New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 1175520	76 (0.800)	12 (0.130)	10/266	11.1	14.1%	coding (94/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
	?	NC_000913_3_pae_tpiA	= 1175547	73 (0.800)					coding (121/1200 nt)	lolC	lipoprotein‑releasing system transmembrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAACTGGACGGCG  >  NC_000913_3_pae_tpiA/1175401‑1175694                                                                                                                                                    |                                                                                                                                                    tttGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTgg                                                                                                                                                  <  1:995973/150‑1 (MQ=255)  ttGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGt                                                                                                                                                 <  4:588107/150‑1 (MQ=255)    gCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTgcgga                                                                                                                                               >  4:325478/1‑146 (MQ=255)      tACAGCAACCAGACGGATTTCATGTGCCAACCTGTCGCTCTTTTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCCGTCGTTTCGTCTCCTGGCTTTCTACCCTCGGCATTACCCTTGGGGTGATGGCGCTGGTcaca                                                                                                                                             <  2:408290/150‑1 (MQ=255)      tACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGGTCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTcaca                                                                                                                                             <  1:630978/150‑1 (MQ=255)           cAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTAtt                                                                                                                                        <  2:181400/150‑1 (MQ=255)              ccAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTc                                                                                                                                     >  1:902773/1‑150 (MQ=255)               cAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCa                                                                                                                                    <  1:852657/150‑1 (MQ=255)                    ggATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgat                                                                                                                               <  1:52636/150‑1 (MQ=255)                    ggATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgat                                                                                                                               >  1:496406/1‑150 (MQ=255)                    ggATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCA‑TACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgatg                                                                                                                              >  3:110027/1‑150 (MQ=255)                       tttCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGTGGGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGGATTGTCACtgatga                                                                                                                             >  2:678021/1‑150 (MQ=255)                       tttCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtga                                                                                                                                >  1:12064/1‑146 (MQ=255)                       tttCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtga                                                                                                                                <  2:12064/146‑1 (MQ=255)                           aTGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGc                                                                                                                        >  1:130741/1‑150 (MQ=255)                              tACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCttt                                                                                                                     <  1:436041/150‑1 (MQ=255)                                 cAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTg                                                                                                                                                   <  2:618936/117‑1 (MQ=255)                                 cAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTg                                                                                                                                                   >  1:618936/1‑117 (MQ=255)                                  aaCCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAgc                                                                                                                 <  2:902773/150‑1 (MQ=255)                                         cGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCt                                                                                                          >  4:521824/1‑150 (MQ=255)                                           ctctATTTATTGGCCTGCGTTACATGCGT‑TGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCTGCATTACCCTCGGGGTGATGGCGCTGGTCACATTTTTCTCAGTGATTAACTGCTTTGAGCGCGAGCttt                                                                                                        <  2:796552/150‑3 (MQ=255)                                           ctctATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGc                                                                                                        >  2:473991/1‑150 (MQ=255)                                              tatttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                                                     <  3:2890/150‑1 (MQ=255)                                              tatttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                                                     >  3:398949/1‑150 (MQ=255)                                              tatttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                                                     >  1:960258/1‑150 (MQ=255)                                               atttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                                                     >  4:434527/1‑149 (MQ=255)                                               atttattGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCaaa                                                                                                     <  3:434527/149‑1 (MQ=255)                                                   attGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAaacaac                                                                                                <  1:766311/150‑1 (MQ=255)                                                    ttGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAacaaca                                                                                               <  2:689874/150‑1 (MQ=255)                                                             gTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGcc                                                                                      >  2:213000/1‑150 (MQ=255)                                                                aCATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGa                                                                                   <  1:971176/150‑1 (MQ=255)                                                                aCATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGa                                                                                   <  2:881860/150‑1 (MQ=255)                                                                aCATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGa                                                                                   >  3:588238/1‑150 (MQ=255)                                                                 cATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCTCAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGAt                                                                                  <  1:495141/150‑1 (MQ=255)                                                                  aTGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATg                                                                                 >  2:354901/1‑150 (MQ=255)                                                                     cGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTCCCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCca                                                                              <  1:17902/150‑1 (MQ=255)                                                                     cGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCca                                                                              >  1:484237/1‑150 (MQ=255)                                                                       t‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCcaca                                                                            <  1:25414/150‑1 (MQ=255)                                                                       t‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATACTTGGCCGGATGCcaca                                                                            >  1:523579/1‑150 (MQ=255)                                                                              tGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCA‑TACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAAtt                                                                     <  4:110027/150‑1 (MQ=255)                                                                               gCAGCGGACCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGCCTTTGTGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAAtt                                                                     >  4:20378/1‑150 (MQ=255)                                                                                 aGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtct                                                                   >  4:54557/1‑150 (MQ=255)                                                                                 aGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtct                                                                   >  3:495159/1‑150 (MQ=255)                                                                                  gCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTTGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctc                                                                  >  4:456836/1‑150 (MQ=255)                                                                                   cGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                                                 >  1:118249/1‑150 (MQ=255)                                                                                   cGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                                                 <  2:438680/150‑1 (MQ=255)                                                                                   cGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAACGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                                                 <  3:619941/150‑1 (MQ=255)                                                                                    ggATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctctc                                                                <  1:804783/150‑1 (MQ=255)                                                                                          cTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGa                                                          >  1:524757/1‑150 (MQ=255)                                                                                          cTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGa                                                          >  2:915285/1‑150 (MQ=255)                                                                                              ggTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCAACGTATTGTCCGTGATCAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGACCTGATGCCACAGGCAATTCTCTCTTCTGAGCAt                                                      >  1:754833/1‑150 (MQ=255)                                                                                               gTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATg                                                     >  2:857710/1‑150 (MQ=255)                                                                                                ccGTGTCGTCTCCTGGCTTTCTACCAGCGGCATTACCCTCGGGGGGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGCCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATgg                                                    <  4:350479/149‑1 (MQ=255)                                                                                                      cGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGctctct                                              <  1:354901/150‑1 (MQ=255)                                                                                                             tgtcTTGCTGCCATCGGCATTGCCCTCGGTGTGATGGCGCTGGTCACAGTAGTGTCAGTGATGAACGGCTTTGAGCGCGATCTGCAAAACAACGTCCTTTGCCTGATGCCACAGGGAATTCTCGCTTCTGAGCATTGCTCTCTTAACCCg                                       <  4:384614/147‑1 (MQ=255)                                                                                                              ggCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgatg                                                                                                                              >  1:544557/1‑62 (MQ=255)                                                                                                              ggCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGtgatg                                                                                                                              <  2:544557/62‑1 (MQ=255)                                                                                                              ggCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCgc                                      <  1:473991/150‑1 (MQ=255)                                                                                                                 tttCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGGCACAGGCAATTCTCTCTTCTGAGCATGGGTCTCTTAACCCgcagc                                   >  1:643120/1‑150 (MQ=255)                                                                                                                   tCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCa                                                                                                       <  4:529829/80‑1 (MQ=255)                                                                                                                   tCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCa                                                                                                       >  3:529829/1‑80 (MQ=255)                                                                                                                       ccATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAg                                                                           >  1:554241/1‑104 (MQ=255)                                                                                                                       ccATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAg                                                                           <  2:554241/104‑1 (MQ=255)                                                                                                                        cATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTccc                            <  2:316052/150‑1 (MQ=255)                                                                                                                         aTCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCa                           >  1:471852/1‑150 (MQ=255)                                                                                                                          tCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTAGTGTCAGGGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAg                          >  4:28701/1‑150 (MQ=255)                                                                                                                            ggCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                                                 >  1:693511/1‑109 (MQ=255)                                                                                                                            ggCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATtctct                                                                 <  2:693511/109‑1 (MQ=255)                                                                                                                                ttACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACgg                    <  2:960258/150‑1 (MQ=255)                                                                                                                                 tACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGc                   >  1:394673/1‑150 (MQ=255)                                                                                                                                    ccTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGt                <  1:213000/150‑1 (MQ=255)                                                                                                                                     cTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTc               >  2:101656/1‑150 (MQ=255)                                                                                                                                     cTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAAGTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTc               >  3:352138/1‑150 (MQ=255)                                                                                                                                         gggTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCtt                                             >  1:397734/1‑116 (MQ=255)                                                                                                                                         gggTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCtt                                             <  2:397734/116‑1 (MQ=255)                                                                                                                                         gggTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAAc           >  3:579535/1‑150 (MQ=255)                                                                                                                                                ggCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAACTGGACgg    >  1:724350/1‑150 (MQ=255)                                                                                                                                                  cgcTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCGGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAACTGGACGGCg  >  2:826218/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                    TTTGCTACAGCAACCAGACGGATTTCATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGT‑GGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAACTGGACGGCG  >  NC_000913_3_pae_tpiA/1175401‑1175694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.