New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 3943635	NA (NA)	14 (0.160)	12/260	9.9	15.7%	intergenic (+125/‑69)	gltU/rrlC	tRNA‑Glu/23S ribosomal RNA of rrnC operon
	?	NC_000913_3_pae_tpiA	= 4037446	79 (0.840)					intergenic (+111/‑73)	alaT/rrlA	tRNA‑Ala/23S ribosomal RNA of rrnA operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGG  >  NC_000913_3_pae_tpiA/4037334‑4037545                                                                                                                  |                                                                                                     caTCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAacac                                                                >  2:302051/1‑150 (MQ=31)   tctcTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCTCAACACga                                                              >  2:210183/1‑150 (MQ=17)    ctctGTAGAAAATAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgat                                                             <  4:439735/150‑1 (MQ=16)     tctGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg                                                            <  3:513330/150‑1 (MQ=34)      ctGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGTGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatga                                                           <  2:315693/150‑1 (MQ=25)       tGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                          <  3:192883/150‑1 (MQ=35)       tGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                          <  1:937744/150‑1 (MQ=35)       tGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatgat                                                          <  1:952144/150‑1 (MQ=35)         tAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGATGAACCTTCACAACA‑TG‑ACAACAAAACGTTATTCGTGAGAATCTCAAACTTTCGCAACACGAtgatga                                                        >  1:94805/1‑150 (MQ=11)           gTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAAt                                                      <  3:602638/150‑1 (MQ=38)            tGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATc                                                     >  2:211621/1‑150 (MQ=38)            tGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATc                                                     <  4:198824/150‑1 (MQ=38)             gATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGGTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCg                                                    >  3:531651/1‑150 (MQ=38)              aTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCga                                                   >  4:643932/1‑150 (MQ=37)              aTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACAGCGAAGTTTTGCTCTTTAAAAATCAGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCga                                                   >  2:738365/1‑150 (MQ=25)               ttAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaa                                                  >  1:326313/1‑150 (MQ=38)                taaataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaa                                                 <  3:233085/150‑1 (MQ=38)                   ataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaa                                              >  3:380290/1‑150 (MQ=39)                   ataaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaa                                              >  4:82671/1‑150 (MQ=38)                    taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaaa                                             <  4:486281/150‑1 (MQ=38)                    taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaaa                                             <  3:608089/150‑1 (MQ=39)                    taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaaa                                             <  2:610370/150‑1 (MQ=39)                    taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaaa                                             >  2:154354/1‑150 (MQ=39)                    taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaa                                                  <  2:422133/145‑1 (MQ=38)                    taaaAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaa                                                  >  1:422133/1‑145 (MQ=38)                      aaaaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACa                                           <  3:68985/150‑1 (MQ=39)                       aaaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaaa                                             <  3:468191/147‑1 (MQ=39)                       aaaaTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCgaaagaaa                                             >  4:468191/1‑147 (MQ=38)                          aTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCtt                                       <  1:211621/150‑1 (MQ=39)                          aTACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCtt                                       >  2:415161/1‑150 (MQ=39)                           tACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTc                                      >  4:506532/1‑150 (MQ=38)                           tACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTc                                      <  4:292559/150‑1 (MQ=38)                           tACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTc                                      <  3:603834/150‑1 (MQ=39)                           tACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTc                                      <  3:431830/150‑1 (MQ=39)                              ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGCTGATGAATCGAAAGAAACATCTTCggg                                   >  1:834926/1‑150 (MQ=37)                              ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCggg                                   >  4:221619/1‑150 (MQ=38)                              ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCggg                                   <  1:462055/150‑1 (MQ=39)                              ttCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCggg                                   <  2:145508/150‑1 (MQ=39)                                cAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGtt                                 <  1:316054/150‑1 (MQ=39)                                  gagTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTtgt                               <  2:58105/150‑1 (MQ=39)                                  gagTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTtgt                               <  1:203513/150‑1 (MQ=39)                                   agTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTtgtg                              <  4:156863/150‑1 (MQ=37)                                    gtgtACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGa                             <  2:763352/150‑1 (MQ=39)                                    gtgtACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGa                             <  1:158410/150‑1 (MQ=39)                                     tgtACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAg                            <  4:323073/150‑1 (MQ=39)                                       tACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGt                          <  4:84757/150‑1 (MQ=38)                                       tACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGt                          >  4:280713/1‑150 (MQ=39)                                       tACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGt                          <  3:215807/150‑1 (MQ=39)                                        aCCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGtt                         <  2:851066/150‑1 (MQ=39)                                        aCCTGCAAAGGGTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGAGCAAGCTGAAACTTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAgggt                         >  4:615797/1‑148 (MQ=255)                                         ccTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTa                        >  2:187542/1‑150 (MQ=39)                                          cTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTaa                       >  1:84296/1‑150 (MQ=39)                                           tGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAg                      <  1:418399/150‑1 (MQ=39)                                            gCAAAGGTTCACTGCGAAGTTTTGCTCTTTACAAATCTGGATCCAGCCGAACCTTCA‑ACAACAAACCACCAAAA‑GTTGTCCGTGCGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGc                     <  1:98648/150‑1 (MQ=11)                                            gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑TTTGTTCGTGAGTCTCTCAAAGTTTCGCAACACGAGGATGGATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGc                     >  1:464664/1‑150 (MQ=255)                                            gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCg                                                    >  2:916525/1‑119 (MQ=37)                                            gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCg                                                    <  1:916525/119‑1 (MQ=37)                                            gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGc                     >  1:107961/1‑150 (MQ=38)                                            gCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGc                     >  1:996266/1‑150 (MQ=38)                                             cAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                    >  4:122114/1‑150 (MQ=39)                                             cAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                    >  2:398752/1‑150 (MQ=39)                                                aGGTTCACTGCGAAGTTTTGCTATTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACt                 <  4:588369/150‑1 (MQ=255)                                                  gTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTaa               >  1:400860/1‑150 (MQ=38)                                                   ttCAGTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAGCGAACCATCTTCGGGTTGTGAGGTTAAGCGACTAAg              >  4:151019/1‑150 (MQ=255)                                                   ttCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAg              >  4:150994/1‑150 (MQ=37)                                                     cACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg            <  1:11811/150‑1 (MQ=38)                                                      aCTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                    >  2:274276/1‑141 (MQ=38)                                                      aCTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCg                    <  1:274276/141‑1 (MQ=38)                                                       cTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa          >  2:623317/1‑150 (MQ=37)                                                          cGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTacac       >  2:878893/1‑150 (MQ=34)                                                          cGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTacac       <  1:637545/150‑1 (MQ=34)                                                            aaGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACgg     <  1:9377/150‑1 (MQ=32)                                                             aGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAGAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGt    <  4:492532/150‑1 (MQ=17)                                                             aGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGt    <  3:450411/150‑1 (MQ=32)                                                              gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTg   <  2:592517/150‑1 (MQ=31)                                                              gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTg   >  2:424339/1‑150 (MQ=31)                                                              gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTg   <  1:136556/150‑1 (MQ=31)                                                               ttttGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg  <  2:326313/150‑1 (MQ=11)                                                               ttttGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg  >  4:182569/1‑150 (MQ=11)                                                                                                                  |                                                                                                     CATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGA‑AACACTGAACAACGAAA‑GTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGG  >  NC_000913_3_pae_tpiA/4037334‑4037545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.