTCCACATCAAGGCTCAATGt                           >  2:630422/1‑149 (MQ=17)                                     cTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt                          >  1:642227/1‑149 (MQ=32)                                      tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACCTCACGGCTCAATGTTc                         >  2:763412/1‑149 (MQ=17)                                       aCCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa                        <  1:1057415/149‑1 (MQ=32)                                        cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                       <  1:795000/149‑1 (MQ=32)                                        cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                       <  1:272918/149‑1 (MQ=32)                                         ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt                      >  2:239191/1‑149 (MQ=32)                                           accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt                    >  1:358939/1‑149 (MQ=32)                                            ccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTNTCCTACACATCCAGGCTCAAGCTNCAGTGTc                   >  2:349761/1‑149 (MQ=12)                                              aGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa                 <  2:717009/149‑1 (MQ=32)                                              aGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa                 <  1:239191/149‑1 (MQ=32)                                                acacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCCGACATTAAAGGGTGGTATTTCAAGGTCCGCTCCATGCAGACTGGCGTCCAAGCTTCTAAGCCTCCCACCCATCCTACCAATCAGGGCTCAACGTTCTGTGCCCAGc               >  2:369231/1‑149 (MQ=11)                                                   cTGTCCGCAGTCCGGATGACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTAAAGGTCGGCCCCATGCAGACTGGTGTTTTAATGATTAGGCGACCCCCGAGTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat            <  2:479818/149‑1 (MQ=2)                                                      tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt         <  2:303330/149‑1 (MQ=32)                                                         gCAACCGTGATTACGGGTCAACGTTAGAACATCAAACATCAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTaaa      <  2:904818/149‑1 (MQ=12)                                                             cccGGATTACGGGTCAACGTTAGAACATCAAACCTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCCGTGTCAAGCTATCGTCAAGGtt  >  2:213255/1‑149 (MQ=255)                                                             |                                                                                                                                                     TCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTT  >  NC_000913_3_pae_tpiA/3424506‑3424714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑