New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 3297032 =NA (NA)7 (0.140) 7/270 5.9 NA noncoding (34/84 nt) REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_pae_tpiA 4295751 = NA (NA)noncoding (1/600 nt) RIP321 (repetitive extragenic palindromic) element; contains 11 REP sequences and 4 IHF sites RIP321 (repetitive extragenic palindromic) element; contains 11 REP sequences and 4 IHF sites
Rejected: Coverage evenness skew score above cutoff.

TGGTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGG  >  NC_000913_3_pae_tpiA/3296890‑3297178
                                                                                                                                              |                                                                                                                                                  
gggTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAc                                                                                                                                              <  1:330958/148‑1 (MQ=255)
   tGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAt                                                                                                                                           <  2:798117/149‑1 (MQ=255)
   tGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAt                                                                                                                                           <  2:848149/149‑1 (MQ=255)
     aCTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCATGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAtcc                                                                                                                                         >  1:923858/1‑147 (MQ=255)
         tactttaaGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc                                                                                                                                     >  2:719399/7‑149 (MQ=255)
            gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTTCAACGATACAAACCGt                                                                                                                                  >  1:270060/1‑149 (MQ=255)
            gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGt                                                                                                                                  >  2:844890/1‑149 (MQ=255)
             tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTa                                                                                                                                 <  2:452512/149‑1 (MQ=255)
             tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTa                                                                                                                                 <  1:852327/149‑1 (MQ=255)
             tGAAGCGAAAGCGGCGGAAGATATGGCCAGCCGGGTTAGCGGCGTGAAGCGGGTAACTACTGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCCACGCTTGCCGCGTCTTATCATGCCTACAACGATACAAACCGTa                                                                                                                                 <  1:698479/149‑1 (MQ=39)
               aaGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCCTAgg                                                                                                                               >  2:328282/1‑149 (MQ=255)
               aaGCGAAAGCGGCCGCAGATATTGCCAGCCGTGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg                                                                                                                               <  1:746729/149‑1 (MQ=255)
                 gCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGACGCGGCTGCCTACTGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTc                                                                                                                             <  1:27225/149‑1 (MQ=39)
                 gCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAATTAGCAGCCCCTTGTAAGGCCCGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTc                                                                                                                             <  2:866170/149‑1 (MQ=255)
                    aaaGCGGCGGCCGATATTGCCAGCCGGGTGGGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGa                                                                                                                          <  2:313620/149‑1 (MQ=255)
                        cggcggCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAg                                                                                                                      <  1:506556/149‑1 (MQ=255)
                              gaGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTAAGATAAGGCGttt                                                                                                                >  2:866657/2‑149 (MQ=255)
                              cAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTCTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAg                                                                                                                                >  2:900312/1‑133 (MQ=255)
                              cAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAATCGTAGGTCAGATAAGGCGttt                                                                                                                >  1:821868/1‑149 (MQ=255)
                              cAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAg                                                                                                                                <  1:900312/133‑1 (MQ=255)
                               aGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTAAGATAGGGCGTTTa                                                                                                               >  1:510230/1‑149 (MQ=255)
                                gATATTGCCAGGCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAc                                                                                                              <  1:395979/149‑1 (MQ=255)
                                 atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGAGCCGCTTTACACATCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcg                                                                                                             >  1:455084/1‑149 (MQ=255)
                                  tatTTCCAACCGGGTGAGCAGCGGGAAGCAGGTAAATACCGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgc                                                                                                            <  1:5279/149‑1 (MQ=38)
                                  tatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgc                                                                                                            <  2:122505/149‑1 (MQ=255)
                                   atTGCCAGCCGGGTGAGCGGCGTGACGCGGGTAACTACGGCGTTTACGTTTGTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGTCCTACAACGATACAAACCGTAGGTCAGATAAGGCCATTAcgcc                                                                                                           >  2:287599/1‑149 (MQ=39)
                                   agtGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgcc                                                                                                           <  1:745982/147‑1 (MQ=255)
                                     tGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTAAGTTTAATAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATGCACACCGTAGGTCAGATAAGGCGTTTTccccgc                                                                                                         >  2:337461/1‑149 (MQ=37)
                                              ggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACAt                                                                                                >  1:291387/1‑149 (MQ=255)
                                                tGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGt                                                                                              <  1:530784/149‑1 (MQ=255)
                                                 gAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGtt                                                                                             >  2:455233/1‑149 (MQ=255)
                                                   gcggcgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATCAGGCGTTTACGCCGCATCCGACATGtttt                                                                                           <  1:792669/149‑1 (MQ=255)
                                                     ggcgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTcc                                                                                         >  1:493767/1‑149 (MQ=255)
                                                            aGCGGGTACCTACGGCGTTTACGTTTATTAAATCGCAGCCCCTTGTAATGCCTGATTCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAt                                                                                  <  1:599051/149‑1 (MQ=255)
                                                                ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACACACCGTAGGTCAGATATGGCGTTTACGCCGCATCCGACATGTCTTCCCTCAAATCAGa                                                                              >  1:439374/1‑149 (MQ=255)
                                                                ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGa                                                                              <  1:700557/149‑1 (MQ=255)
                                                                 gTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGTGACGCTTGCCGCGTCTTCTCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGaa                                                                             <  1:863868/149‑1 (MQ=255)
                                                                 gTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACCAACCGTAGGTCAGAGAAGGCGTTTACACCGCCTCCGACATGTTTTCCCTCAAATCAGaa                                                                             >  1:708720/1‑149 (MQ=255)
                                                                 gTAACCACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGGCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGaa                                                                             <  1:457982/149‑1 (MQ=255)
                                                                    aCTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGaacaa                                                                          <  1:487088/149‑1 (MQ=255)
                                                                      tACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAacaaca                                                                        >  1:759414/1‑149 (MQ=255)
                                                                        cGGCGTTTACGTTTATTAAATAGCAGCACCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATAAGACAAACAgc                                                                      >  1:324386/1‑149 (MQ=255)
                                                                                  gtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCccgc                                                            >  1:602780/1‑149 (MQ=255)
                                                                                          aaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCATCCCGCCGACACTc                                                    >  2:565658/1‑149 (MQ=255)
                                                                                          aaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCccgccgcacatc                                                    >  2:471367/1‑143 (MQ=255)
                                                                                          aaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGATCACAACCGTAGGTCAGATACGGCGTTTACGCCGCATCCGCCTTGTTTTCCCTCCAATCAAAACCCCACCCCCGGCCCGGCcacacct                                                    >  2:733211/1‑146 (MQ=18)
                                                                                              gcagcCCTTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAAATAGGCACAAAGCTTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCacac                                                <  1:455233/149‑1 (MQ=37)
                                                                                                    ccTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGACGACAATCACACCaccca                                          >  2:659348/1‑145 (MQ=255)
                                                                                                    ccTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTGTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGaca                                          >  2:587094/1‑149 (MQ=255)
                                                                                                      ttGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGGACAACAGCGCCAGCCCGCCGACAATCACACCAGACACt                                        <  2:821868/149‑1 (MQ=255)
                                                                                                         tAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGcc                                     <  2:291387/149‑1 (MQ=255)
                                                                                                          aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGcca                                    <  2:923858/149‑1 (MQ=255)
                                                                                                           aTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGccac                                   >  1:677605/1‑149 (MQ=255)
                                                                                                             gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCaaa                                                                                   <  2:4614/99‑1 (MQ=255)
                                                                                                             gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCaaa                                                                                   >  1:4614/1‑99 (MQ=255)
                                                                                                                           ttGCCGCGTCTTATGAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGc                   <  2:323991/149‑1 (MQ=255)
                                                                                                                                gcgTCTTATCAGGCCTACAATGATCCAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATaa              <  1:196130/149‑1 (MQ=255)
                                                                                                                                        tCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACCCCAGACACTGCCACCATCGCCCCTGTCAGCCATAGGGCTTTCg      >  1:480424/1‑149 (MQ=255)
                                                                                                                                           ggCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAAGCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCg   <  2:759414/149‑1 (MQ=255)
                                                                                                                                           ggCCTACAACGATACAAACCGTAGGTCAGAGAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACCCTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCg   <  1:659348/149‑1 (MQ=255)
                                                                                                                                            gCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCgg  <  1:471367/149‑1 (MQ=255)
                                                                                                                                            gCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCAACCACCGCCCCTGTCAGCCATAAGGCTTTCGCCgg  >  2:726222/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                  
TGGTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGG  >  NC_000913_3_pae_tpiA/3296890‑3297178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.