| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 4,110,747 | G→T | intergenic (+62/+784) | cdh → / ← yiiQ | CDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 4,110,747 | 0 | G | T | 100.0% | 67.8 / NA | 22 | intergenic (+62/+784) | cdh/yiiQ | CDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (13/9); total (13/9) | |||||||||||
TTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCGGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATACCCGCCCCAGT > NC_000913_3_pae_tpiA/4110599‑4110892 | ttGCTGGCGACACAACGAAATCTACTGACACTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGCTAAGGCGAGGAGTTGAGGAAAGTAAGTGCCGGATATGA‑AACCCGGCACCTGTCAGACTTCGggcg > 2:297146/1‑149 (MQ=255) ccatgAAATCTTCTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCCGTGTGAGATTTTGCGTTAAGGCGAAGAGCCAAGGCAAGTAAGTGCCGGATATCA‑AATCCGGCTTCTGTCAGACTTAAGGCTGCCCCGCCGCGa < 2:420238/145‑1 (MQ=255) aaCGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAg > 2:255993/1‑149 (MQ=255) aaCGAAATCTACGGACGGTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAg < 2:158542/149‑1 (MQ=255) aCGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGc > 1:375218/1‑149 (MQ=255) cGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGGGTGAGATTTTGCGTTAAGGCGAAGAGAAACGCGAAGGAAG‑ACTGCATAAGAGATTCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCg < 1:246550/149‑1 (MQ=255) aaTCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGtt > 1:498975/1‑149 (MQ=255) cTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCa > 2:35847/1‑149 (MQ=255) aCGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGAGCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATCTGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCAAGCGGTGTAGCCCAtt > 2:310899/1‑149 (MQ=255) ttAACCGTGCTTCAGCCGAGGAAATTCAGGATCATAAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTaa < 1:223986/149‑1 (MQ=255) gATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCCCCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAAGTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCa > 1:299650/1‑149 (MQ=255) tcatcaGTGTGAGATTTTGCGTTAAGGCGACGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGACCCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAAATCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACg > 1:423803/1‑149 (MQ=255) tgAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGc < 1:322164/133‑1 (MQ=255) tgAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGc > 2:322164/1‑133 (MQ=255) cGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAaca < 1:255993/149‑1 (MQ=255) aaGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTcc > 1:88799/1‑149 (MQ=255) aaGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGt < 1:198711/149‑1 (MQ=255) gAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGGCTTTa > 2:460606/1‑149 (MQ=255) gATATGA‑AATCCGGAACCTGTCAGACTTAAGGCTGCCCCGCCGCTAGCGGTTTCGCAAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTTGTGCCGAGTTTAAGCGCGGCTTCAAc < 2:370611/149‑1 (MQ=255) atatGA‑AATCCGGCACCTGTCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACg < 1:35847/149‑1 (MQ=255) aGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGCCTTCTACGTCCTCTCCGCTCCCACTAccc > 2:87975/1‑149 (MQ=255) aCTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATACCCGc > 2:325397/1‑149 (MQ=255) ttAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCCCACTACCCGccc > 2:20216/1‑149 (MQ=255) ggctgcCCCGCCGCGGGCGGTTGCGCAAATTCTAAGCTCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCGCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATCCCCGCCCCAGt < 2:79539/149‑1 (MQ=255) | TTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGA‑AATCCGGCACCTGTCAGACTTAAGGCGGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATACCCGCCCCAGT > NC_000913_3_pae_tpiA/4110599‑4110892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |