| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913_3_pae_tpiA | 1,978,503 | Δ776 bp | 100% | insB1–insA | insB1, insA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_tpiA | 1978503 | 1979278 | 776 | 53 [0] | [1] 55 | insB1–insA | insB1,insA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1978502 | 0 (0.000) | 47 (1.280) | 37/260 | NT | 100% | intergenic (‑305/+16) | flhD/insB1 | flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B |
| ? | NC_000913_3_pae_tpiA | 1979279 = | 0 (0.000) | intergenic (‑64/‑474) | insA/uspC | IS1 repressor TnpA/universal stress protein | |||||
TTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_tpiA/1978347‑1978502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cataaatgTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTA > NC_000913_3_pae_tpiA/1979279‑1979420 TTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAC > 1:211204/1‑149 CAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTTCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGAGGCGATTTTAAATAATGCGTGATGCAAATCAGCCGAAACAAGCAATTACTTAAAATA > 2:378466/1‑149 AAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCAAACAAAACACTCAATTACTTAAAATAA > 1:170148/1‑149 TAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAGAACACCCAATTACTTAACATAAATc > 2:74518/1‑148 AAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGCGGGGGGCTGCGATTTTCAATAATGCGTGATGCCGATCCCGCAAAACACTCATTTACTTACCATAAATGTAT > 2:384400/1‑149 ATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACGCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTGAACATAAATGTAT‑AA < 1:535799/149‑1 gcTCTTGACTCTTATCTAAGGTTTTTCCTAAATCGACGCATCTGTACTCGTCACTATACGCACATACAACGGAGGGGGGCTGCTATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTC < 2:451621/147‑1 TCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAAAACTCAATTACTTCACATAAATGTAT‑AAGTCAT > 1:416451/1‑149 TTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATAC < 1:658967/149‑1 tTCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTT < 1:635422/148‑1 ctgTAAGATTGTTCCTAAATTGACTCAAGTGTATTTGTCACTACCCGTAGATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTT < 2:103838/146‑1 TCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGAACTACAATAATGCGTTATGCAGATCACACAAAACACTCAATTACATAACAAAAATGTAT‑AAGTCATACTATTGTTTTG < 2:671226/149‑1 TCTAAGATTGTGCCTAAATCGACGCAACTGTAGCCGTCACTACACGCACATACAACGGAGGGGGGCTGCGAGTTTCAATAATGCGTGATGCAGATCACACAAAACCCTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTG < 2:221670/149‑1 AAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGAGGGCTGCGATTTTAAATAATGCGTGATGCAGATCACACCAAGAACTCAAATACTTACCATAAATGTATCAAATC‑TACTTTTGTTGTTGGT > 1:249123/1‑149 AGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACCCTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTCGGTG > 2:317290/1‑149 TTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATT > 1:162534/1‑149 CTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAAT > 1:561462/1‑149 CTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGACTGCGAATTTCAATAAAGCGTGAAGCAGAACACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTCGTTGTGGGTGTATTTCAAT > 2:573578/1‑149 TAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTAATTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCACTC > 2:127793/1‑149 TCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTT > 1:122911/1‑149 ACGCAACTGTACTCGTCACTACACGCATATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAA < 1:616076/149‑1 ACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACCTAAATGTAT‑AAGTCATACTTCTGTTTTGGATTTCTTCCAATCTCTTCAA > 2:583399/1‑149 gtAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAA < 2:243590/147‑1 AACTGTACTCGTCACTACACGCACATACAACGGCGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATCACTTAACATAAATGTAT‑AAGAAAGACTTTTGATTTGAGTTTATATCAATCTGGTAAAAAGT > 2:507954/1‑149 cgaACTCGGCGCTCCACGCCCATACATCGGAGGTGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAATCCCTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGGATTTCAATCTGTTAAAAAGTTTT < 2:441604/146‑1 GTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTT < 1:447332/149‑1 TCGTCACTACACGCACCTACAACGGAGAGGGATTGGAGAACGCATTAATCCGTGATGCAGATGACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGgt > 1:729171/1‑147 ACGCACATACAACGGAGGGGGGCTGCTATTTTCAATAATGCGTCATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAA < 1:253293/149‑1 GCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCT < 2:100312/137‑1 GCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTAAATCTGTTAAAAAGTTTTTCGCT > 1:100312/1‑137 TACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAA > 2:230311/1‑149 GGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGG < 1:83814/149‑1 GCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTACCTCCGCTAGCGAGCAAAAATTAAAAACAAATAA > 2:591819/1‑149 TGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATC > 1:176170/1‑149 CGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATCCTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGAAAGCAAAAATGAAACAGAAAGAATAGA > 1:180500/1‑149 CGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGA > 1:270916/1‑149 GATTTTCAATAATGCGTGATGCAGATCACACCAAACCCTCAACTATTTTGCTTAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAA < 1:318488/149‑1 TTCAATAAAGCGTGATGCAGATCACACAAAACACTAAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGG < 2:352572/149‑1 AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAACCAAAAATGAAACAGGAATAATCGAAATGGGAT > 2:511782/1‑149 TGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCAC > 1:599950/1‑149 TGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCAC > 1:599944/1‑149 GATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAA > 1:369519/1‑149 ATCACACAAAACACTCAATTAGTGAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAA < 2:455629/149‑1 ATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAA > 1:468688/1‑149 ATCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAAAGGGATGTTGCGCACAGTCAAAA > 1:378539/1‑149 TCACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAAT > 1:373704/1‑149 ACACAAAACACTCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAA > 2:441959/1‑149 TCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGCATAATCGAAATGGGATGTTGCGCACAGTCAAAATAAATAACCGTAAA > 2:597751/1‑149 TCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGGGCACAGTCAAAATAACTCACCGTAAA > 1:104075/1‑149 TCAATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTAACCGTAAA > 2:597810/1‑149 AATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGGGCACAGTCAAAATAACTCACCGTAAATA > 1:133784/1‑149 AATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATA > 1:441374/1‑149 AATTACTTAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAAAGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATA > 1:349333/1‑149 TAACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCT < 1:47377/149‑1 aaaATAATTGTAT‑AAGGCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGAGAACACGTAAAATAACTCACCGTAAATAATCATCTG < 2:157092/146‑1 AACATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTG > 1:80478/1‑149 ATAAATGTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCCAAATAACTCACCGTAAATAATCATCTGCTA > 2:261212/1‑149 TTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_tpiA/1978347‑1978502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cataaatgTAT‑AAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTA > NC_000913_3_pae_tpiA/1979279‑1979420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |