| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 4,472,342 | (A)8→9 | coding (108/135 nt) | pyrL ← | pyrBI operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 4,472,334 | 1 | . | A | 88.0% | 241.8 / 27.0 | 75 | coding (116/135 nt) | pyrL | pyrBI operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base . (6/3); new base A (29/37); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
TGCTTCAACAGCTCTGGTTGCGGGTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTCCGGCATTATAC > NC_000913_3_pae_tpiA/4472187‑4472481 | tgCTTCAACAGCTCTGGTTGCGGGGTTGGTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aa > 3:255423/1‑150 (MQ=255) tCAACAGCTCTGGTTGCGGGTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa > 4:515210/1‑150 (MQ=255) aaCAGCTCTGGTTGCGGGTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa‑aa > 4:464703/1‑150 (MQ=255) aGCTCTGGTTGCGGGTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa‑aaagc > 1:776377/1‑147 (MQ=255) gggTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAg > 2:770667/1‑150 (MQ=255) gggTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAg > 2:732232/1‑150 (MQ=255) gggTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAg > 4:142908/1‑150 (MQ=255) gggTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑CCGATTGAg > 4:364244/1‑150 (MQ=255) gTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAGGGACATCGCGACTAAGGTCGGTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑AACAA‑AA‑GACCC‑TCGATTGAgg > 1:205910/1‑150 (MQ=255) gTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAggg > 1:138174/1‑150 (MQ=255) cTTTCATGTGCGCCGGTGAGGCCGGCACCAGATTAAGGTCATCGCGACTAAGATGGTTTATGGAAATGATATGTTTCTGATATAGAGGATTAGTCATCTTTTATCTCCTGACGCAAGGAAA‑AAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTgg < 4:336579/150‑1 (MQ=255) tttCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCCTCGCGAATAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGAGTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTggg > 1:22319/1‑150 (MQ=255) tttCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTggg > 3:341646/1‑150 (MQ=255) tCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCAATCGAGGGGCtttttt < 1:111248/150‑6 (MQ=255) aGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATg > 2:783159/1‑150 (MQ=255) gTTTCGGCGCGGGCGCCAGCAACAGATGAAGGGCATGGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GAAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATgg < 2:535159/150‑1 (MQ=255) gTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCATGG‑ACAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGTGCTGGGAATgg < 2:535117/150‑1 (MQ=255) gTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGACTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATgg < 2:624904/150‑1 (MQ=255) tttCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATggg > 2:231155/1‑150 (MQ=255) tCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AACAA‑GCCCC‑TCGATGGAGGGGCTCGGactccgtc > 1:627430/1‑143 (MQ=255) gccgcTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCTTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGACTGAGGGGGTGGGATTGGTTGAt > 2:34177/1‑150 (MQ=255) ccgcTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATc < 3:239692/150‑1 (MQ=255) cTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GAAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAAc < 3:518699/150‑1 (MQ=255) tGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAAca < 2:188902/150‑2 (MQ=255) gTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACgg < 1:726433/150‑1 (MQ=255) gCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGgaa < 1:246331/150‑1 (MQ=255) ccAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGgaag < 3:42392/150‑1 (MQ=255) cACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑t < 1:775887/110‑1 (MQ=255) cACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑t > 2:775887/1‑110 (MQ=255) cAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACg > 2:815685/1‑150 (MQ=255) aTTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCa < 1:321168/150‑1 (MQ=255) aTTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCa < 3:353620/150‑1 (MQ=255) aTTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCa < 3:26122/150‑1 (MQ=255) gTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGc > 1:106577/1‑150 (MQ=255) tCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTc > 3:91864/1‑150 (MQ=255) tCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa‑aaa < 3:86457/88‑2 (MQ=255) tCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa‑aaa > 4:86457/1‑87 (MQ=255) cgcgACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa‑aaa > 4:313026/1‑86 (MQ=255) cgcgACTAAGGTCGTTTAGGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑aaa‑a‑‑aa‑aaa < 3:313026/87‑2 (MQ=255) gcgACTAAGGGGGTTTATGGAAATGATATGTTACTGAGAAAACTGATTAGCCATCTTTTATCACCTGACGAATGA‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGtggt < 2:321469/150‑4 (MQ=255) aCTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCttttt < 3:464703/150‑1 (MQ=255) tAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGGCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTc < 1:465658/150‑1 (MQ=255) tAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTc < 1:478125/150‑1 (MQ=255) tAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTc > 3:74827/1‑150 (MQ=255) tAAGGACGTTTATGGAAATTATATGTTTCTGATATAGCGGATTATCCATCTTTTATCTCCTAACAACTGG‑GAAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGTTCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTc < 4:15771/150‑1 (MQ=255) ggTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AA‑AACGCCAC‑TCGATAGACGAGCAACGCACGGCAAAACAACCGGAAGAAAAAAGGCAGGCAAGCGTCTTTTTTCAGa > 3:47508/1‑150 (MQ=255) gTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGAc > 4:20660/1‑150 (MQ=255) gTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCa > 2:341246/1‑131 (MQ=255) gTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCa < 1:341246/131‑1 (MQ=255) tttggggAAATGATATGTTTCTGGTATAGCGGATGAGCCATCTTGTATCGCCTGACGGCTGG‑GC‑AAAGA‑‑AA‑GA‑GCTCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCGGGCCAGTGGCTTTTTTCAGACGCgg > 4:445603/6‑150 (MQ=255) aTGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTaa < 4:91864/150‑1 (MQ=255) tGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAg > 2:295682/1‑150 (MQ=255) tGGAAATGATATGGTTCTGATATAGCGGATTAACCATCTTTTAACTCCGGACGCCTTG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGAAAATGGGAGAACAACGCGTATAGATTCTTCAGGCCAGCGTGTTTTCTGAGACGGGGTAAg < 2:22319/150‑1 (MQ=255) agtGATATGGGTCTGATAGAGCGGATTAGCCATGTTTGATTTCCGGACGAAAGA‑AAAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACaa < 2:694617/148‑1 (MQ=255) tatGTTTGTGATATAGCGGATTAGCCATCTTTTATCGCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCA‑TCGATTGAGGGGCTGGGAATGGGTGAAAAAAAAAAAAAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGt < 2:673960/150‑1 (MQ=255) tatGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGt < 3:20660/150‑1 (MQ=255) atGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTc < 1:815685/150‑1 (MQ=255) tGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCg < 1:770667/150‑1 (MQ=255) tttCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AA‑AA‑ACCCCGTTGATGGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGaa < 3:9272/150‑1 (MQ=255) tttCTAATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GACAT‑TCTATTGAGGGGCTGGGAATGGGTGATTAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGaa < 3:9323/150‑1 (MQ=255) tCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGAGCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTCAGATAAAATGTCGAaca > 1:37043/1‑150 (MQ=255) tGATATAGCGGAGTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAacaca < 3:469353/150‑1 (MQ=255) taGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACCAAATGTCGAACACACTGaa > 2:26915/1‑150 (MQ=255) aGCGGATTAGACATCTTTTATCTACTGACGCCTGG‑GAAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAAc < 2:365153/150‑1 (MQ=255) gCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCa > 1:731727/1‑150 (MQ=255) gATTAGCCATCTTTTATTTTTTTTTGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTTAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATa > 4:328797/1‑150 (MQ=255) gATTAGCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATa < 3:142908/150‑1 (MQ=255) gCCATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGAATGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAACCCGGCAGGTCAGCGACTTTTTTCAGACGCGGTAAGACAAAAGGTGGAACACACTGAACCACACAgcc > 4:292445/1‑150 (MQ=255) cATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAACAAGGCCGGCCAGCGTCTTTTTTCAGACGAGGTAAGAAAAACAGTCGACTAAACTGAACAATACAtcata > 1:376665/1‑147 (MQ=255) cATCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACAtcctc > 2:727050/1‑150 (MQ=255) tCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGt > 4:429610/1‑62 (MQ=255) tCTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGt < 3:429610/62‑1 (MQ=255) cTTTTATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCg < 1:732232/150‑1 (MQ=255) ttttATCTCCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGTATGGGTGATCAGCGGGACGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCgg < 1:34177/150‑1 (MQ=255) tcCTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTg > 1:483077/1‑150 (MQ=255) cTGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACGGAACCATACATCCTCCCGGCAAATTGTc > 3:465984/1‑150 (MQ=255) tGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTcc < 1:727050/150‑1 (MQ=255) tGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTcc > 1:326047/1‑150 (MQ=255) tGACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTcc > 1:296122/1‑150 (MQ=255) gACGCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTCCg < 3:256008/150‑1 (MQ=255) gCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTCCGGCa > 4:197337/1‑150 (MQ=255) gCCTGG‑GCAAAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTCCGGCa < 2:475580/150‑1 (MQ=255) g‑gC‑AAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTCCGGCATTATAc < 2:106577/150‑1 (MQ=255) | TGCTTCAACAGCTCTGGTTGCGGGTTTGCTTTCAGTTTCGCCGCTGTCGCCAGCACCAGATTAAGGTCATCGCGACTAAGGTCGTTTATGGAAATGATATGTTTCTGATATAGCGGATTAGCCATCTTTTATCTCCTGACGCCTGG‑GC‑AAA‑A‑‑AA‑AA‑GCCCC‑TCGATTGAGGGGCTGGGAATGGGTGATCAACGGGAAGAAAAACGGCAGGCCAGCGTCTTTTTTCAGACGCGGTAAGACAAAATGTCGAACACACTGAACCATACATCCTCCCGGCAAATTGTCCGGCATTATAC > NC_000913_3_pae_tpiA/4472187‑4472481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |