Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913_3_pae_tpiA	1,743,960	G→A	L168L (CTG→CTA)	mdtK →	multidrug efflux system transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913_3_pae_tpiA	1,743,960	0	G	A	100.0%	218.3 / NA	61	L168L (CTG→CTA)	mdtK	multidrug efflux system transporter
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (34/27);  total (34/27)

TCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACATTAAA  >  NC_000913_3_pae_tpiA/1743816‑1744095                                                                                                                                                 |                                                                                                                                        tCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGt                                                                                                                                    <  4:98103/150‑1 (MQ=255)    ggCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGaa                                                                                                                                 <  1:141831/150‑1 (MQ=255)     gCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAAc                                                                                                                                >  1:758831/1‑150 (MQ=255)          ggCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATccc                                                                                                                           >  2:767923/1‑150 (MQ=255)          ggCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATccc                                                                                                                           >  2:767922/1‑150 (MQ=255)             ggACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGt                                                                                                                        >  4:337354/1‑150 (MQ=255)             ggACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGt                                                                                                                        <  4:57678/150‑1 (MQ=255)                     ccGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACtata                                                                                                                <  1:755974/150‑1 (MQ=255)                          ggTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCttt                                                                                                           >  2:352092/1‑150 (MQ=255)                             tATCTGCGTGCGTAGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCtgtatt                                                                                                        >  1:334481/1‑150 (MQ=255)                              aTCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCtttattt                                                                                                       >  3:285461/1‑150 (MQ=255)                                cTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTttatttat                                                                                                     <  1:810/150‑1 (MQ=255)                                 tgcgtgcgTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATg                                                                                                    <  3:110793/150‑1 (MQ=255)                                  gcgtgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACAATATCTTTATTTATgg                                                                                                   >  4:466197/1‑150 (MQ=255)                                    gtgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTc                                                                                                 >  2:64626/1‑150 (MQ=255)                                     tgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTg                                                                                                                                   <  1:305833/115‑1 (MQ=255)                                     tgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTg                                                                                                                                   >  2:305833/1‑115 (MQ=255)                                     tgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCa                                                                                                >  2:83006/1‑150 (MQ=255)                                       cgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAGCTATATCTTTATTTATGGTGAtt                                                                                              >  4:392289/1‑150 (MQ=255)                                        gttgttGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCAttt                                                                                             >  3:246868/1‑150 (MQ=255)                                        gttgttGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAAGACTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCAttt                                                                                             <  2:52306/150‑1 (MQ=255)                                             tgtgGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTa                                                                                        >  1:802486/1‑150 (MQ=255)                                                 gggCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGcc                                                                                    <  1:434135/150‑1 (MQ=255)                                                 gggCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGcc                                                                                    >  3:444387/1‑150 (MQ=255)                                                    cgcgcCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGa                                                                                 <  1:455394/150‑1 (MQ=255)                                                           ggATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGt                                                                          >  2:777394/1‑150 (MQ=255)                                                                   gTTCTTCCAGGTTGCGAGATACCAGTGTTAAGGTCTGGCACAAAACAAGCCGGGTATGGTAATGAGCTTTATCGGTATATTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGTTCGGTGGTgttgg                                                                  <  4:285461/150‑1 (MQ=255)                                                                         ccAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTgtgg                                                            <  1:432843/150‑1 (MQ=255)                                                                         ccAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTgtgg                                                            <  1:432793/150‑1 (MQ=255)                                                                            ggTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTgtggcgt                                                         >  2:453442/1‑150 (MQ=255)                                                                                  ccGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTAc                                                   >  4:490181/1‑150 (MQ=255)                                                                                  ccGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTAc                                                   <  1:767922/150‑1 (MQ=255)                                                                                  ccGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTAc                                                   <  1:767923/150‑1 (MQ=255)                                                                                   cGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACt                                                  >  2:82009/1‑150 (MQ=255)                                                                                   cGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACt                                                  <  1:352092/150‑1 (MQ=255)                                                                                      aaCCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTTGCGTTGTTTGTGGCGTGGCTACTgcg                                               >  4:496146/1‑150 (MQ=255)                                                                                         cAGTGTGAAGGTCTGGCAAAAACCAAGGCGGGTAAGGTAAGGGGCTTTATAGGCCGACTGGTGAACATACCGGGGTAGTATAGCTGTGTTTAGGGTCAGGTAGGTGTGCCTGAGCCCGGGGGCGTTGGGTGGGGCGAGGCTACCtcggcg                                            >  4:239621/1‑150 (MQ=255)                                                                                         cAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTgcggcg                                            >  4:322909/1‑150 (MQ=255)                                                                                           gtgtGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTgcggc                                             >  2:361125/1‑147 (MQ=255)                                                                                           gtgtGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTgcggc                                             <  1:361125/147‑1 (MQ=255)                                                                                           gtgtGAAGGTCTGGCAAAAACCAAGCCGGGTACGGGAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGCGCTCCGTGGCGTTGGTTGTGGCGTGGCTACTGCCGCGgt                                          >  3:374253/1‑150 (MQ=255)                                                                                             gtgAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGCACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGgtgt                                        >  2:732738/1‑150 (MQ=255)                                                                                                aaGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTAtt                                     <  2:802486/150‑1 (MQ=255)                                                                                                         cAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGt                            >  1:728035/1‑150 (MQ=255)                                                                                                          aaaaaCCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCgttg                                                                   <  4:440216/110‑1 (MQ=255)                                                                                                          aaaaaCCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCgttg                                                                   >  3:440216/1‑110 (MQ=255)                                                                                                          aaaaaCCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGtt                           >  2:312606/1‑150 (MQ=255)                                                                                                                  aGCCGGGTATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCa                   >  3:200384/1‑150 (MQ=255)                                                                                                                         tATGGTACGGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCGTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTc            <  4:102199/150‑1 (MQ=255)                                                                                                                         tATGGTAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTc            <  1:391069/150‑1 (MQ=255)                                                                                                                              tAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGGGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACa       <  2:716977/150‑1 (MQ=255)                                                                                                                              tAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCtt                       <  2:45589/134‑1 (MQ=255)                                                                                                                              tAATGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCtt                       >  1:45589/1‑134 (MQ=255)                                                                                                                                aTGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACAtt     <  3:245326/150‑1 (MQ=255)                                                                                                                                aTGGGCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACAtt     <  3:245300/150‑1 (MQ=255)                                                                                                                                   ggCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACATTaaa  <  3:337354/150‑1 (MQ=255)                                                                                                                                   ggCTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACATTaaa  >  1:342187/1‑150 (MQ=255)                                                                                                                                     cTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGgt                                          >  4:287960/1‑108 (MQ=255)                                                                                                                                     cTTTATCGGCCTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGgt                                          <  3:287960/108‑1 (MQ=255)                                                                                                                                              ccTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTa                                       >  4:200890/1‑102 (MQ=255)                                                                                                                                              ccTACTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGtt              >  3:307726/1‑127 (MQ=255)                                                                                                                                                 |                                                                                                                                        TCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACATTAAA  >  NC_000913_3_pae_tpiA/1743816‑1744095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑