New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	496998 =	NA (NA)	3 (0.130)	3/258	3.0	NA	intergenic (+4/‑177)	htpG/adk	protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase/adenylate kinase
	?	NC_000913_3_pae_tpiA	497030 =	NA (NA)					intergenic (+36/‑145)	htpG/adk	protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase/adenylate kinase
Rejected: Coverage evenness skew score above cutoff.

CGTGCGGCAGATACTGAAGATGAAGCGAAGTTCAGCGAGTGGGTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCTTGAGGCAATCGCCTGTTGGTGGTAT  >  NC_000913_3_pae_tpiA/496854‑497124                                                                                                                                                 |                                                                                                                               cGTGCGGCAGATACTGAAGATGAAGCGAAGTTCAGCGAGTGGGTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGc                                                                                                                            <  1:180796/149‑1 (MQ=255)       gCAGATACTGAAGATGAAGCGAAGTCAAGCCATAGTGTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATg                                                                                                                      >  2:199123/1‑149 (MQ=255)            tagtGAAGGTGAAGCGAAGTAGCGAGAGTGGGTAGAACTGCTGCGGGTTCAGGGGCTGTCGGCACGAGGCGCCGCGCTGGAAGGCCCGGACCTGTTTATTCGTCGTATGAGCCAGCTGCTGGGTCCCTGATGTAATGCCGGTTGACCtt                                                                                                                 <  2:240241/146‑1 (MQ=255)                               gtCAGCGAGTGGGTAGAACTGCTGCTGGGTCAGGCGTTGCTGGAAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCGTGATGTAATGCCGGATTACCTTCGTGTCATCCGGCAttttt                                                                                              <  2:119162/148‑1 (MQ=255)                                          ggTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTAATCGTCGTATGAACCAGCAGCTGGTATCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTcatcat                                                                                   >  1:131728/1‑149 (MQ=255)                                                                     gctgGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCa                                                        >  1:216747/1‑149 (MQ=255)                                                                         gCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTaa                                                    <  1:199123/149‑1 (MQ=255)                                                                                         gggagggtCCGAGCCTGTTTATTCGTGGTATGGACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAgg                                    <  2:60115/142‑1 (MQ=255)                                                                                                   gAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCtt                          <  1:67441/149‑1 (MQ=255)                                                                                                                      aTGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCTTGAGGCAATCGCCTGTtggt       <  1:340703/149‑1 (MQ=255)                                                                                                                      aTGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCTTGAGGCAATCGCCTGTtggt       <  1:47773/149‑1 (MQ=255)                                                                                                                       tGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCTTGAGGCAATCGCCTGTtggtg      <  1:301008/149‑1 (MQ=255)                                                                                                                           ccAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCTTGAGGCAATCCCCTGTTGGTGGTAt  >  1:359141/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                               CGTGCGGCAGATACTGAAGATGAAGCGAAGTTCAGCGAGTGGGTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGATGTAATGCCGGATGACCTTCGTGTCATCCGGCATTTTTCTTTTCATCATCTGCACTTTCCGCAAATTATCTCGCCATTAACCGTTTCAGCCCCAGGTGCCTTTCTTGAGGCAATCGCCTGTTGGTGGTAT  >  NC_000913_3_pae_tpiA/496854‑497124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.