| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 4094533 | 146 (1.770) | 7 (0.090) | 5/270 | 6.8 | 5.2% | noncoding (218/402 nt) | REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences | REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences |
| ? | NC_000913_3_pae_tpiA | = 4094595 | 118 (1.510) | noncoding (280/402 nt) | REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences | REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 149 total aligned reads displayed.
AGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAC > NC_000913_3_pae_tpiA/4094385‑4094681 | gCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaa < 1:171470/149‑1 (MQ=38) cccaCAACTATGGCCGCCCTGGAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaat < 1:105599/146‑1 (MQ=255) cTACAACTATTGCCGACCTGTAGGCCTGATGGTTGACGTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTTGGCCGGGTAAGGCACTTGTGCCGCATCCGGccatc > 2:1394475/1‑149 (MQ=11) cTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatc > 1:420710/1‑149 (MQ=38) aCAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatcaa < 1:578476/149‑1 (MQ=38) cAACTATGGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatcaat < 1:489560/149‑1 (MQ=38) aCTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGc < 1:1394475/149‑1 (MQ=38) aCTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAAAAGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGc < 1:281536/149‑1 (MQ=255) gtATGGCCGACCCGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACCGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGcc < 2:1407222/148‑1 (MQ=255) aCCTGTGGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGAc < 2:238233/149‑1 (MQ=21) aCCTGTAGGCCTGATAAAGCACTTGTGAGGCATCCGGCACTCCATGCCTCAACCA‑AATCGATGGGTTCTTGGCGGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTCTGCCGCATCCGGCGATCAATGCCTGGTGCGAc > 2:306435/1‑149 (MQ=2) tGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCACCCCGCAATCCATGCCTGCTGCGACGCt > 2:1040214/1‑149 (MQ=255) agtccTGATAAGGCATTTGCGCCGCATCCGGTCATCAATGCCTTATGCG‑ACGCGGTCCCGTCTTATCAGGCCTACAACTGTTGCCGATCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTc < 1:614628/146‑1 (MQ=11) gCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTcgc > 1:441437/1‑149 (MQ=34) ggCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTc > 2:624948/1‑143 (MQ=32) ggCACTCGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa < 1:480458/149‑1 (MQ=17) gcctttGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCCCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGTTAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg < 1:966396/145‑1 (MQ=12) gCACTTGTGCGGCATCCGGCAATGAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg < 1:966395/149‑1 (MQ=17) gCACTTGTGCCGCATCCGGCAATCAATGCCTGCCACG‑CCTCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg > 1:1071699/1‑149 (MQ=11) gcTTGTGCCGCATCTGGCAATCAAGGCCGGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTTATGCGACGCTGTCGCGTCTTATCAGGc < 2:1421226/148‑1 (MQ=255) aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc < 1:1393225/149‑1 (MQ=32) aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATCCCTGATGCGACGCTGTCGCGTCTTATCCGGc > 2:198397/1‑149 (MQ=17) aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGCCCTACAATTGGTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCCATGCCCGCGGCGACGCTGTCCCGTCCTATCAGGc > 2:527536/1‑149 (MQ=11) gcgCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAc < 1:641810/147‑1 (MQ=17) ctgCCGCATCCGACAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAc < 2:846523/148‑1 (MQ=17) ccGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAc > 1:932694/1‑149 (MQ=32) aTCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAtt > 2:910195/1‑149 (MQ=34) ccgataatcaacGCCTG‑TGCGCACGCTGGCGCGCCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGc < 1:128893/144‑1 (MQ=11) cGGCAATCAAGGCGTGATGGG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc < 2:396313/149‑1 (MQ=255) ggCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCg > 2:1139557/1‑149 (MQ=35) ggCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACCATTGCCg > 1:1171524/1‑149 (MQ=25) gtaatcaatGCCTGATGCG‑ACGCTGTCGCGTCGCATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGa < 1:541947/147‑1 (MQ=255) aatcaatGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCCATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa > 2:1363450/1‑137 (MQ=18) tcaatGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTg > 1:761376/1‑149 (MQ=37) atGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGtcg > 1:81704/1‑147 (MQ=38) ccTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGcc < 1:1352767/149‑1 (MQ=38) cTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCg > 1:967409/1‑149 (MQ=38) cTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCg < 1:218582/149‑1 (MQ=39) cTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCg < 1:1139557/149‑1 (MQ=39) tGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATg < 2:158293/97‑1 (MQ=33) tGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATg > 1:158293/1‑97 (MQ=33) cG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAg < 2:761376/149‑1 (MQ=38) cG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAg < 1:24678/149‑1 (MQ=38) g‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGc > 2:275526/1‑85 (MQ=35) gcgTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGa < 1:658566/80‑1 (MQ=35) cgTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGcc < 1:146306/149‑1 (MQ=38) tCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGc > 1:1171737/1‑149 (MQ=38) tCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCg > 1:1236240/1‑149 (MQ=39) cAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCACGCCCACAACTATTCCCGACCTGTCGGCCGGCTAAGGCGCTAGTGCCGCATcgcg > 2:1056018/1‑146 (MQ=11) aGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGc > 2:370967/1‑149 (MQ=38) ggCCTACAACTGTTACCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGca > 2:811789/1‑149 (MQ=255) ccTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGAt < 2:1211588/68‑1 (MQ=35) ccTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGCTAAGGCACTTGTGCCGCATCCGGcaat > 1:831451/1‑149 (MQ=38) cTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGccatc > 1:928146/1‑149 (MQ=38) cTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAACCAATGCCTGATGCGACGCTGTCGCGTCTTAGCAGGCCTACCACTATTTCCGACCCGGAGGCCGGATCAGGCACTTGGTCCGCCTGCGGccatg > 2:861916/1‑148 (MQ=11) tACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAt < 2:307165/101‑1 (MQ=35) tACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAt > 1:307165/1‑101 (MQ=35) tACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatca > 1:969779/1‑149 (MQ=38) cAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatcaat < 2:166219/149‑1 (MQ=38) aaCTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGCTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATg > 1:275256/1‑149 (MQ=255) aaCTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATg < 2:1302056/149‑1 (MQ=17) aCTGTGGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGc < 1:867354/149‑1 (MQ=37) cTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGcc < 1:873765/149‑1 (MQ=38) tGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaa > 1:33804/1‑48 (MQ=35) tGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTTAAGGCCGGATAAGGCCATTGTGCCGCAGCCGTCAATCAATGCCt > 1:194958/1‑149 (MQ=11) tGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGACCGGATAAGGCACTTTTGCCGCATCCGGCAATCAATGCCt > 2:794921/1‑149 (MQ=255) ttGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGa < 1:1033297/149‑1 (MQ=35) gccgccCTGTAGGCCGGATAAGGCGCTGGCGCCGCATCCGGCAATCAATGCCCGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACGATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATg < 2:1058234/149‑1 (MQ=11) gCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACGCGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCAGTCAATGCCCGATg > 2:901952/1‑149 (MQ=11) gACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa < 2:481245/149‑1 (MQ=34) gACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa < 2:1236240/149‑1 (MQ=34) aCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGAc > 1:43739/1‑149 (MQ=35) aCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGAACTTGTGCCGCATCCGGCACTCACTGCCTGATGCGAc > 1:174876/1‑149 (MQ=255) tGTAGGCCGGATCAGGCGCTTATGCCGCATCCGGCAACCACTGTTTGATTCGGCGCCACTGCGAGAAACCAATCTTACAACTATTGCCGACCCGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAGTCCATGCCTGACGCGACGCt > 2:1030399/1‑149 (MQ=2) tGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCt > 1:421628/1‑149 (MQ=35) tAGGCCGTATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATCGCCGCCCTGTAGGCTGGATAAGGCACCTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGt < 1:6821/149‑1 (MQ=11) tAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGt > 2:252661/1‑149 (MQ=35) ggCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa < 1:1228052/141‑1 (MQ=35) ccGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCg < 2:693727/95‑1 (MQ=38) ccGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCg > 1:693727/1‑95 (MQ=38) ccGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAGTCAATGCCTGATGCGACCCGGTcccg > 1:528067/1‑149 (MQ=255) ggATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAg < 1:914955/99‑1 (MQ=35) gATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAGTCAATGCCTGATGCGACCCTGTCTCctct > 2:1123525/1‑149 (MQ=255) tAAGGCACTTGGGCCGCATCCGGCAATCATTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTa < 2:1239191/149‑1 (MQ=17) ggCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa < 1:769379/149‑1 (MQ=32) tgtgCGGGATCGGGGAATCAATGCCTTATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTa < 2:204305/149‑1 (MQ=11) cgtgCCGCACCCGGGAATCAATGCCTGATGGGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTa < 2:1306958/148‑1 (MQ=12) agtgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTa > 1:223454/2‑76 (MQ=17) gtgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCACGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTCGTGCCGCATCCGGCAATCAATGCCTGCGGCTACGCTGACGCTCCTTCTCATGCCtcc > 2:601895/1‑147 (MQ=11) gcgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAc < 1:873910/147‑1 (MQ=14) ccGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAc > 1:1131425/1‑149 (MQ=32) cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCCGTAGGCCGGATAAAACACTTGTGCCGCATCCGGCAATCAATCCCAGATGCGACGCAGACGCGCCTGATCAGGCCTACacccgc > 2:339291/1‑144 (MQ=11) aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGtt < 2:1145463/149‑1 (MQ=32) tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCTATGCCTGATGCGACGCTGTCGCGTCTTTTCATGCCTACAACTGttt > 2:546626/1‑148 (MQ=12) tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTg < 1:869250/149‑1 (MQ=32) ggCAATCAATGCCTGATGCGACGCTGTCGTGTCTTATCAGGCCTACGACTATTGCCCGACTAGAGGCCGGATAATTCACTTGTGCCCCATCCGGCAATCAATGGCTGATGCGACGCTGTCGCGTCATACCACGCCTACCACTGTAGCCg > 1:1221779/1‑149 (MQ=11) ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCg > 2:429359/1‑149 (MQ=32) ggCAATCAATGCCTAATGCGACGCGGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTCCCg > 1:1251061/1‑149 (MQ=12) gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACCACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAGTCAATGCCCGCTGCGACGCTAACGCGCCTTATCAGACCTGCGACTTTTGCCgc > 2:239305/1‑148 (MQ=11) caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAc < 2:421628/149‑1 (MQ=32) | AGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCG‑ACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAC > NC_000913_3_pae_tpiA/4094385‑4094681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |