New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	4122239 =	76 (3.060)	3 (0.130)	3/268	3.1	4.1%	intergenic (‑36/+57)	hslV/ftsN	peptidase component of the HslUV protease/essential cell division protein
	?	NC_000913_3_pae_tpiA	4122259 =	67 (2.860)					intergenic (‑56/+37)	hslV/ftsN	peptidase component of the HslUV protease/essential cell division protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCG  >  NC_000913_3_pae_tpiA/4122093‑4122387                                                                                                                                                   |                                                                                                                                                     aCGGCGGACCTTTTTCACGTTGCCTCTCATTACGGTATTGCCCCACGTGGCCTGACCATCACCAGCGATCACCACATGGCCGTTACGGCGTACGCGTACTAAAGTTGTATCGAGCTGACCCCTTGGTTGCTAATACAGAGGACAAAccc                                                                                                                                                    >  1:321691/1‑149 (MQ=255)   ggcggACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTAGGCTTACTATAGTTGTCACGAGCTGACCCCTTGTTTACGAATACAGAGAACAACCCCCg                                                                                                                                                  >  2:413688/1‑149 (MQ=255)   ggcggACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATAACCAGCGATGGACACATGACCGTTACGGCGTACGCTTACTATAGTTGTTACGAGGTGACACCTTGGTTACGAATACAGAGTACAAGCCACg                                                                                                                                                  >  2:47378/1‑149 (MQ=255)       gACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGGCCCCTTGGTGACGAATACAATGTACAAAcccgcacac                                                                                                                                              >  2:253189/1‑143 (MQ=255)          cTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACaaaa                                                                                                                                           <  2:292493/149‑1 (MQ=255)          cTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACaaaa                                                                                                                                           <  1:277929/149‑1 (MQ=255)          cTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGGGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACaaaa                                                                                                                                           <  1:219575/149‑1 (MQ=255)          cTTTTTCACGTTGCCTTTAATGACGGTATTGCCCAACGTGGCCTGACCATTACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTAGAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACaaaa                                                                                                                                           <  1:69041/149‑1 (MQ=255)                cACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACgg                                                                                                                                     <  1:77087/149‑1 (MQ=255)                 tcGTTTCCGTTCATTAGGGTATTGACAAGCGTGGCCTGAACATCACCAGCGATGGCCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGCTTACGAATACAGAGTACAAACCCCGTACAAAAGTACggg                                                                                                                                    <  2:317573/148‑1 (MQ=255)                 aCGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACggg                                                                                                                                    >  1:38119/1‑149 (MQ=255)                         tttCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATg                                                                                                                            >  1:232949/1‑149 (MQ=255)                          ttCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTCCTATAGTTGTCACGAGCTGACCCCTTGGTTCCGAATACAGAGCACAAACCCCGTACACAAGTACGCGGCATAATGc                                                                                                                           >  1:51913/1‑149 (MQ=255)                           tCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCa                                                                                                                          >  2:385402/1‑149 (MQ=255)                                aCGGTATTGCCCAACGTGGCCTGACCTTCACCAGCGATGACCACATGGCCGTTAAGGCGTATGCTTACTATAGTTGTCACGAGATGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCACTtat                                                                                                                     <  2:321691/149‑1 (MQ=255)                                aCGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATtat                                                                                                                     <  1:315189/149‑1 (MQ=255)                                aCGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATtat                                                                                                                     <  2:232949/149‑1 (MQ=255)                                   gTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGa                                                                                                                  <  1:188884/149‑1 (MQ=255)                                   gTATGGCCCAACGGTGCCCGACCATCACCAGCGATGCCCACAGGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTGGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGa                                                                                                                  <  2:216238/149‑1 (MQ=255)                                      ttGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATgg                                                                                                               <  2:236566/149‑1 (MQ=255)                                        tcccAACGTGGCCTGACTATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATgggg                                                                                                             <  1:217665/148‑1 (MQ=255)                                        gCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATgggg                                                                                                             <  1:46482/149‑1 (MQ=255)                                                   ccTGACCTTCACCAGCAATGAGCACCTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAg                                                                                                  <  2:107669/149‑1 (MQ=255)                                                    cTGACCGACACCAGCGATGAACACATGGCCGTTACGGCGTACGTTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAATCACGTACAAAAGGACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAgg                                                                                                 <  2:231501/149‑1 (MQ=255)                                                    cTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTGTAGATGGGGCGGATCTTGAgg                                                                                                 >  1:114711/1‑149 (MQ=255)                                                    cTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAgg                                                                                                 <  2:413049/149‑1 (MQ=255)                                                    cTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCGTACTATAGTTGTCACCAGCTGACCCCTTGATTACGAATACAGGGTACAAACCCCGTCCCAAAGTACGGGGCATAATGCAATTATACATGCGGGTGAtttgtagg                                                                                                 >  2:68973/1‑144 (MQ=255)                                                      gtctttCACCAGCGATGACCACATGGCCGTTACGGCGTACGCGTACTATAGTGGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAACCCCCATCACTAAGGACGGGGCACAATGCAATTATAGATGGGGGGGATTTTGAgggg                                                                                               <  1:376702/144‑2 (MQ=255)                                                         cATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATg                                                                                                                            <  2:230286/117‑1 (MQ=255)                                                         cATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATg                                                                                                                            >  1:230286/1‑117 (MQ=255)                                                         cATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTc                                                                                            >  1:338115/1‑149 (MQ=255)                                                           tCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGttagat                                                                                          >  2:376702/1‑145 (MQ=255)                                                           tCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCaa                                                                                          <  1:29849/149‑1 (MQ=255)                                                              gcAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCTCGTACATAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGGTTCAAccc                                                                                       >  2:321257/2‑149 (MQ=255)                                                              ccAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAAccc                                                                                       >  1:312660/1‑149 (MQ=255)                                                               cAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAg                                                                                                  >  1:287581/1‑137 (MQ=255)                                                               cAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAg                                                                                                  <  2:287581/137‑1 (MQ=255)                                                                 gCGATGACCACATGGCCGTTACGGCGTACGCTTACTCTAGTTGTCACGAGCTGACCCCGTGGTTAGGAATACAGAGTACAAACCCCGTACAAAACTACGGGGCATAATGCACTTATAGCTGGGGGCGCTTTTTAGGGTTTCAACCCCcg                                                                                    >  2:396754/1‑149 (MQ=255)                                                                        ccACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAAt                                                                                                                             >  1:331915/1‑101 (MQ=255)                                                                        ccACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAAt                                                                                                                             <  2:331915/101‑1 (MQ=255)                                                                        ccACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGa                                                                             >  1:408162/1‑149 (MQ=255)                                                                         cacaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCaa                                                                                          <  2:41677/135‑1 (MQ=255)                                                                         cacaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCaa                                                                                          >  1:41677/1‑135 (MQ=255)                                                                         cacaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAg                                                                            >  1:332648/1‑149 (MQ=255)                                                                          tcaTGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGc                                                                           <  1:122410/148‑1 (MQ=255)                                                                               gCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAAt                                                                      >  1:198007/1‑149 (MQ=255)                                                                               gCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAAt                                                                      <  2:280897/149‑1 (MQ=255)                                                                               gCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTCCAACCCCCGGCGGCGAGCCGAAt                                                                      >  1:32917/1‑149 (MQ=255)                                                                                         cGTACGCTTATCATAGTGGTCACGGGCTGCCCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCAGAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTa                                                            <  1:303995/149‑1 (MQ=255)                                                                                         cGTACGCTTACCAGAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATCCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTa                                                            <  1:366689/149‑1 (MQ=255)                                                                                         cGTACGCTCACTATAGTTGTCACGAGCTGATCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTa                                                            <  1:162484/149‑1 (MQ=255)                                                                                          gTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTAt                                                           <  2:380548/149‑1 (MQ=255)                                                                                                ttACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGAGGCGAGCCGAATGCAGATTGTATGACACg                                                     >  1:287174/1‑149 (MQ=255)                                                                                                         ttGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCa                                            >  1:41028/1‑149 (MQ=255)                                                                                                          tGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCaa                                           <  2:198007/149‑1 (MQ=255)                                                                                                            tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAAcc                                         >  1:79554/1‑149 (MQ=255)                                                                                                            tCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAAcc                                         >  1:45018/1‑149 (MQ=255)                                                                                                                gAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGAATCAACCCCCGGCGGAGAGCCGAATGCAGTTCGAATGACCCGCCATCTTCAAccaacc                                     >  1:52848/1‑145 (MQ=255)                                                                                                                gAGCGGACCCCTTGGTTACGAAAACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGAtt                                     <  1:48695/149‑1 (MQ=255)                                                                                                                 aGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTg                                    <  2:338115/149‑1 (MQ=255)                                                                                                                      aCCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCTATGATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCGGAATGCAGTTTGTATGACCCGCCATCTTCAAGCGATTGAGGGt                               >  1:227064/1‑149 (MQ=255)                                                                                                                        cccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAAGTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAACCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGc                             >  2:203111/1‑149 (MQ=255)                                                                                                                         ccTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCt                            >  2:354774/1‑149 (MQ=255)                                                                                                                           ttGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGt                          >  1:285891/1‑149 (MQ=255)                                                                                                                           ttGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGGTTCAACCCCCGGCGGCGAGCCGAATTCAGTTTGTATCGCCCGCCATCTTCAACCGATTGAGGGTCCTGt                          >  2:168559/1‑149 (MQ=255)                                                                                                                              gTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTg                       <  2:38119/149‑1 (MQ=255)                                                                                                                                   gAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTtc                  >  1:325687/1‑149 (MQ=255)                                                                                                                                   gAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTtc                  >  1:402491/1‑149 (MQ=255)                                                                                                                                       aCAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCtt              <  2:312660/149‑1 (MQ=255)                                                                                                                                           agTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGcc          >  1:55412/1‑149 (MQ=255)                                                                                                                                           agTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGcc          <  1:354774/149‑1 (MQ=255)                                                                                                                                                aaaCCCCGTACAAAAGTACGGAGCATAATCCAAATATAGATGGGGGGGATTTTGAGGGTTTCAACCCACGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATAGAGGCTGCGGTCTGCGTCCTCTTTGCCTTTCa     >  2:80914/1‑149 (MQ=255)                                                                                                                                                 aaCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCAc    >  1:50889/1‑149 (MQ=255)                                                                                                                                                 aaCCCCGTACAAAAGTACGGGGCATAATGCAAGTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGCGGGTGCTGTCTGCGGTCTCTTTGCCTTTCAc    >  2:304609/1‑149 (MQ=255)                                                                                                                                                 aaCCCCGTACAAAAGTACGGGGCATAAAAAACCACGGGATTGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGTGGGTGCTGTCTGCGGTCTCTTTGCCTTTCAc    >  2:91623/1‑149 (MQ=255)                                                                                                                                                  aCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCAcc   <  2:32917/149‑1 (MQ=255)                                                                                                                                                   ccccGTACAAAAGTACGGGGCATAGTGCAATTATAGATGGGGCGGTGATTGCGGCCTTCACACCACACCGTCTAGCCGGATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCAcac  >  2:90003/1‑147 (MQ=255)                                                                                                                                                   |                                                                                                                                                     ACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTTGTCACGAGCTGACCCCTTGGTTACGAATACAGAGTACAAACCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCG  >  NC_000913_3_pae_tpiA/4122093‑4122387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.