Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3423732–3424546	3424546	1–815	25 [24]	[24] 26	[rrfD]–[rrlD]	[rrfD],[rrlD]

CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTG  >  NC_000913_3_pae_tpiA/3424505‑3424695                                           |                                                                                                                                                     atccGTTACTCTTTAGGAGGAAACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                            >  2:356580/2‑149 (MQ=14)  tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCAGGATTACGGGTCAACGTTAGAACATCAAACATTAGAGGGTGGTATTTCAAGGTGGGCTCCATGCAGACTGGCGTCCACACTGCTaa                                           >  2:988937/1‑149 (MQ=9)   ccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGTTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                          >  2:492947/1‑149 (MQ=17)       tACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTc                                      <  1:1015296/149‑1 (MQ=32)        aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                     <  1:6490/149‑1 (MQ=32)         ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATAAAAGGGTGTTATTTCAAGTTCGGCTCCATGCAGACTGACGCCAACACTTCTATGCCTccc                                    >  1:751822/1‑149 (MQ=11)            tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATAAAAAATTAAAGGATGGTATTACAAGGTCGGCTCCATGCAGACTGGCGTCAACAATTCTAAGCCTCCCAcc                                 >  1:162984/1‑149 (MQ=11)                ggaggaGGCCGCCCCAGTCAAACTACCCAGCAGACACTGTCCGCGACCCGCATTACGGGTCGACGTTAGATCATAAAACATTAAAGAGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACATCTCAGCCCACCACGTATc                             >  1:883012/1‑149 (MQ=11)                ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc                             <  1:420520/149‑1 (MQ=32)                  aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCATCCACACTTCTAAGCCTCCCACCTATCCt                           >  1:896710/1‑149 (MQ=17)                  aggagACCGCCCCAGTCAAACTAACCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt                           >  1:315122/1‑149 (MQ=17)                   ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                          <  1:954815/149‑1 (MQ=32)                      gaCCGCCCCAGTCAAACTAACCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTacac                       <  2:315122/149‑1 (MQ=17)                            cccATTCAAACTACCCACCAGACACTGTACGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                 <  1:218442/149‑1 (MQ=17)                            cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                 >  1:953508/1‑149 (MQ=32)                            cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                 <  2:780413/149‑1 (MQ=32)                            cccAGTCAAACTACCCACCAGACAATGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATGTCAAGTTCTGCTCCATGAAGAATGGCGTCCACACTTCTCATCTTCTCACCCCTCATACACATCagg                 >  2:882918/1‑147 (MQ=11)                             ccAGTCAAACTACCCACCAGACACTGTCCGCAACCAGGATTACGGGTCAACGTTAGAACATCAAACATTACAGGGTGGTATTTCAAGGTCGGCCCCATGCAGACTGGCGTCCCCACTTCTAAGCATCCCACCTATACTAGACATAAAgg                >  2:959755/1‑149 (MQ=11)                                   aaaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                          <  2:162884/117‑1 (MQ=32)                                   aaaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                          >  1:162884/1‑117 (MQ=32)                                    aaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATg         >  2:554075/1‑149 (MQ=32)                                         cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCGAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg    <  1:630007/149‑1 (MQ=17)                                         cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg    <  1:617349/149‑1 (MQ=32)                                          ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt   <  1:994546/149‑1 (MQ=32)                                           caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTACAgtg  <  2:907384/149‑1 (MQ=17)                                           caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGATCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg  >  1:184059/1‑149 (MQ=17)                                           |                                                                                                                                                     CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTG  >  NC_000913_3_pae_tpiA/3424505‑3424695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑